G20217 (LOC107601298,LOC107721528,LOC107590427,LOC107720013,LOC107688135,LOC107654518)


Basic Information

Item Value
gene id G20217
gene name LOC107601298,LOC107721528,LOC107590427,LOC107720013,LOC107688135,LOC107654518
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056701.1
NCBI id CM032070.1
chromosome length 30200998
location 14449475 ~ 14451028 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU30097
CCTGTTTCAGCCCCAGGGGCGGGAGGAGCTCCTGGAGGGCGGGGTGGTCCACAGCCAGGTGGGGGCGGGGTGGTGGAGGACCTCCACCAGgaaggggaggaggaggaggaggtggaatACCTCCACAtccaggaggaggaggtggtggtggaggaggtggGGGTGGAGGTGGTACTGCTGAGGCTGAAGGGGGCGGAGCTTGAGAAGCTGGATCTGACACAGCCACTGTTGATTGATGATTTTTCCACAGTGACTGGAATCACTTCGATGTCCAAGCTTCCAGAGGTTGTGCGCTCCAGTCGGACTAATCCTTTCTCCTCCAGTTCCTTCAGCTTGGCCTCCAGTTTGGACTCTGTCTcactgtttctttttctgtctacCTGTGAGGGCTGTGACAGACGctcctgctctctttctctctctctctgaatctCTCGTTCTCGTTCTCTCTGCTGCAAAGTGCTCACTTGGGCACAGGACTCTCGCAAGC

Function

NR:

description
PREDICTED: formin-like protein 1 isoform X2

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU30097 True 490 lncRNA 0.58 3 14449475 14451028

Neighbor

gene id symbol gene type direction distance location
tubg1 tubg1,LOC107721485 coding downstream 33878 14404974 ~ 14415597 (-)
cntnap1 cntnap1,LOC107721486,LOC107654512,LOC107720006,LOC107601289,LOC107590375,LOC107688128 coding downstream 93487 14328206 ~ 14355988 (-)
ramp2 LOC107654510,LOC107721488,LOC107601292,LOC107590449 coding downstream 140034 14303150 ~ 14309441 (-)
abcc6b.2 abcc6b.2,LOC107721491,LOC107590377,LOC107720004,LOC107688123,LOC107601225,LOC108437999 coding downstream 156532 14273386 ~ 14292943 (-)
myh11b myh11b,myh11,LOC107654508,LOC107721492,LOC107601223,LOC107590431 coding downstream 196526 14239107 ~ 14252949 (-)
LOC122341422 LOC107654457,LOC107601299,LOC107720081,LOC107688136,LOC107721482 coding upstream 8794 14459822 ~ 14462247 (-)
LOC122341419 LOC107601299,LOC107721482,LOC107654457,LOC107688136,LOC107720081,LOC107590425 coding upstream 11219 14462247 ~ 14556085 (-)
arf2a arf2a,arf2b,LOC103045652,LOC108427419,LOC105013206,LOC107554546 coding upstream 122734 14573762 ~ 14581763 (-)
gpatch8 LOC107721478,LOC107654521,LOC107674594,LOC107601302,LOC107720016 coding upstream 159233 14610261 ~ 14641128 (-)
baxa baxa,LOC107601305,LOC107721480,LOC107674732,LOC107720019 coding upstream 206702 14657730 ~ 14664833 (-)
G20202 NA non-coding downstream 61077 14385361 ~ 14388398 (-)
G20095 LOC107719998,LOC107601286,LOC107688145,LOC107590379 non-coding downstream 227678 14220085 ~ 14221797 (-)
G20029 zgc:86896,LOC107654493,LOC107721506,LOC107590453,LOC107719989,LOC107601274 non-coding downstream 388983 14059581 ~ 14060492 (-)
LOC122342150 NA non-coding downstream 519198 13917700 ~ 13930277 (-)
G19947 NA non-coding downstream 550543 13897631 ~ 13898932 (-)
G20231 NA non-coding upstream 152166 14603194 ~ 14604214 (-)
G20230 LOC107674595,LOC107720017,LOC107721479,LOC107601304,LOC107654524,LOC107590367 non-coding upstream 154001 14605029 ~ 14657481 (-)
G20233 asic2,LOC107720021,LOC107654528,LOC107601227,LOC107674665,LOC107720082,LOC107590422 non-coding upstream 181186 14632214 ~ 14687436 (-)
G20225 NA non-coding upstream 214886 14665914 ~ 14671569 (-)
G20245 asic2,LOC107674665,LOC107737939,LOC107590420,LOC107654528,LOC102794937 non-coding upstream 398689 14849717 ~ 14851862 (-)
mlx mlx,LOC107601295,LOC107721525,LOC107720011,LOC107590371,LOC107688133,LOC107654516 other downstream 9934 14435147 ~ 14439541 (-)
si:dkeyp-72e1.6 si:dkeyp-72e1.6,LOC107721468,LOC108274424,LOC108438007,LOC103040592 other downstream 245125 14202930 ~ 14204350 (-)
G19933 NA other downstream 643497 13805368 ~ 13805978 (-)
gng13b NA other downstream 656873 13786009 ~ 13792602 (-)
G19676 LOC107690708 other downstream 1381285 13005996 ~ 13068190 (-)
plcd3a plcd3,plcd3a,LOC107591554,LOC107581738,LOC107738025,LOC107654535,LOC107674588,LOC108432051,LOC106607244 other upstream 669778 15120806 ~ 15179359 (-)
LOC122341947 NA other upstream 690789 15141817 ~ 15145608 (-)
atp5mf atp5j2,LOC107703422,LOC107720056,LOC107737688,LOC107591715,LOC107674607,LOC107578700 other upstream 1147742 15598770 ~ 15600348 (-)
G20680 LOC101886504,LOC101886427 other upstream 2000112 16451140 ~ 16451800 (-)
LOC122341847 NA other upstream 2002046 16453074 ~ 16455479 (-)

Expression


Co-expression Network