G21276


Basic Information

Item Value
gene id G21276
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056701.1
NCBI id CM032070.1
chromosome length 30200998
location 19490129 ~ 19490595 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU31631
ACTTCTATAGCTTGTTGAAACTTGCCAATCCGTGCATACACACGGCCAATATTGTCCAGGGCCCTGGATTTACTGTCCATCAGGTCGCTATGAAACAAAGCATAAACCAAACACTCCAGATGAATTGTAATTTGTTAACCAACCAAGAAAAAAGGTAGCTTTCCTGCTCCCATGGTTGCCTACCCTTTCTTGGCCAGCTCCAGATCCTTCTCATGATGATGGAGAGCCTTGTCTATGTTCCCAAGATCTATAAGTGCATTGCCTACATGAAACATAAGAGAAACTTTTAACAGAGTATCACATTTCTCATTCTTGTACTAtggtattataaatatattactacCTATGCAGCTGTGTAGGTTCCCAAGCACTTCTCTCTTATTGGGAAGCACTTCCCCGGACCACTCCTTCACCACCTTCATGAGTTCACGGGCCTTCTTCAGACCGATTTCCGTGTTGCCTGAACT

Function

GO:

id name namespace
GO:0006897 endocytosis biological_process
GO:0006898 receptor-mediated endocytosis biological_process
GO:0098657 import into cell biological_process

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU31631 True 467 lncRNA 0.43 1 19490129 19490595

Neighbor

gene id symbol gene type direction distance location
si:ch73-141c7.1 si:ch73-141c7.1,LOC107567723,LOC107590559,LOC107687003,LOC107729197,LOC107690287 coding upstream 35814 19451411 ~ 19454315 (+)
hsd17b1 hsd17b1 coding upstream 40467 19447171 ~ 19449662 (+)
LOC122341749 LOC107687002 coding upstream 44232 19443220 ~ 19445897 (+)
rabep2 LOC107690284,LOC107567756,LOC107755579,LOC107729174,LOC107687001 coding upstream 72238 19409591 ~ 19417891 (+)
si:ch211-11k18.4 si:ch211-11k18.4,ehd3,LOC107567764,LOC107755580,LOC107690281,LOC107590563,LOC107687000,LOC108411040 coding upstream 81445 19403562 ~ 19408684 (+)
nkiras2 nkiras2,LOC107755561,LOC107590605,LOC107687022,LOC107729182 coding downstream 18493 19509088 ~ 19511507 (+)
aspdh aspdh,LOC107754162,LOC107731187 coding downstream 427075 19917670 ~ 19921271 (+)
pold1 pold1,LOC107754155,LOC107653418,LOC107731044 coding downstream 440138 19930733 ~ 19941580 (+)
LOC122341334 LOC107754194,LOC107568235,LOC107690309 coding downstream 496911 19987506 ~ 19998472 (+)
LOC122341335 LOC107754194,LOC107568235,LOC107690309 coding downstream 507898 19998493 ~ 19999588 (+)
G21275 NA non-coding upstream 107 19489773 ~ 19490022 (+)
G21246 NA non-coding upstream 5745 19483501 ~ 19484384 (+)
G21269 aclya,LOC107687019,LOC107729187,LOC107590593,LOC107755575,LOC107567706,LOC107690323 non-coding upstream 17442 19470999 ~ 19472687 (+)
LOC122341657 NA non-coding upstream 30494 19455426 ~ 19459635 (+)
G21239 LOC107687002 non-coding upstream 49483 19438007 ~ 19440646 (+)
G21277 NA non-coding downstream 560 19491155 ~ 19491623 (+)
G21295 NA non-coding downstream 61018 19551613 ~ 19623289 (+)
G21539 NA non-coding downstream 299051 19789646 ~ 19789865 (+)
G21540 NA non-coding downstream 299983 19790578 ~ 19790781 (+)
G21541 NA non-coding downstream 300931 19791526 ~ 19796812 (+)
ypel3 ypel3,LOC106600728,LOC103040367,LOC107686999,LOC107590566,LOC107567778,LOC105012807,LOC104942727,LOC108259066 other upstream 86953 19399408 ~ 19403176 (+)
G21213 NA other upstream 197788 19291445 ~ 19292341 (+)
G21202 NA other upstream 496895 18991458 ~ 18993234 (+)
G21125 rab40c,LOC107567894,LOC107690266,LOC107685905,LOC107590575,LOC103366693,LOC106591169,LOC106564622 other upstream 614002 18869266 ~ 18876127 (+)
LOC122341799 rab40c,LOC107567894,LOC107690266,LOC107685905,LOC107590575,LOC103366693 other upstream 648369 18828665 ~ 18841760 (+)
LOC122341338 LOC107567476,LOC107754244,LOC107690310,LOC107653556,LOC107731194,LOC107570937 other downstream 573675 20064270 ~ 20069253 (+)
LOC122341546 eftud2,LOC107690313,LOC107731090,LOC107653466,LOC107567469 other downstream 604256 20094851 ~ 20113498 (+)
eftud2 eftud2,LOC107690313,LOC107731090,LOC107653466,LOC107754997 other downstream 694940 20185535 ~ 20195721 (+)
LOC122337427 ngfra,LOC107661207,LOC107708544,LOC107689096,LOC107568444,LOC107566195 other downstream 1391603 20882198 ~ 20956574 (+)
G22087 taok2a,LOC107755091,LOC107590788,LOC107684637 other downstream 1805107 21295702 ~ 21414286 (+)

Expression


Co-expression Network