G20803


Basic Information

Item Value
gene id G20803
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056701.1
NCBI id CM032070.1
chromosome length 30200998
location 17107992 ~ 17108694 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU30906
TGGTGAACTCAACTGGTGCGCTCTGGTCACTAGATATATTATGACCATTATAGGCTGTGCTCATTGTTGCTGTCAAAATGTAGATGGTATTTGACTGGAGATTTTTTCCCGCAATTTCTGAGAATCCCAAAGTGTTCTCTAACGTCTTGGATATCTGTATGAagaattttgtttttagttctttattttaaatatatacgtgaATATATGATctatttatcatatattatCTGTCTCACATTTTTAAGATCTCCTTTGATGCCGTAGGTCAGATGTATACTCAAGTCTTCCAAAAAACCCTTCGTTATTAATACACTTTTTTCATACTGGCTATGCCAAGTTACATTAAAGTTTCCATTTTCATTCTTCTGCACTGATAAGATTGGAGATTTCGGTTTGACTATGAAGTCTTTAGTCATGATTGTTTTGCTTAATAAAACACGTGTTCCTTCCAGAAGGGTAGTATTGAAGATCTCGGTTACAACAAACccttgtattttaattttgcactCACAGTTATCACTGAGATGACTTCTCTCAAAGACACATGGATACATTTGTT

Function

GO:

id name namespace
GO:0004198 calcium-dependent cysteine-type endopeptidase activity molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU30906 True 562 lncRNA 0.34 2 17107992 17108694

Neighbor

gene id symbol gene type direction distance location
LOC122341850 LOC107727127,LOC107674682,LOC107745580,LOC799265,LOC108433148,LOC105013234 coding upstream 10027 17089814 ~ 17097965 (+)
litaf litaf,LOC107727125,LOC107703380,LOC107674718 coding upstream 62700 17043049 ~ 17045292 (+)
zc3h7a zc3h7a,LOC107727124,LOC107564690,LOC107674666,LOC107703382 coding upstream 70505 17024634 ~ 17037487 (+)
trnat-cgu_1 NA coding upstream 102007 17005914 ~ 17005985 (+)
LOC122341973 NA coding upstream 172473 16934133 ~ 16935519 (+)
LOC122332748 NA coding downstream 273089 17381783 ~ 17384185 (+)
hs3st2 hs3st2,LOC107741797,LOC107550309,LOC107574133,LOC107703334,LOC107674621,LOC108433116 coding downstream 314594 17423288 ~ 17449492 (+)
ube2ia ube2i,ube2ia,LOC105013396 coding downstream 457569 17566263 ~ 17570451 (+)
baiap3 baiap3,LOC107719179,LOC107550313,LOC107703313,LOC107674731,LOC107565767,LOC107749910 coding downstream 470046 17578740 ~ 17622221 (+)
gpr146 LOC107565765,LOC107710650,LOC107674685,LOC107703371,LOC107550312,LOC107719180 coding downstream 549740 17658434 ~ 17668692 (+)
G20831 NA non-coding upstream 31818 17075788 ~ 17076174 (+)
G20830 NA non-coding upstream 32417 17075353 ~ 17075575 (+)
G20829 NA non-coding upstream 33168 17074622 ~ 17074824 (+)
G20801 NA non-coding upstream 45169 17057704 ~ 17062823 (+)
G20797 snn,LOC107564698,LOC107703342 non-coding upstream 65588 17039191 ~ 17042404 (+)
G20908 usp31,LOC107703377,LOC107550315,LOC107674671 non-coding downstream 395202 17503896 ~ 17516429 (+)
G20915 LOC107550314,LOC107703374,LOC107719177,LOC107565769,LOC107741796 non-coding downstream 444680 17553374 ~ 17563364 (+)
G20927 NA non-coding downstream 463436 17572130 ~ 17572473 (+)
G20953 NA non-coding downstream 542073 17650767 ~ 17651301 (+)
G20951 h3f3b,H3F3A,LOC105909691,LOC101073377,LOC107388308,LOC102790198,LOC107572204,LOC106578873 non-coding downstream 580721 17689415 ~ 17690288 (+)
micall2a micall2,micall2a,LOC107703317,LOC107745593,LOC107568921,LOC107674716 other upstream 323181 16770545 ~ 16784811 (+)
LOC122331507 psmg3,LOC107703392 other upstream 408510 16690703 ~ 16699482 (+)
gna12a gna12,gna12a,LOC107703403,LOC107753491,LOC107674729,LOC107758336 other upstream 900146 16179620 ~ 16207846 (+)
fscn1a fscn1a,LOC107703419,LOC107742378,LOC107581720,LOC107674660,LOC107720060 other upstream 1363798 15706936 ~ 15744194 (+)
zgc:165423 LOC107738133,LOC107654537,LOC107581795 other upstream 1827879 15269800 ~ 15280113 (+)
nsmce1 nsmce1 other downstream 4354 17113048 ~ 17117041 (+)
LOC122341316 NA other downstream 29236 17137930 ~ 17200630 (+)
G20950 igfals,LOC107703367,LOC107719182,LOC107674637,LOC107565761,LOC107710645 other downstream 610488 17719182 ~ 17723423 (+)
mrtfbb LOC107725018,LOC107572174,LOC107703365,LOC107674669 other downstream 761483 17870177 ~ 17901491 (+)
polr3k polr3k,LOC107703329 other downstream 795890 17904584 ~ 17906643 (+)

Expression


Co-expression Network