G21050


Basic Information

Item Value
gene id G21050
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056701.1
NCBI id CM032070.1
chromosome length 30200998
location 18038561 ~ 18041682 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU31282
gACGACATAAAAACCAGCCCCTTCTTTCCTATGAGGTTCCCTTTGTGCCAAAAATAAGTCGATCGTTTTGTACTAGTTGTATTTGTCTACAGTCCTTGCTTACTTGTTCAGTAGTGTTACTCAACGGGGGAGGTACTGCCTCCCAGTGCTATTCTTCAGACTTCTTCAGGCCCCCTTCATCCGTAGACCACAGATGCCTCCAAGACAGGCTGGGGCGCTACATGCAATGGGCAGGCAGTCTCAGGGCTCTGGACAGGGCCTCACCTGCtttggcacatcaattgcctagAGCTATTGGCAGTACATCTAGCTCTTCAGGCCGCTGCTGCAAGACAGGCACATATTGGTCCATATGAACAATACTGTGACTGTGTTGATGATCTGGAGTCGATTCAGAGAGACTCAGGTCAACATGTTTGCTTCTGACAAATCCTCCCATTGCCAGCCATTTTATTCCCTAACCGAGGCTCCCCTCAGCACGGACGCAGTCGCTCTATGAAAATATGCATTCCCCCAGTGAGCCTGCTCGCACAGATTCTGTGCAAGGTCAGTGAAGACGAGGAACAGGTTTTGTTGGTTGCTCCATACTTGCCCACCCAGACTTGGTTTTCTGAACTCAATCTCCTTGCAACAGCCTCTCTACTCTGAGGAAGGACCTCCTTTCACAGGGGCTTGACACCATGTGGCATCTGCATCCAGACCTGTGGAACCTCCATGTGTGGCTACTGATCGGGACGCGGCAGACTTAAGTGATTTGCCACAGGCTGTGGTGAACACTATTACCCAGActagagctccctctacgaggcAAGCTTACGCCCTGAAGTGGAGTCTGTTCGCAAACTGGTGTTCTTCTCCTTGCAGAGAAGACCCCCGAAGGTGCACAATTGGAGTAGTGCTCTCCTTCCTGCAAGAAAGGTTGGAACATAGGCTGTCACCCTCCACCTTGAAAGCCATTGCAGCCCATCATGATGCAGCAGATGATTTCTTAGAGAAAGCACAATCTCCTTGAGAGGTTCCTGAGGGGTGCCAGAAGATTCTTCCCTAGTGCCCTCATGGTATCTCTCGGTTGTCCTGGCTGGACTTTAGAAAGGTCCCTTTGAGCTGCTGGAGTCAGATGAGCTTAAGTTCCTGTCTGCTAATGCAGCACTCCTGACAGCGGTCACTTCTATCAAGAGGGTCAGGGACCTCCTAGCATTTTCGGTAAGTGAAGAGTGCCTTGTGTTCGGGCTGGCCTACTATCATGTAGTCCTAAGACCCTGGCCTGGATAcatgcccaaggttcccaccacGCCCTTTAACGAACAAGTGGTGAACCTGTACTGTACAGTACTGGGTTAGGTGCTCCATATAGCTGATATAGGTGCTCCATATAGCTGATGTGTATCTTTCACGGTAAGCTTTCCTCTTGTGAACCCGTGTCTTCCCTTGACAGTCGTTCCTTGTATGCTTACAGCCCCCATTGGTCAGGATGTGGTCTACGTAGGATGTGGTCTCCTTGGAAGGTTGGAAGTCCTTCCAGTAGAAGTCTTTACTAACTCAGGAACAGTGGGTCGGCTTCTCCAGAAGTGCTCTCCGGTAGTAACGAGTTCAGGTTGTGACATTTTCCATTGGACTCCAAACTGTTGTCACAACATCGTGACAACTTGTGGCCTCCATTCCCTCCATCAGGAAATGAGGGTTACGTACATAACCAAGATGTTCCTTCTCAGCAGATATACAATGCAATGCTATAGCTTGATGTGTTGTGCcg

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU31282 True 1753 lncRNA 0.50 2 18038561 18041682

Neighbor

gene id symbol gene type direction distance location
dnase1 dnase1,LOC107733840,LOC107690335,LOC107568632,LOC107738635 coding upstream 3199 18032712 ~ 18035362 (+)
pde4a pde4a,LOC107596808,LOC107674699,LOC107703358,LOC108443456,LOC108257440,LOC106958375 coding upstream 12429 17980222 ~ 18026132 (+)
raver1 raver1,LOC107703359,LOC107587918,LOC107674651,LOC107596810,LOC107754048 coding upstream 67887 17954849 ~ 17970674 (+)
tyk2 tyk2,LOC107703360,LOC107587917,LOC107674650,LOC107596804 coding upstream 84229 17931705 ~ 17954332 (+)
unkl unkl,LOC107550311,LOC107674636,LOC107565763,LOC107710649,LOC107703366,LOC106601098 coding upstream 322939 17691906 ~ 17715622 (+)
c3h16orf72 zgc:66160,c2h16orf72,LOC107738628,LOC107590581,LOC107685917,LOC107690255,LOC105900007,LOC103025273 coding downstream 83312 18124994 ~ 18129811 (+)
atf7ip2 LOC107690257,LOC107733857 coding downstream 331075 18372757 ~ 18378482 (+)
ciita LOC107567931,LOC107733851,LOC107690261 coding downstream 384678 18426360 ~ 18437883 (+)
clec16a clec16a,LOC107690263,LOC107590577,LOC107567904 coding downstream 401689 18443371 ~ 18487548 (+)
pigq pigq,LOC107690265,LOC107733876,LOC107729199,LOC107590576,LOC107685906 coding downstream 453912 18495594 ~ 18504038 (+)
G20994 NA non-coding upstream 175480 17862067 ~ 17863081 (+)
G20951 h3f3b,H3F3A,LOC105909691,LOC101073377,LOC107388308,LOC102790198,LOC107572204,LOC106578873 non-coding upstream 348273 17689415 ~ 17690288 (+)
G20953 NA non-coding upstream 387260 17650767 ~ 17651301 (+)
G20927 NA non-coding upstream 466088 17572130 ~ 17572473 (+)
G20915 LOC107550314,LOC107703374,LOC107719177,LOC107565769,LOC107741796 non-coding upstream 475197 17553374 ~ 17563364 (+)
G21073 NA non-coding downstream 74856 18116538 ~ 18119426 (+)
G21076 NA non-coding downstream 116489 18158171 ~ 18158546 (+)
LOC122341661 LOC107601299,LOC107654457,LOC107720081,LOC107688136,LOC107721482 non-coding downstream 533005 18574687 ~ 18744585 (+)
LOC122331012 NA non-coding downstream 610679 18652361 ~ 18654715 (+)
G21180 NA non-coding downstream 660902 18702584 ~ 18703683 (+)
si:ch211-66e2.5 si:ch211-66e2.5,LOC107572173,LOC107703361,LOC107596817,LOC107754045,LOC107735828,LOC107674574 other upstream 108927 17920917 ~ 17929634 (+)
polr3k polr3k,LOC107703329 other upstream 131918 17904584 ~ 17906643 (+)
mrtfbb LOC107725018,LOC107572174,LOC107703365,LOC107674669 other upstream 137070 17870177 ~ 17901491 (+)
G20950 igfals,LOC107703367,LOC107719182,LOC107674637,LOC107565761,LOC107710645 other upstream 315138 17719182 ~ 17723423 (+)
LOC122341316 NA other upstream 837931 17137930 ~ 17200630 (+)
LOC122341796 pde6g,LOC107690252,LOC107733865,LOC107685924,LOC107590586 other downstream 32393 18074075 ~ 18075616 (+)
si:ch211-157c3.4 LOC107690254,LOC107733863,LOC107738629,LOC107568011,LOC107685921,LOC107590583 other downstream 55963 18097645 ~ 18101933 (+)
nubp1 nubp1,LOC107690260,LOC107685912,LOC107590599 other downstream 364284 18405966 ~ 18425076 (+)
G21124 rab40c,LOC107685905,LOC107590575,LOC107567894,LOC107690266,LOC103366693 other downstream 401708 18443390 ~ 18843419 (+)
G21173 LOC107601293,LOC107688129,LOC107720008,LOC107654513 other downstream 640672 18682354 ~ 18687853 (+)

Expression


Co-expression Network