G21215


Basic Information

Item Value
gene id G21215
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056701.1
NCBI id CM032070.1
chromosome length 30200998
location 19304852 ~ 19305058 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU31539
ATTTAAACgagacaaagcaaaaacaatttaaGTTTCAATCAGAAGAAGTAATAACCTACTTTGTGACATGGAAAATATTTATCagttatatatgtaaaaaaaataataattgtaaaagacctaaaattacaatattgaCATTCACAATGATTCTCTAAAAATATTAGGcaagtttacaaaaaatgtgaaaacaacgCACTTACAAAC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU31539 True 207 lncRNA 0.24 1 19304852 19305058

Neighbor

gene id symbol gene type direction distance location
c3h17orf75 zgc:153240,LOC107690268,LOC107567861,LOC107729180,LOC107755588,LOC107590573,LOC107687012 coding upstream 7321 19292801 ~ 19297531 (+)
xylt1 xylt1,LOC107567884,LOC107729195,LOC107686990,LOC107590574,LOC107690267,LOC107733871,LOC108439755 coding upstream 42967 19203479 ~ 19261885 (+)
LOC122341328 si:dkey-202l16.5,LOC107690339,LOC107733837,LOC107685903,LOC107590608,LOC107729185 coding upstream 176204 19122323 ~ 19128648 (+)
LOC122329464 rps15a,RPS15A,MGC114789,LOC107686992,LOC106589173 coding upstream 345359 18956030 ~ 18959493 (+)
LOC122342072 psmc3ip,LOC107721526,LOC107654517,LOC107601296,LOC107720012,LOC107590372,LOC107688134 coding upstream 585130 18714925 ~ 18719722 (+)
ppp4ca ppp4c,LOC107729194,LOC107755586,LOC107690278,LOC107590569,LOC107567834 coding downstream 71917 19376975 ~ 19380629 (+)
mapk3 mapk3,LOC107686994,LOC108411041,LOC107567791,LOC107690275,LOC108256206 coding downstream 79964 19385022 ~ 19393198 (+)
gdpd3a gdpd3a,LOC107590565,LOC107686997,LOC107729175,LOC107755582 coding downstream 89673 19394731 ~ 19399272 (+)
si:ch211-11k18.4 si:ch211-11k18.4,ehd3,LOC107567764,LOC107755580,LOC107690281,LOC107590563,LOC107687000,LOC108411040 coding downstream 98504 19403562 ~ 19408684 (+)
rabep2 LOC107690284,LOC107567756,LOC107755579,LOC107729174,LOC107687001 coding downstream 104533 19409591 ~ 19417891 (+)
G21151 NA non-coding upstream 17203 19258917 ~ 19287649 (+)
G21188 pigq,LOC107733876,LOC107690265,LOC107590576,LOC107568381,LOC107729199 non-coding upstream 450309 18854109 ~ 18854543 (+)
LOC122341661 LOC107601299,LOC107654457,LOC107720081,LOC107688136,LOC107721482 non-coding upstream 560267 18574687 ~ 18744585 (+)
G21180 NA non-coding upstream 601169 18702584 ~ 18703683 (+)
LOC122331012 NA non-coding upstream 650137 18652361 ~ 18654715 (+)
G21239 LOC107687002 non-coding downstream 132949 19438007 ~ 19440646 (+)
LOC122341657 NA non-coding downstream 150368 19455426 ~ 19459635 (+)
G21269 aclya,LOC107687019,LOC107729187,LOC107590593,LOC107755575,LOC107567706,LOC107690323 non-coding downstream 165941 19470999 ~ 19472687 (+)
G21246 NA non-coding downstream 178443 19483501 ~ 19484384 (+)
G21275 NA non-coding downstream 184715 19489773 ~ 19490022 (+)
G21213 NA other upstream 12511 19291445 ~ 19292341 (+)
G21202 NA other upstream 311618 18991458 ~ 18993234 (+)
G21125 rab40c,LOC107567894,LOC107690266,LOC107685905,LOC107590575,LOC103366693,LOC106591169,LOC106564622 other upstream 428725 18869266 ~ 18876127 (+)
LOC122341799 rab40c,LOC107567894,LOC107690266,LOC107685905,LOC107590575,LOC103366693 other upstream 463092 18828665 ~ 18841760 (+)
G21183 LOC107720013,LOC107721528,LOC107688135,LOC107654518,LOC107601298 other upstream 571087 18733165 ~ 18733765 (+)
ypel3 ypel3,LOC106600728,LOC103040367,LOC107686999,LOC107590566,LOC107567778,LOC105012807,LOC104942727,LOC108259066 other downstream 94350 19399408 ~ 19403176 (+)
LOC122341338 LOC107567476,LOC107754244,LOC107690310,LOC107653556,LOC107731194,LOC107570937 other downstream 759212 20064270 ~ 20069253 (+)
LOC122341546 eftud2,LOC107690313,LOC107731090,LOC107653466,LOC107567469 other downstream 789793 20094851 ~ 20113498 (+)
eftud2 eftud2,LOC107690313,LOC107731090,LOC107653466,LOC107754997 other downstream 880477 20185535 ~ 20195721 (+)
LOC122337427 ngfra,LOC107661207,LOC107708544,LOC107689096,LOC107568444,LOC107566195 other downstream 1577140 20882198 ~ 20956574 (+)

Expression


Co-expression Network