G21202


Basic Information

Item Value
gene id G21202
gene name NA
gene type unknown
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056701.1
NCBI id CM032070.1
chromosome length 30200998
location 18991458 ~ 18993234 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU31517
CTGACACCTTCAGCTCCTCCTAAATCCTTTTTTTGCAACCGTCACAACTCTTTTCATGTTATCGCAATGTCACGGCATGTTTATCAAAATGAAACtgatataaaatagaaaaaatagattccaatgtttttaatagtgtaGGCTTACGTCAAACCTTTTTCTTGTACACAGGCTCTGCATTAAGCACTATATAAAGTgttgaatgaaaaatgtttctatCTGCAATGTTGCAGTATTTGACAAACACTGCATCTAATCCACTTCATCTGTAATAACGTACACAAACAGAGCAAGCGACATCACAGCAAGCAGAAAGTGTCTGACTTGATGACTTTGTTTTTAACTCATTCCCTGATTGCAAGCAGCCAAAACGAAGTTGGGCACATATTGTTTCATGCCACGCTCCATCTCTCGCCCTGCCCCAAACTCAAACAGAGCACTTTTagaaaaaactgcatttgcaCTCATTGGAAGGaatctgcacaaaaaaagagattatttgaatatgacacacttcacctttaaatgtaaaaaggctcttaacattaatatttaactatCCAGTGGCTGAATCCTCACTTACAGCCAAGATCAGAAGTAAATGAGATGTATGTGAATAGATAATTTCATACAGTTTCTCTTTTAAGAATATCAAATAATTTGCActttcacacatacagtacagatGTAACACCACTTAGACAAGCATTAGACGCTCtattgaaaaatttaaataacaatgcaTTCCCGCTTCGCACCCCGCTGGGAACGTATGAATGACAAGAGTGCTTTATTGAAATTTTAAGGTCACATCCTCCTTTGGATCACATGACAGCAATGACATTTCACTGTTTGCGCACCCCGGGCGGGACGCCACATCTCCGAGGACCAGATAACAATCAGATTGCATACAAAGTGATGTCTAGGCCAGGGTCACAGAGTCCCGGAGGAGACGTGCTCCTCAAATGAGAGAGTGCAACAAGCCACACTAGCCCAGTTTAAATATGGAGTCGTACATTTGCAATGTAGAAACATAAAaggttttgtaaaaatgttggtCCAATGCAAACTGTAGAGTCCAGCAAGCTTGCAATCTTCCTCACTAAAAATACATCTCAGTCAGATCTGAGAGGCCACCCTATCATTATTATGGATGTGAGTAATCCGGACGGGCCCGATCTGGAAAATGTGACGTCCAAATGGCGTACGTGCAAAAACGAGACTGAGCCCGGGAACTTTAGGAACCGCGTTGAAATTGCATGGATGCTACCAACATGTCCAGCCGATGTCCGCTTTTGTTCGTTTGAGCAATATATGGCGAAAGCACCAAACACTGGCTCGTATAAAAACACtagaataaagaaaatgacaagCAGCATGACTGGAATCTCAGTTCTTGAGGTCATTTAAGATCAATCGTCCAGTTAGTTCCCGATGAGCTCGATGTTTATCAAATGAACAGATGAACCTCAGGTGGAGGGGCAAGAAGGTCTTTCTACTAACGCCCGTACTAGTACCGTAAATCTTGTGTTTATAGTTGTAATATGGTTGGGATGATAGCCTTTGTAAATAAAGGCAGCTTGTTTACAAAAGGTATTGAATGAGCTGCAAAAACAGCATATAGACATTAGTCATTGActaaaaaatatctatttcatttatataaacacatgaataaatagCCAACTTACAACCCAACTCA
>TU31519
CTGACACCTTCAGCTCCTCCTAAATCCTTTTTTTGCAACCGTCACAACTCTTTTCATGTTATCGCAATGTCACGGCATGTTTATCAAAATGAAACtgatataaaatagaaaaaatagattccaatgtttttaatagtgtaGGCTTACGTCAAACCTTTTTCTTGTACACAGGCTCTGCATTAAGCACTATATAAAGTgttgaatgaaaaatgtttctatCTGCAATGTTGCAGTATTTGACAAACACTGCATCTAATCCACTTCATCTGTAATAACGTACACAAACAGAGCAAGCGACATCACAGCAAGCAGAAAGTGTCTGACTTGATGACTTTGTTTTTAACTCATTCCCTGATTGCAAGCAGCCAAAACGAAGTTGGGCACATATTGTTTCATGCCACGCTCCATCTCTCGCCCTGCCCCAAACTCAAACAGAGCACTTTTagaaaaaactgcatttgcaCTCATTGGAAGGaatctgcacaaaaaaagagattatttgaatatgacacacttcacctttaaatgtaaaaaggctcttaacattaatatttaactatCCAGTGGCTGAATCCTCACTTACAGCCAAGATCAGAAGTAAATGAGATGTATGTGAATAGATAATTTCATACAGTTTCTCTTTTAAGAATATCAAATAATTTGCActttcacacatacagtacagatGTAACACCACTTAGACAAGCATTAGACGCTCtattgaaaaatttaaataacaatgcaTTCCCGCTTCGCACCCCGCTGGGAACGTATGAATGACAAGAGTGCTTTATTGAAATTTTAAGGTCACATCCTCCTTTGGATCACATGACAGCAATGACATTTCACTGTTTGCGCACCCCGGGCGGGACGCCACATCTCCGAGGACCAGATAACAATCAGATTGCATACAAAGTGATGTCTAGGCCAGGGTCACAGAGTCCCGGAGGAGACGTGCTCCTCAAATGAGAGAGTGCAACAAGCCACACTAGCCCAGTTTAAATATGGAGTCGTACATTTGCAATGTAGAAACATAAAaggttttgtaaaaatgttggtCCAATGCAAACTGTAGAGTCCAGCAAGCTTGCAATCTTCCTCACTAAAAATACATCTCAGTCAGATCTGAGAGGCCACCCTATCATTATTATGGATGTGAGTAATCCGGACGGGCCCGATCTGGAAAATGTGACGTCCAAATGGCGTACGTGCAAAAACGAGACTGAGCCCGGGAACTTTAGGAACCGCGTTGAAATTGCATGGATGCTACCAACATGTCCAGCCGATGTCCGCTTTTGTTCGTTTGAGCAATATATGGCGAAAGCACCAAACACTGGCTCGTATAAAAACACtagaataaagaaaatgacaagCAGCATGACTGGAATCTCAGTTCTTGAGGTCATTTAAGATCAATCGTCCAGTTAGTTCCCGATGAGCTCGATGTTTATCAAATGAACAGATGAACCTCAGGTGGAGGGGCAAGAAGGTCTTTCTACTAACGCCCGTACTAGTACCGTAAATCTTGTGTTTATAGTTGTAATATGGTTGGGATGATAGCCTTTGTAAATAAAGGCAGCTTGTTTACAAAAGGTATTGAATGAGCTGCAAAAACAGCATATAGACATTAGTCATTGActaaaaaatatctatttcatttatataaacacatgaataaatagCCAACTTACAACCCAACTCAGTTACCCAGTACCTCTGTTCAGGGGAAaggaaaaattataaaacaataaaaaggcaaagaaaTTACATATCTTTT
>TU31520
CTGACACCTTCAGCTCCTCCTAAATCCTTTTTTTGCAACCGTCACAACTCTTTTCATGTTATCGCAATGTCACGGCATGTTTATCAAAATGAAACtgatataaaatagaaaaaatagattccaatgtttttaatagtgtaGGCTTACGTCAAACCTTTTTCTTGTACACAGGCTCTGCATTAAGCACTATATAAAGTgttgaatgaaaaatgtttctatCTGCAATGTTGCAGTATTTGACAAACACTGCATCTAATCCACTTCATCTGTAATAACGTACACAAACAGAGCAAGCGACATCACAGCAAGCAGAAAGTGTCTGACTTGATGACTTTGTTTTTAACTCATTCCCTGATTGCAAGCAGCCAAAACGAAGTTGGGCACATATTGTTTCATGCCACGCTCCATCTCTCGCCCTGCCCCAAACTCAAACAGAGCACTTTTagaaaaaactgcatttgcaCTCATTGGAAGGaatctgcacaaaaaaagagattatttgaatatgacacacttcacctttaaatgtaaaaaggctcttaacattaatatttaactatCCAGTGGCTGAATCCTCACTTACAGCCAAGATCAGAAGTAAATGAGATGTATGTGAATAGATAATTTCATACAGTTTCTCTTTTAAGAATATCAAATAATTTGCActttcacacatacagtacagatGTAACACCACTTAGACAAGCATTAGACGCTCtattgaaaaatttaaataacaatgcaTTCCCGCTTCGCACCCCGCTGGGAACGTATGAATGACAAGAGTGCTTTATTGAAATTTTAAGGTCACATCCTCCTTTGGATCACATGACAGCAATGACATTTCACTGTTTGCGCACCCCGGGCGGGACGCCACATCTCCGAGGACCAGATAACAATCAGATTGCATACAAAGTGATGTCTAGGCCAGGGTCACAGAGTCCCGGAGGAGACGTGCTCCTCAAATGAGAGAGTGCAACAAGCCACACTAGCCCAGTTTAAATATGGAGTCGTACATTTGCAATGTAGAAACATAAAaggttttgtaaaaatgttggtCCAATGCAAACTGTAGAGTCCAGCAAGCTTGCAATCTTCCTCACTAAAAATACATCTCAGTCAGATCTGAGAGGCCACCCTATCATTATTATGGATGTGAGTAATCCGGACGGGCCCGATCTGGAAAATGTGACGTCCAAATGGCGTACGTGCAAAAACGAGACTGAGCCCGGGAACTTTAGGAACCGCGTTGAAATTGCATGGATGCTACCAACATGTCCAGCCGATGTCCGCTTTTGTTCGTTTGAGCAATATATGGCGAAAGCACCAAACACTGGCTCGTATAAAAACACtagaataaagaaaatgacaagCAGCATGACTGGAATCTCAGTTCTTGAGGTCATTTAAGATCAATCGTCCAGTTAGTTCCCGATGAGCTCGATGTTTATCAAATGAACAGATGAACCTCAGGTGGAGGGGCAAGAAGGTCTTTCTACTAACGCCCGTACTAGTACCGTAAATCTTGTGTTTATAGTTGTAATATGGTTGGGATGATAGCCTTTGTAAATAAAGGCAGCTTGTTTACAAAAGGTATTGAATGAGCTGCAAAAACAGCATATAGACATTAGTCATTGActaaaaaatatctatttcatttatataaacacatgaataaatagCCAACTTACAACCCAACTCAGTTACCCAGTACCTCTGTTCAGGGGAAaggaaaaatta

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU31517 False 1702 TUCP 0.40 1 18991458 18993159
TU31519 True 1777 TUCP 0.39 1 18991458 18993234
TU31520 False 1740 TUCP 0.40 1 18991458 18993197

Neighbor

gene id symbol gene type direction distance location
LOC122329464 rps15a,RPS15A,MGC114789,LOC107686992,LOC106589173 coding upstream 31965 18956030 ~ 18959493 (+)
LOC122342072 psmc3ip,LOC107721526,LOC107654517,LOC107601296,LOC107720012,LOC107590372,LOC107688134 coding upstream 271736 18714925 ~ 18719722 (+)
retreg3 fam134c,LOC107601294,LOC107590373,LOC107720010,LOC107654515,LOC107688130 coding upstream 279823 18704513 ~ 18711635 (+)
LOC122341319 psmc3ip,LOC107601296,LOC107721526,LOC107654517,LOC107720012,LOC107590372,LOC107688134 coding upstream 417039 18572664 ~ 18574419 (+)
LOC122341960 llgl1,LOC107720045,LOC107674688,LOC107703430 coding upstream 424852 18550993 ~ 18566606 (+)
LOC122341328 si:dkey-202l16.5,LOC107690339,LOC107733837,LOC107685903,LOC107590608,LOC107729185 coding downstream 129089 19122323 ~ 19128648 (+)
xylt1 xylt1,LOC107567884,LOC107729195,LOC107686990,LOC107590574,LOC107690267,LOC107733871,LOC108439755 coding downstream 210245 19203479 ~ 19261885 (+)
c3h17orf75 zgc:153240,LOC107690268,LOC107567861,LOC107729180,LOC107755588,LOC107590573,LOC107687012 coding downstream 299567 19292801 ~ 19297531 (+)
ppp4ca ppp4c,LOC107729194,LOC107755586,LOC107690278,LOC107590569,LOC107567834 coding downstream 383741 19376975 ~ 19380629 (+)
mapk3 mapk3,LOC107686994,LOC108411041,LOC107567791,LOC107690275,LOC108256206 coding downstream 391788 19385022 ~ 19393198 (+)
G21188 pigq,LOC107733876,LOC107690265,LOC107590576,LOC107568381,LOC107729199 non-coding upstream 136915 18854109 ~ 18854543 (+)
LOC122341661 LOC107601299,LOC107654457,LOC107720081,LOC107688136,LOC107721482 non-coding upstream 246873 18574687 ~ 18744585 (+)
G21180 NA non-coding upstream 287775 18702584 ~ 18703683 (+)
LOC122331012 NA non-coding upstream 336743 18652361 ~ 18654715 (+)
G21076 NA non-coding upstream 832912 18158171 ~ 18158546 (+)
G21151 NA non-coding downstream 265683 19258917 ~ 19287649 (+)
G21215 NA non-coding downstream 311618 19304852 ~ 19305058 (+)
G21239 LOC107687002 non-coding downstream 444773 19438007 ~ 19440646 (+)
LOC122341657 NA non-coding downstream 462192 19455426 ~ 19459635 (+)
G21269 aclya,LOC107687019,LOC107729187,LOC107590593,LOC107755575,LOC107567706,LOC107690323 non-coding downstream 477765 19470999 ~ 19472687 (+)
G21125 rab40c,LOC107567894,LOC107690266,LOC107685905,LOC107590575,LOC103366693,LOC106591169,LOC106564622 other upstream 115331 18869266 ~ 18876127 (+)
G21124 rab40c,LOC107685905,LOC107590575,LOC107567894,LOC107690266,LOC103366693 other upstream 148039 18443390 ~ 18843419 (+)
LOC122341799 rab40c,LOC107567894,LOC107690266,LOC107685905,LOC107590575,LOC103366693 other upstream 149698 18828665 ~ 18841760 (+)
G21183 LOC107720013,LOC107721528,LOC107688135,LOC107654518,LOC107601298 other upstream 257693 18733165 ~ 18733765 (+)
G21182 LOC107654518,LOC107601298,LOC107721528,LOC107688135,LOC107720013 other upstream 259360 18725961 ~ 18732098 (+)
G21213 NA other downstream 298211 19291445 ~ 19292341 (+)
ypel3 ypel3,LOC106600728,LOC103040367,LOC107686999,LOC107590566,LOC107567778,LOC105012807,LOC104942727,LOC108259066 other downstream 406174 19399408 ~ 19403176 (+)
LOC122341338 LOC107567476,LOC107754244,LOC107690310,LOC107653556,LOC107731194,LOC107570937 other downstream 1071036 20064270 ~ 20069253 (+)
LOC122341546 eftud2,LOC107690313,LOC107731090,LOC107653466,LOC107567469 other downstream 1101617 20094851 ~ 20113498 (+)
eftud2 eftud2,LOC107690313,LOC107731090,LOC107653466,LOC107754997 other downstream 1192301 20185535 ~ 20195721 (+)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
zebrafish (Danio rerio) XLOC_025383 NA non-coding NC_007114.7 CM002887.2 26411233 ~ 26416784 (+)