G21183 (LOC107720013,LOC107721528,LOC107688135,LOC107654518,LOC107601298)


Basic Information

Item Value
gene id G21183
gene name LOC107720013,LOC107721528,LOC107688135,LOC107654518,LOC107601298
gene type unknown
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056701.1
NCBI id CM032070.1
chromosome length 30200998
location 18733165 ~ 18733765 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU31493
GTGGAGAACATGAACTTCCGTGTGCATCTTCAGTATGAGTTCACCCAGCTGGGTCTCGACCAGTACTTAGAATCCTTGAAGGAGATGGAAAGTGAGAAGTTGCAAGTACAGATCCAGGCGTACTTGGATAACGTGTTTGATGTTGGAACTTTGCTGGAGGATGCCGAAAATAAAGGGGAAGTAATGGAGCATTTAACAGAACTGCAGGAGACCAACGCACAGTTGAATGCCAGATTGCAGGAATATGAAAATGGAGCACTGGAAAAAATGGCAGAACTAGAGCAACAACTAATGCAGGCCACTAAAGAGTCAGCACTGCTTAAGG

Function

NR:

description
LOW QUALITY PROTEIN: transcription and mRNA export factor ENY2-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU31493 True 325 TUCP 0.45 3 18733165 18733765

Neighbor

gene id symbol gene type direction distance location
LOC122342072 psmc3ip,LOC107721526,LOC107654517,LOC107601296,LOC107720012,LOC107590372,LOC107688134 coding upstream 13443 18714925 ~ 18719722 (+)
retreg3 fam134c,LOC107601294,LOC107590373,LOC107720010,LOC107654515,LOC107688130 coding upstream 21530 18704513 ~ 18711635 (+)
LOC122341319 psmc3ip,LOC107601296,LOC107721526,LOC107654517,LOC107720012,LOC107590372,LOC107688134 coding upstream 158746 18572664 ~ 18574419 (+)
LOC122341960 llgl1,LOC107720045,LOC107674688,LOC107703430 coding upstream 166559 18550993 ~ 18566606 (+)
LOC122342138 LOC107729418,LOC107658494,LOC107689662,LOC107554108,LOC107583010,LOC107730753,LOC100007086 coding upstream 182738 18545034 ~ 18550427 (+)
LOC122329464 rps15a,RPS15A,MGC114789,LOC107686992,LOC106589173 coding downstream 222265 18956030 ~ 18959493 (+)
LOC122341328 si:dkey-202l16.5,LOC107690339,LOC107733837,LOC107685903,LOC107590608,LOC107729185 coding downstream 388558 19122323 ~ 19128648 (+)
xylt1 xylt1,LOC107567884,LOC107729195,LOC107686990,LOC107590574,LOC107690267,LOC107733871,LOC108439755 coding downstream 469714 19203479 ~ 19261885 (+)
c3h17orf75 zgc:153240,LOC107690268,LOC107567861,LOC107729180,LOC107755588,LOC107590573,LOC107687012 coding downstream 559036 19292801 ~ 19297531 (+)
ppp4ca ppp4c,LOC107729194,LOC107755586,LOC107690278,LOC107590569,LOC107567834 coding downstream 643210 19376975 ~ 19380629 (+)
G21180 NA non-coding upstream 29482 18702584 ~ 18703683 (+)
LOC122331012 NA non-coding upstream 78450 18652361 ~ 18654715 (+)
G21076 NA non-coding upstream 574619 18158171 ~ 18158546 (+)
G21073 NA non-coding upstream 613739 18116538 ~ 18119426 (+)
G21049 NA non-coding upstream 690544 18035539 ~ 18042621 (+)
G21188 pigq,LOC107733876,LOC107690265,LOC107590576,LOC107568381,LOC107729199 non-coding downstream 120344 18854109 ~ 18854543 (+)
G21151 NA non-coding downstream 525152 19258917 ~ 19287649 (+)
G21215 NA non-coding downstream 571087 19304852 ~ 19305058 (+)
G21239 LOC107687002 non-coding downstream 704242 19438007 ~ 19440646 (+)
LOC122341657 NA non-coding downstream 721661 19455426 ~ 19459635 (+)
G21182 LOC107654518,LOC107601298,LOC107721528,LOC107688135,LOC107720013 other upstream 1067 18725961 ~ 18732098 (+)
G21173 LOC107601293,LOC107688129,LOC107720008,LOC107654513 other upstream 45312 18682354 ~ 18687853 (+)
nubp1 nubp1,LOC107690260,LOC107685912,LOC107590599 other upstream 308089 18405966 ~ 18425076 (+)
si:ch211-157c3.4 LOC107690254,LOC107733863,LOC107738629,LOC107568011,LOC107685921,LOC107590583 other upstream 631232 18097645 ~ 18101933 (+)
LOC122341796 pde6g,LOC107690252,LOC107733865,LOC107685924,LOC107590586 other upstream 657549 18074075 ~ 18075616 (+)
LOC122341799 rab40c,LOC107567894,LOC107690266,LOC107685905,LOC107590575,LOC103366693 other downstream 94900 18828665 ~ 18841760 (+)
G21125 rab40c,LOC107567894,LOC107690266,LOC107685905,LOC107590575,LOC103366693,LOC106591169,LOC106564622 other downstream 135501 18869266 ~ 18876127 (+)
G21202 NA other downstream 257693 18991458 ~ 18993234 (+)
G21213 NA other downstream 557680 19291445 ~ 19292341 (+)
ypel3 ypel3,LOC106600728,LOC103040367,LOC107686999,LOC107590566,LOC107567778,LOC105012807,LOC104942727,LOC108259066 other downstream 665643 19399408 ~ 19403176 (+)

Expression


Co-expression Network