LOC122341316


Basic Information

Item Value
gene id LOC122341316
gene name NA
gene type misc
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056701.1
NCBI id CM032070.1
chromosome length 30200998
location 17137930 ~ 17200630 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU31020
GTTCCTCAGTcctgtcagcccccGAAAccctcgccggaagaggcgagaagggagaggaaaccgccgccctgccgttctcctagcatcggacagcggaagagatggtgagtcccctcctcctacaactaatgttttctttgatgtgttccaacaggtagtcggagggggctcgttcggccgggctcagcgggaggatgaccggctcaagaattgctggaaccaggtacatttcatggatggagaggagacgcggcccggcccccatcctcttccccactttattgtggagaacggcctgctctattgtgtcgcccggcggaggggggaggagaaacggctcctggtggtgccccgagggaaagtggacaccattttggagctcgcccacgcccacccgctggccggacacctcggggccgccaacactatcaagaggatccgggaccgtttccactggccggggctcGACGGAGACGTGAAACttttctgccaggcctgcccagagtgccagaagacctcgccccggccacctccccctagtccacttatcccgctgcccataatcgaggtgcccttcgagcgcatcgggatggatctggtgggcc
>XM_043234677.1
ATGTTGCTTCCCAAATCCCTTTCTAGCGCGTGGATGCAGTCGGTGTCGGGGGGACTTTGGTACGTGAGGATTGTGGTAATTGAAACAATCTGTTCCCACGGCCTGCAGTGGAAGGAGGTTCCAAGGCCAGCCGGTGTGTTTGAGGTCAGAGCCCAGcaacagatcgtcgagcatttggcCACCCGCCAGAAtgagaccgagcaggagctcgctgccctcCGCGCCGCCACTCGACCACGCCCCGccgtgcctgatccccggatgcaagccacacagctgaTACCCAAGATGTCCGCCAGCGACGACCCCGAAATCTATCTTGAGATGTTCGAGAGAGCGTCGCAACCACTGAGGATGGGACCGGCGGGATTGGGCGTGGCGTTGgcccgctgctgcgtggctggcaggctgcagccTCCACCGGGAGCTTCCCACGCCGCACCGAAAATccccatcggcctgaatggacAGAAGTTCAGCgccctccttgactctggcagtaccattagcctggttcagtcccgcctcctaccCCCGCGCATGGAACCACGGAAACagctgccactgacctgcgtccacggggacaccaggaaagttTCCACCCGCCTCATCACCGTGACGACGGCCggaggaagctggcccctggaggtgggtCTCGTACGGGATCTgccggtaccaatcatcctTGGCGGGACTGGCGGGCTTCGAGGAGGCGCtacacaccgcgacacagcctgtcagcccccGAAAccctcgccggaagaggcgagaagggagaggaaaccgccgccctgccgttctcctagcatcggacagcggaagagatgCCTCACCGTGACGAgcctacctgagctaattccccaATTGCCTCACCGTGGACTCCCTCACCACTCCGAGCACTGGAAAGCACTGAAGACAACgctccgctgcactcaccggactcaccgctacACTTCCCCGGACGCACCGCTGCATTCCCGCACGCCTCGAACTCACCgcgcaccttctgtAACAGACCTGCGACCCACCGGTTGA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU31020 False 605 TUCP 0.62 2 17163701 17195884
XM_043234677.1 True 1035 mRNA 0.63 5 17137930 17200630

Neighbor

gene id symbol gene type direction distance location
LOC122341850 LOC107727127,LOC107674682,LOC107745580,LOC799265,LOC108433148,LOC105013234 coding upstream 39965 17089814 ~ 17097965 (+)
litaf litaf,LOC107727125,LOC107703380,LOC107674718 coding upstream 92638 17043049 ~ 17045292 (+)
zc3h7a zc3h7a,LOC107727124,LOC107564690,LOC107674666,LOC107703382 coding upstream 100443 17024634 ~ 17037487 (+)
trnat-cgu_1 NA coding upstream 131945 17005914 ~ 17005985 (+)
LOC122341973 NA coding upstream 202411 16934133 ~ 16935519 (+)
LOC122332748 NA coding downstream 181153 17381783 ~ 17384185 (+)
hs3st2 hs3st2,LOC107741797,LOC107550309,LOC107574133,LOC107703334,LOC107674621,LOC108433116 coding downstream 222658 17423288 ~ 17449492 (+)
ube2ia ube2i,ube2ia,LOC105013396 coding downstream 365633 17566263 ~ 17570451 (+)
baiap3 baiap3,LOC107719179,LOC107550313,LOC107703313,LOC107674731,LOC107565767,LOC107749910 coding downstream 378110 17578740 ~ 17622221 (+)
gpr146 LOC107565765,LOC107710650,LOC107674685,LOC107703371,LOC107550312,LOC107719180 coding downstream 457804 17658434 ~ 17668692 (+)
G20803 NA non-coding upstream 29236 17107992 ~ 17108694 (+)
G20831 NA non-coding upstream 61756 17075788 ~ 17076174 (+)
G20830 NA non-coding upstream 62355 17075353 ~ 17075575 (+)
G20829 NA non-coding upstream 63106 17074622 ~ 17074824 (+)
G20801 NA non-coding upstream 75107 17057704 ~ 17062823 (+)
G20908 usp31,LOC107703377,LOC107550315,LOC107674671 non-coding downstream 303266 17503896 ~ 17516429 (+)
G20915 LOC107550314,LOC107703374,LOC107719177,LOC107565769,LOC107741796 non-coding downstream 352744 17553374 ~ 17563364 (+)
G20927 NA non-coding downstream 371500 17572130 ~ 17572473 (+)
G20953 NA non-coding downstream 450137 17650767 ~ 17651301 (+)
G20951 h3f3b,H3F3A,LOC105909691,LOC101073377,LOC107388308,LOC102790198,LOC107572204,LOC106578873 non-coding downstream 488785 17689415 ~ 17690288 (+)
nsmce1 nsmce1 other upstream 20889 17113048 ~ 17117041 (+)
micall2a micall2,micall2a,LOC107703317,LOC107745593,LOC107568921,LOC107674716 other upstream 353119 16770545 ~ 16784811 (+)
LOC122331507 psmg3,LOC107703392 other upstream 438448 16690703 ~ 16699482 (+)
gna12a gna12,gna12a,LOC107703403,LOC107753491,LOC107674729,LOC107758336 other upstream 930084 16179620 ~ 16207846 (+)
fscn1a fscn1a,LOC107703419,LOC107742378,LOC107581720,LOC107674660,LOC107720060 other upstream 1393736 15706936 ~ 15744194 (+)
G20950 igfals,LOC107703367,LOC107719182,LOC107674637,LOC107565761,LOC107710645 other downstream 518552 17719182 ~ 17723423 (+)
mrtfbb LOC107725018,LOC107572174,LOC107703365,LOC107674669 other downstream 669547 17870177 ~ 17901491 (+)
polr3k polr3k,LOC107703329 other downstream 703954 17904584 ~ 17906643 (+)
si:ch211-66e2.5 si:ch211-66e2.5,LOC107572173,LOC107703361,LOC107596817,LOC107754045,LOC107735828,LOC107674574 other downstream 720287 17920917 ~ 17929634 (+)
LOC122341796 pde6g,LOC107690252,LOC107733865,LOC107685924,LOC107590586 other downstream 873445 18074075 ~ 18075616 (+)

Expression


Co-expression Network