G20630


Basic Information

Item Value
gene id G20630
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056701.1
NCBI id CM032070.1
chromosome length 30200998
location 16214600 ~ 16216244 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU30682
TTGAAAATTGGCCAGTGGGCAGAGCTTTCACAGTGGAAGCCTCTTTTCTTCTGTCCTGTGAGAACATCCCAGATGATGATGGCCTGTGGGTCATCTTTAGTGTCCATAAGAGGGCTGAATGTGACCAATACCTCTCACAGGGTGAGAAATCAATTAGCTGAACCCCCTGATGACTGAACCTCTGGATCTGCTTGAACTTCTCGCCGGCCCAGAGAGCGATGCCTCTCTGATGGAATGTGGCCAGATAGGTGCCTTTTGGAGACCAGCGCACGTATGTTTCGGTCCAGCGC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU30682 True 290 lncRNA 0.51 2 16214600 16216244

Neighbor

gene id symbol gene type direction distance location
sdk1a sdk1a,LOC107703405,LOC107591833,LOC107674633 coding downstream 81442 15888140 ~ 16133158 (-)
LOC122333178 cyp3c3,LOC107703407,LOC107748444,LOC107720069,LOC107581712,LOC107703406 coding downstream 327332 15880475 ~ 15887268 (-)
LOC122333197 cyp3c4,cyp3c3,LOC107703406,LOC107581712,LOC107703407,LOC107748444,LOC107748668,LOC107720069 coding downstream 335147 15873998 ~ 15879453 (-)
foxk1 foxk1,LOC107748300,LOC107581713,LOC107720067,LOC107674632 coding downstream 342416 15857834 ~ 15872184 (-)
ap5z1 ap5z1,LOC107748036,LOC107703412,LOC107720065,LOC107674701 coding downstream 357931 15843615 ~ 15856669 (-)
LOC122341827 LOC107703344,LOC107753612,LOC101883165,LOC107592774,LOC107581787,LOC107674625,LOC107758329 coding upstream 21560 16237804 ~ 16241590 (-)
grifin grifin,LOC107758328,LOC107592780,LOC107592523 coding upstream 27409 16243653 ~ 16245403 (-)
ttyh3a ttyh3a,LOC107581706,LOC107591862,LOC107703399 coding upstream 92177 16308421 ~ 16357532 (-)
nudt1 nudt1,LOC107703398,LOC107592807,LOC107758325,LOC107674605 coding upstream 152629 16368873 ~ 16372439 (-)
LOC122341848 LOC101886504,LOC101886427 coding upstream 233310 16449554 ~ 16451043 (-)
G20624 gna12,LOC107703403,LOC107758336,LOC107753491,LOC107592501,LOC107674729 non-coding downstream 6781 16205369 ~ 16207819 (-)
G20571 NA non-coding downstream 392655 15821219 ~ 15821945 (-)
G20546 NA non-coding downstream 576988 15635072 ~ 15637612 (-)
G20363 NA non-coding downstream 848149 15366136 ~ 15366451 (-)
G20338 aldoaa,LOC107581735,LOC107720037,LOC107674678,LOC102778271,LOC103381979 non-coding downstream 881114 15280347 ~ 15333486 (-)
G20627 NA non-coding upstream 2002 16218246 ~ 16219257 (-)
G20643 NA non-coding upstream 53440 16269684 ~ 16269908 (-)
G20645 NA non-coding upstream 56035 16272279 ~ 16272524 (-)
G20717 NA non-coding upstream 474921 16691165 ~ 16699422 (-)
G20752 NA non-coding upstream 566960 16783204 ~ 16783825 (-)
atp5mf atp5j2,LOC107703422,LOC107720056,LOC107737688,LOC107591715,LOC107674607,LOC107578700 other downstream 614252 15598770 ~ 15600348 (-)
plcd3a plcd3,plcd3a,LOC107591554,LOC107581738,LOC107738025,LOC107654535,LOC107674588,LOC108432051,LOC106607244 other downstream 1035241 15120806 ~ 15179359 (-)
LOC122341947 NA other downstream 1068992 15141817 ~ 15145608 (-)
mlx mlx,LOC107601295,LOC107721525,LOC107720011,LOC107590371,LOC107688133,LOC107654516 other downstream 1775059 14435147 ~ 14439541 (-)
si:dkeyp-72e1.6 si:dkeyp-72e1.6,LOC107721468,LOC108274424,LOC108438007,LOC103040592 other downstream 2010250 14202930 ~ 14204350 (-)
G20680 LOC101886504,LOC101886427 other upstream 234896 16451140 ~ 16451800 (-)
LOC122341847 NA other upstream 236830 16453074 ~ 16455479 (-)
mafk mafk,LOC107703391,LOC107674662 other upstream 499477 16715721 ~ 16729689 (-)
uncx uncx,LOC107703385,LOC107674712,LOC107568937,LOC107745590 other upstream 646481 16862725 ~ 16873987 (-)
snn snn,LOC107564698,LOC107703342 other upstream 822943 17039187 ~ 17042414 (-)

Expression


Co-expression Network