G20643


Basic Information

Item Value
gene id G20643
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056701.1
NCBI id CM032070.1
chromosome length 30200998
location 16269684 ~ 16269908 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU30695
gaaaattttgtcattattcactTATCCCTAAGAAAACCtttcttcatcttcagaacacaatttaaaatgaccttgAGTTTTGTGACTGCCAAGTAACGAACATTGTGAAGTCACTGAAAGACGGTTCAACTCAATGGTTCAACTGTAACATTATGAAGtgatgagaatactttttgttttttcgttATAAAGTTTTCTTAATGCATGTAGTCTGACAATAATGCC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU30695 True 225 lncRNA 0.32 1 16269684 16269908

Neighbor

gene id symbol gene type direction distance location
grifin grifin,LOC107758328,LOC107592780,LOC107592523 coding downstream 24281 16243653 ~ 16245403 (-)
LOC122341827 LOC107703344,LOC107753612,LOC101883165,LOC107592774,LOC107581787,LOC107674625,LOC107758329 coding downstream 28094 16237804 ~ 16241590 (-)
sdk1a sdk1a,LOC107703405,LOC107591833,LOC107674633 coding downstream 136526 15888140 ~ 16133158 (-)
LOC122333178 cyp3c3,LOC107703407,LOC107748444,LOC107720069,LOC107581712,LOC107703406 coding downstream 382416 15880475 ~ 15887268 (-)
LOC122333197 cyp3c4,cyp3c3,LOC107703406,LOC107581712,LOC107703407,LOC107748444,LOC107748668,LOC107720069 coding downstream 390231 15873998 ~ 15879453 (-)
ttyh3a ttyh3a,LOC107581706,LOC107591862,LOC107703399 coding upstream 38513 16308421 ~ 16357532 (-)
nudt1 nudt1,LOC107703398,LOC107592807,LOC107758325,LOC107674605 coding upstream 98965 16368873 ~ 16372439 (-)
LOC122341848 LOC101886504,LOC101886427 coding upstream 179646 16449554 ~ 16451043 (-)
elfn1a elfn1,elfn1a,LOC107703384,LOC107674694,LOC107572165 coding upstream 272440 16542348 ~ 16629156 (-)
axin1 axin1,LOC107727128,LOC107703383,LOC107745589,LOC107674664 coding upstream 688054 16957962 ~ 16998780 (-)
G20627 NA non-coding downstream 50427 16218246 ~ 16219257 (-)
G20630 NA non-coding downstream 53440 16214600 ~ 16216244 (-)
G20624 gna12,LOC107703403,LOC107758336,LOC107753491,LOC107592501,LOC107674729 non-coding downstream 61865 16205369 ~ 16207819 (-)
G20571 NA non-coding downstream 447739 15821219 ~ 15821945 (-)
G20546 NA non-coding downstream 632072 15635072 ~ 15637612 (-)
G20645 NA non-coding upstream 2371 16272279 ~ 16272524 (-)
G20717 NA non-coding upstream 421257 16691165 ~ 16699422 (-)
G20752 NA non-coding upstream 513296 16783204 ~ 16783825 (-)
G20753 NA non-coding upstream 515082 16784990 ~ 16785208 (-)
LOC122341878 NA non-coding upstream 604756 16874664 ~ 16876081 (-)
atp5mf atp5j2,LOC107703422,LOC107720056,LOC107737688,LOC107591715,LOC107674607,LOC107578700 other downstream 669336 15598770 ~ 15600348 (-)
plcd3a plcd3,plcd3a,LOC107591554,LOC107581738,LOC107738025,LOC107654535,LOC107674588,LOC108432051,LOC106607244 other downstream 1090325 15120806 ~ 15179359 (-)
LOC122341947 NA other downstream 1124076 15141817 ~ 15145608 (-)
mlx mlx,LOC107601295,LOC107721525,LOC107720011,LOC107590371,LOC107688133,LOC107654516 other downstream 1830143 14435147 ~ 14439541 (-)
si:dkeyp-72e1.6 si:dkeyp-72e1.6,LOC107721468,LOC108274424,LOC108438007,LOC103040592 other downstream 2065334 14202930 ~ 14204350 (-)
G20680 LOC101886504,LOC101886427 other upstream 181232 16451140 ~ 16451800 (-)
LOC122341847 NA other upstream 183166 16453074 ~ 16455479 (-)
mafk mafk,LOC107703391,LOC107674662 other upstream 445813 16715721 ~ 16729689 (-)
uncx uncx,LOC107703385,LOC107674712,LOC107568937,LOC107745590 other upstream 592817 16862725 ~ 16873987 (-)
snn snn,LOC107564698,LOC107703342 other upstream 769279 17039187 ~ 17042414 (-)

Expression


Co-expression Network