G20854


Basic Information

Item Value
gene id G20854
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056701.1
NCBI id CM032070.1
chromosome length 30200998
location 17059491 ~ 17070363 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU30993
GTCATCAGCTCTCACAGTTAAACTCTCAACAAGTGGCTGACCTGCTGGCTTGCAAACTGTCCAGCAATGTGACAAAAGAAACCTGGAAGCTTTTCTTCATCAAAACCAGCACAAACCTTGATGATGCACTGCTGAAATTTTCCAACAAGACTCCCAGTGTCAGCAATGTGTCTCTGTCCGATGTGCTGGATGTGATCGATGACATCCGGATCAGTCGCTTTAGTCCCCAGAGACTGAAGGATCCTGTCTTCATCCAGTCATGGTTCCAGGGACGACTGAACCCCTTCTTACCATCCATCTCTCAAAGACTCCTGTCCTGCCTCGGCACCAGAAACTTCACCTGTGAAAGTTACCGCACTATTTACTCAgatctaaataataattttggacTGATGAACAGTGCAACACAGAGATTTGTCCTCAGTGACTTTATTCGTCCATTCCTGTCACAACGTCAAAACACAGgTATCGATTGCACATTGCCATTTAACAACAGCGTGGACTTCATCCTGCAAAACTTCGGCAGTTTCTCTCCGTTGGCACGGCTTCAAGATTTCTCCAGTTTCAGCCGCAATTTTTCAGCTG

Function

GO:

id name namespace
GO:0006950 response to stress biological_process

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU30993 True 585 lncRNA 0.46 4 17059491 17070363

Neighbor

gene id symbol gene type direction distance location
rmi2 rmi2,LOC107674720,LOC107703341 coding downstream 12010 17045100 ~ 17047481 (-)
pla2g10 zgc:92162,LOC107727130,LOC107703381,LOC107745603,LOC107674667,LOC107564700,LOC107568924 coding downstream 35496 17020424 ~ 17023995 (-)
axin1 axin1,LOC107727128,LOC107703383,LOC107745589,LOC107674664 coding downstream 60711 16957962 ~ 16998780 (-)
elfn1a elfn1,elfn1a,LOC107703384,LOC107674694,LOC107572165 coding downstream 430335 16542348 ~ 16629156 (-)
LOC122341848 LOC101886504,LOC101886427 coding downstream 608448 16449554 ~ 16451043 (-)
ubfd1 ubfd1,LOC107564687,LOC107745602,LOC107674700,LOC107703338,LOC107727120 coding upstream 12916 17083279 ~ 17089129 (-)
LOC122341808 LOC107727118 coding upstream 35025 17105388 ~ 17109815 (-)
kdm8 kdm8,LOC107727121,LOC107564696,LOC107745601 coding upstream 46115 17116478 ~ 17120284 (-)
hs3st4 hs3st4,LOC107703335,LOC107568293,LOC107741793,LOC106601107,LOC105013403,LOC106607349 coding upstream 189442 17259805 ~ 17348605 (-)
usp31 usp31,LOC107674671,LOC107565772,LOC107550315,LOC107703377 coding upstream 433514 17503877 ~ 17526491 (-)
G20781 NA non-coding downstream 113288 16945754 ~ 16946203 (-)
LOC122341878 NA non-coding downstream 183410 16874664 ~ 16876081 (-)
G20753 NA non-coding downstream 274283 16784990 ~ 16785208 (-)
G20752 NA non-coding downstream 275666 16783204 ~ 16783825 (-)
G20717 NA non-coding downstream 360069 16691165 ~ 16699422 (-)
G20877 NA non-coding upstream 88033 17158396 ~ 17198716 (-)
G20895 NA non-coding upstream 387643 17458006 ~ 17458330 (-)
LOC122342167 NA non-coding upstream 429575 17499938 ~ 17501443 (-)
G20933 NA non-coding upstream 499205 17569568 ~ 17570455 (-)
G20936 NA non-coding upstream 500938 17571301 ~ 17571660 (-)
snn snn,LOC107564698,LOC107703342 other downstream 17077 17039187 ~ 17042414 (-)
uncx uncx,LOC107703385,LOC107674712,LOC107568937,LOC107745590 other downstream 185504 16862725 ~ 16873987 (-)
mafk mafk,LOC107703391,LOC107674662 other downstream 329802 16715721 ~ 16729689 (-)
LOC122341847 NA other downstream 604012 16453074 ~ 16455479 (-)
G20680 LOC101886504,LOC101886427 other downstream 607691 16451140 ~ 16451800 (-)
h3f3a h3f3b,H3F3A,LOC105909691,LOC107388308,LOC107572204,LOC101073377 other upstream 593142 17663505 ~ 17691250 (-)
LOC122340174 LOC107710648,LOC107674639,LOC107565762 other upstream 636370 17706733 ~ 17718609 (-)
G21010 NA other upstream 850585 17920948 ~ 17921707 (-)
LOC122333861 eci1,LOC107568619,LOC107690250,LOC107733832,LOC107590612,LOC107685938 other upstream 965147 18035510 ~ 18044587 (-)
dexi dexi,LOC107590611,LOC107567922,LOC107733843,LOC107736577,LOC107685935,LOC107690264 other upstream 1371502 18441865 ~ 18443213 (-)

Expression


Co-expression Network