XLOC_006834 (zgc:152791)


Basic Information

Item Value
gene id XLOC_006834
gene name zgc:152791
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007124.7
NCBI id CM002897.2
chromosome length 52186027
location 37617518 ~ 37620290 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00013146
GTTACAGCCGCCGTAGCTGTCGCAGGAGGAGCCGGAGCAATTGCTGCAGCTCCTGTAGTTCTAACAGCTGTAGGTTTCACTGGAGCTGGAATTGCTGCGGGTTCGATTGCCTCCTCAATGATGTCAGCTGCTGCTGTAGCAAACGGAGGAGGAGTTGCGGCTGGATCAGTGGTAGCAGGTCTTCAAGCAGCTGgtgCTGCTGGAATCCCTGCCGCAGCTCAGGCTGTTATTGGTGGCATAGGGGCTGCGGCTAGCACTCTTGGGTGGTTTGCTCTTATTTAGATTGTTCTTCAGTAGCTGCAGGTGAAGCCATACAGTAATCATAAGTATTGAATAGTTTTTGTTGTAACATTTTTTGTAACTATAAAATTGAAAAGCCATAACTACAGCATCTGAGAAACTGATTTGAAAATAAGTTTTGTTATAATTTGTCATTAGGTGCTGCAGCAGGCGAAGCCAGAACTGTGGAAGTCGCTGTGAGAATAGTTGATACTGCCTGACATGCCCTTCACTATATGataaatttctatttatttaatcaaacataTAGCATTTAACTAATCCACAGCCATAAATGTAGACATGTACTAACTCCttcaaaatattacaataaatctATATTTCTTCACCTTTTACTTTAAACTTGTACTACAAATATTATTTGCTCTTGTTATAAGTTGTgtggtaaaacaaaacaatatcttCTTTTAAGCAAGATGAGATTCAAATCCTATCTTAAGATGAGAGTTTTGTTTCTTGTCTTGGTAAATGTTTTGgaactgttaaaaataaatcaataaataaattgattacattttttgGTAAAGT
>TCONS_00013147
ACTGAAAATGGGTCTACTTACAGCCGCCGTAGCTGTCGCAGGAGGAGCCGGAGCAATTGCTGCAGCTCCTGTAGTTCTAACAGCTGTAGGTTTCACTGGAGCTGGAATTGCTGCGGGTTCGATTGCCTCCTCAATGATGTCAGCTGCTGCTGTAGCAAACGGAGGAGGAGTTGCGGCTGGATCAGTGGTAGCAGGTCTTCAAGCAGCTGgtgCTGCTGGAATCCCTGCCGCAGCTCAGGCTGTTATTGGTGGCATAGGGGCTGCGGCTAGCACTCTTGGGTGGTTTGCTCTTATTTAGATTGTTCTTCAGTAGCTGCAGGTGAAGCCATACAGTAATCATAAGTATTGAATAGTTTTTGTTGTAACATTTTTTGTAACTATAAAATTGAAAAGCCATAACTACAGCATCTGAGAAACTGATTTGAAAATAAGTTTTGTTATAATTTGTCATTAGGTGCTGCAGCAGGCGAAGCCAGAACTGTGGAAGTCGCTGTGAGAATAGTTGATACTGCCTGACATGCCCTTCACTATATGataaatttctatttatttaatcaaacataTAGCATTTAACTAATCCACAGCCATAAATGTAGACATGTACTAACTCCttcaaaatattacaataaatctATATTTCTTCACCTTTTACTTTAAACTTGTACTACAAATATTATTTGCTCTTGTTATAAGTTGTgtggtaaaacaaaacaatatcttCTTTTAAGCAAGATGAGATTCAAATCCTATCTTAAGATGAGAGTTTTGTTTCTTGTCTTGGTAAATGTTTTGgaactgttaaaaataaatcaataaataaattgattacattttttgGTAAA
>TCONS_00013148
AGCAAACGTCGCTGCAGGTCTAACATTTGCTATAGTTCTTACATTCGTCTAACATCTAGCCTATCTGAATTCATTCAGTTCAAACCCCAAGACTCTACTGAAAATGGGTCTACTTACAGCCGCCGTAGCTGTCGCAGGAGGAGCCGGAGCAATTGCTGCAGCTCCTGTAGTTCTAACAGCTGTAGGTTTCACTGGAGCTGGAATTGCTGCGGGTTCGATTGCCTCCTCAATGATGTCAGCTGCTGCTGTAGCAAACGGAGGAGGAGTTGCGGCTGGATCAGTGGTAGCAGGTCTTCAAGCAGCTGgtgCTGCTGGAATCCCTGCCGCAGCTCAGGCTGTTATTGGTGGCATAGGGGCTGCGGCTAGCACTCTTGGGTGGTTTGCTCTTATTTAGATTGTTCTTCAGTAGCTGCAGGTGCTGCAGCAGGCGAAGCCAGAACTGTGGAAGTCGCTGTGAGAATAGTTGATACTGCCTGACATGCCCTTCACTATATGataaatttctatttatttaatcaaacataTAGCATTTAACTAATCCACAGCCATAAATGTAGACATGTACTAACTCCttcaaaatattacaataaatctATATTTCTTCACCTTTTACTTTAAACTTGTACTACAAATATTATTTGCTCTTGTTATAAGTTGTgtggtaaaacaaaacaatatcttCTTTTAAGCAAGATGAGATTCAAATCCTATCTTAAGATGAGAGTTTTGTTTCTTGTCTTGGTAAATGTTTTGgaactgttaaaaataaatcaataaataaattgattacattttttgGTAAA
>TCONS_00013149
ttagtcttagtttctgattttgtttactaaaatacCATTGTCGCCAACAGCCGGAGCAATTGCTGCAGCTCCTGTAGTTCTAACAGCTGTAGGTTTCACTGGAGCTGGAATTGCTGCGGGTTCGATTGCCTCCTCAATGATGTCAGCTGCTGCTGTAGCAAACGGAGGAGGAGTTGCGGCTGGATCAGTGGTAGCAGGTCTTCAAGCAGCTGgtgCTGCTGGAATCCCTGCCGCAGCTCAGGCTGTTATTGGTGGCATAGGGGCTGCGGCTAGCACTCTTGGGTGGTTTGCTCTTATTTAGATTGTTCTTCAGTAGCTGCAGGTGAAGCCATACAGTAATCATAAGTATTGAATAGTTTTTGTTGTAACATTTTTTGTAACTATAAAATTGAAAAGCCATAACTACAGCATCTGAGAAACTGATTTGAAAATAAGTTTTGTTATAATTTGTCATTAGGTGCTGCAGCAGGCGAAGCCAGAACTGTGGAAGTCGCTGTGAGAATAGTTGATACTGCCTGACATGCCCTTCACTATATGataaatttctatttatttaatcaaacataTAGCATTTAACTAATCCACAGCCATAAATGTAGACATGTACTAACTCCttcaaaatattacaataaatctATATTTCTTCACCTTTTACTTTAAACTTGTACTACAAATATTATTTGCTCTTGTTATAAGTTGTgtggtaaaacaaaacaatatcttCTTTTAAGCAAGATGAGATTCAAATCCTATCTTAAGATGAGAGTTTTGTTTCTTGTCTTGGTAAATGTTTTGgaactgttaaaaataaatcaataaataaattgattacattttttgGT

Function

GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDARG00000039243

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00013146 False 828 mRNA 0.38 3 37617518 37620091
TCONS_00013147 False 842 mRNA 0.38 4 37617520 37620194
TCONS_00013148 False 803 mRNA 0.41 5 37617520 37620290
TCONS_00013149 True 842 mRNA 0.37 2 37617523 37619159

Neighbor

gene id symbol gene type direction distance location
XLOC_006833 si:dkey-188i13.6 coding downstream 2489 37609458 ~ 37615029 (-)
XLOC_006832 ifi45 coding downstream 9077 37605896 ~ 37608441 (-)
XLOC_006831 snapc1b coding downstream 16918 37586491 ~ 37600600 (-)
XLOC_006830 syt16 coding downstream 72031 37543498 ~ 37545487 (-)
XLOC_006829 NA coding downstream 81733 37528161 ~ 37535785 (-)
XLOC_006835 ifi46 coding upstream 2986 37623276 ~ 37631092 (-)
XLOC_006836 NA coding upstream 12336 37632626 ~ 37636598 (-)
XLOC_006837 si:dkey-188i13.9 coding upstream 18468 37638758 ~ 37642901 (-)
XLOC_006838 si:dkey-188i13.10 coding upstream 25282 37645572 ~ 37649595 (-)
XLOC_006839 si:dkey-188i13.11 coding upstream 30383 37650673 ~ 37656690 (-)
XLOC_006471 BX537274.2 misc downstream 27352613 10264741 ~ 10264905 (-)
XLOC_006338 rn7sk misc downstream 36791293 825904 ~ 826225 (-)
XLOC_006819 AL845493.1 non-coding downstream 438802 37178602 ~ 37178716 (-)
XLOC_006817 NA non-coding downstream 506982 37110212 ~ 37110536 (-)
XLOC_006815 NA non-coding downstream 605282 37009812 ~ 37012236 (-)
XLOC_006814 NA non-coding downstream 619758 36995633 ~ 36997760 (-)
XLOC_006842 NA non-coding upstream 570231 38190521 ~ 38195214 (-)
XLOC_006843 NA non-coding upstream 992935 38613225 ~ 38619719 (-)
XLOC_006846 BX323574.1 non-coding upstream 1232847 38853137 ~ 38853252 (-)
XLOC_006848 BX324188.2 non-coding upstream 1622265 39242555 ~ 39242672 (-)

Expression


Co-expression Network