LOC122341847


Basic Information

Item Value
gene id LOC122341847
gene name NA
gene type misc
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056701.1
NCBI id CM032070.1
chromosome length 30200998
location 16453074 ~ 16455479 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU30749
tggtgttgcctttgtaatatttaatgtttaatgaccaAATTATTTTCGTTGTTTAtgggggacttttattttgaaacaaaacccGCTTTTCACAACGCACGGCGCTAAAGAGAAAAGGGGAATGGGAGAGTGAACGCTTCATGACGGCTTAAAACTCGTTCACGAAAGAGATGTAACAAGTTTATTTAGCAACCCCCCGAAAAGGCATAAGCTCTTACGGTGATTTCTGAAGACGAAagggaacagaaataaaagtctggAAACATCAGTAAAAGTTTCGGCCATCATTCGGACGGGGTCCGCTACAGTAAGAGCTTTACCTTCGCTGGTTCAGATCCTCGCCGCACGTGCTGACAGACGGATTCAACGTGACTAAAGGAAAATGGATGGCAGTACGTCAGAATCAGCGTGATGGTCTACGGAGCTGCGACGCTGTGCTGTAGTCGGCAAGTTAAGTATGGAAATTGAAACAGAAGAACAAATAACTGGAAGCCTGcttcagacagagacagaaaaggaa
>XM_043235516.1
GGCTTTAATAagagttaattttaatttattttgtttggtgttgcctttgtaatatttaatgtttaatgaccaAATTATTTTCGTTGTTTAtgggggacttttattttgaaacaaaacccGCTTTTCACAACGCACGGCGCTAAAGAGAAAAGGGGAATGGGAGAGTGAACGCTTCATGACGGCTTAAAACTCGTTCACGAAAGAGATGTAACAAGTTTATTTAGCAACCCCCCGAAAAGGCATAAGCTCTTACGGTGATTTCTGAAGACGAAagggaacagaaataaaagtctggAAACATCAGTAAAAGTTTCGGCCATCATTCGGACGGGGTCCGCTACAGTAAGAGCTTTACCTTCGCTGGTTCAGATCCTCGCCGCACGTGCTGACAGACGGATTCAACGTGACTAAAGGAAAATGGATGGCAGTACGTCAGAATCAGCGTGATGGTCTACGGAGCTGCGACGCTGTGCTGTAGTCGGCAAGTTAAGTATGGAAATTGAAACAGAAGAACAAATAACTGGAAGCCTGcttcagacagagacagaaaaggaaagggATCTAAATGGAGCGGATAAAGATAAAATTGCTGCAGAACGCCAGTGTCATGTACAAGACAGTGCAGAACTCCCTCGACGTTCCGAACGTACTTGTATGCCTACGGAGAAAATGCTTGCTTATCAGAAAGATGAATgctgtaagaaagaaaaaaggttaaTAACTTTGTATGAGCAATGGAAGTTAGATGCCCGTAAAGCAAGACAGACCTTAAAAACAGACATAACTGATAAGCAACTGGCTGAAATTGCTGACTCTCTTGAGGATAAAAGGAACTGTATTCTGAAACTTTTCAGTGACATAAGACAATATGTTACACCTGCTGCTGATTTAAGACGTAAAATTGATGCATGTGAAGCTGTGACCAATGATATCATCAAATTTGTGTATGACAGAATGACAACTGTAGATGGCGAGTTTgatgcagagagaaaaaaagtttgtctAAGTGAACTAAAAGCACATAGTTATGCTCGCTCTATATATGGTTCAACTGCTTCAAAAATGAGTGTCAGCATGCACTCTGGATCTTCTAGTTCTGCAAGCAAACGTGCAGATGCTGCAGCAGAGCTGGCTGCAAAAGAGGTTGAATACAAGATGATGGAAACGGAAAGACAACAAAAGGAGAGAATAAGAACCTTAGAAGAGCAACTCAGAAGAGAGTTAGAAACTCAAAAGTTTGAGCTAGAACGGCTGCAGGTGGAAAAGGATATTGAAGTTGCTCGTGCCAGAGTAAAATCCtatgatgaagaaataaaacaagagacaAGAAGTGAGTCAACACAGAATAAACAAGAAGAGCAGagaaacaaaatgttacatCAGCAAAGCAATGTTGTACAGTCAACACCTCTCAGTGAAGTAACTCATCTTGCTCAAGCAGTTCAGGACAGTATAGCCATTAACAGGTTACCCATACCTGAACCCGCAGTGTTCAGTGGAGACCCAATTCAGTTTGTAAACTGGAAAGCGTCATTTATGTCATTAATAGATAGAAAGGGCATCCCAGCAGCTGATAAactctattatttaaaaaagtatgtgaGTGGCTCAGCACACAAATATCTTGAGGGCACCTTTTTTCGAAATGACGAAGAAGCCTATAAAGATGCTTGGGACAAACTAAACCAAAGATACGGCCAACCCTTTGTCATTCAAAGAGCGCTTTCGGGATAAACTTTCCAAGTGGCCAAAAATACAATCCAAAGATGCAGAAAGTCTGAGAACATTTGCAGACTTCCTTAATGCCTGTTTGCAAGCCATACCTCATGTTAAAGGTCTGGAAATATTAAACGATTGTGAAGAGAACCAAAAGCTCATACAGAAACTTCCAGATTGGGCAGCTTCCAGATGGAACCGTCAGGTCACTACAGCCCTCATGAATGGAAAGGAGTTTCCAAGCTTTCATGACTTTGTCAATTTCATGTCAGCAGAAGCAGAAATCATGTGTAATCCCATCACTTCATTGCATGCTCTTCATTCTCGTGAGTTACCTCAAGACAGAAGGATCtcaaaggaaataaaagaaacaaagcaatTGTCTTTAAGACTGAAACAAttgtaaacaatgacagacaaACAGCAGTTAAAGAACAGTTAAAAGCACAGTGCATGTTGTGTGAAGATGACAAACATCAGCTTCATAAGTGCCTGAAATTCATGGAGAGGTCTTTAAAGGACAGAAGGGCCTATGTGAAAGATAACAAACTCTGTTATGGGTGTTTAAAACCAGGCCACTGTGCAAAGGA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU30749 False 520 lncRNA 0.44 2 16454825 16455444
XM_043235516.1 True 2306 mRNA 0.40 2 16453074 16455479

Neighbor

gene id symbol gene type direction distance location
LOC122341848 LOC101886504,LOC101886427 coding downstream 2031 16449554 ~ 16451043 (-)
nudt1 nudt1,LOC107703398,LOC107592807,LOC107758325,LOC107674605 coding downstream 80635 16368873 ~ 16372439 (-)
ttyh3a ttyh3a,LOC107581706,LOC107591862,LOC107703399 coding downstream 95542 16308421 ~ 16357532 (-)
grifin grifin,LOC107758328,LOC107592780,LOC107592523 coding downstream 207671 16243653 ~ 16245403 (-)
LOC122341827 LOC107703344,LOC107753612,LOC101883165,LOC107592774,LOC107581787,LOC107674625,LOC107758329 coding downstream 211484 16237804 ~ 16241590 (-)
elfn1a elfn1,elfn1a,LOC107703384,LOC107674694,LOC107572165 coding upstream 86869 16542348 ~ 16629156 (-)
axin1 axin1,LOC107727128,LOC107703383,LOC107745589,LOC107674664 coding upstream 502483 16957962 ~ 16998780 (-)
pla2g10 zgc:92162,LOC107727130,LOC107703381,LOC107745603,LOC107674667,LOC107564700,LOC107568924 coding upstream 564945 17020424 ~ 17023995 (-)
rmi2 rmi2,LOC107674720,LOC107703341 coding upstream 589621 17045100 ~ 17047481 (-)
mslna LOC107703339,LOC107727132 coding upstream 593436 17048915 ~ 17060502 (-)
G20645 NA non-coding downstream 180550 16272279 ~ 16272524 (-)
G20643 NA non-coding downstream 183166 16269684 ~ 16269908 (-)
G20627 NA non-coding downstream 233817 16218246 ~ 16219257 (-)
G20630 NA non-coding downstream 236830 16214600 ~ 16216244 (-)
G20624 gna12,LOC107703403,LOC107758336,LOC107753491,LOC107592501,LOC107674729 non-coding downstream 245255 16205369 ~ 16207819 (-)
G20717 NA non-coding upstream 235686 16691165 ~ 16699422 (-)
G20752 NA non-coding upstream 327725 16783204 ~ 16783825 (-)
G20753 NA non-coding upstream 329511 16784990 ~ 16785208 (-)
LOC122341878 NA non-coding upstream 419185 16874664 ~ 16876081 (-)
G20781 NA non-coding upstream 490275 16945754 ~ 16946203 (-)
G20680 LOC101886504,LOC101886427 other downstream 1274 16451140 ~ 16451800 (-)
atp5mf atp5j2,LOC107703422,LOC107720056,LOC107737688,LOC107591715,LOC107674607,LOC107578700 other downstream 852726 15598770 ~ 15600348 (-)
plcd3a plcd3,plcd3a,LOC107591554,LOC107581738,LOC107738025,LOC107654535,LOC107674588,LOC108432051,LOC106607244 other downstream 1273715 15120806 ~ 15179359 (-)
LOC122341947 NA other downstream 1307466 15141817 ~ 15145608 (-)
mlx mlx,LOC107601295,LOC107721525,LOC107720011,LOC107590371,LOC107688133,LOC107654516 other downstream 2013533 14435147 ~ 14439541 (-)
mafk mafk,LOC107703391,LOC107674662 other upstream 260242 16715721 ~ 16729689 (-)
uncx uncx,LOC107703385,LOC107674712,LOC107568937,LOC107745590 other upstream 407246 16862725 ~ 16873987 (-)
snn snn,LOC107564698,LOC107703342 other upstream 583708 17039187 ~ 17042414 (-)
h3f3a h3f3b,H3F3A,LOC105909691,LOC107388308,LOC107572204,LOC101073377 other upstream 1208026 17663505 ~ 17691250 (-)
LOC122340174 LOC107710648,LOC107674639,LOC107565762 other upstream 1251254 17706733 ~ 17718609 (-)

Expression


Co-expression Network