G21661


Basic Information

Item Value
gene id G21661
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056701.1
NCBI id CM032070.1
chromosome length 30200998
location 20341072 ~ 20342296 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU32193
TTCTTCTTCTCTGGTGAGCTTTGCTCACTCTTGCTGTCTGCACCTTCATCTTCACCAGTCAAAGGATCCGAGCCATTGGACGGCTTTACAGTCTCCTGATTGGACGTCTTCCAGCCAGTGAGGTCCACGCCAGCAGCACACCACAGCTGTTGGGGTCTTTCTCCACCAGAGGGCGGCAGTACACTGGCACAGGGACATTTTTCATGCGATTATCCTCCTTCTCATTGGCCTGTGAGGACACAGGAGGACAGGGATGTTCACAAGGCCTTTGTCAATAAGATCACTGCCACACACTACAAGCCATACTCGGAGCTCCCATCATGCCCTGGGTAAGATTGCCTTGAACCAGAGCAGACAGAGAAAGGGGAAACCAGATCAGCAGATCAAAGTCTGTTAGAGGGTTACAAGGCAGACGCATGCGCAATGACAAGAGTCAATCTACTGTATAGTCAGCAAATGccactgagagacagagagagcagcaAATCATGATTCAAGGGTTTCTAAGATGGTGGACTGTTTGATACGGACCAGCATATCATGTTACACAACACTGACAGAATAGTATTTCTTACCATCTGaacttttcaatttaaattactTTCTTTTACATCGAAGACTATGCTGTCtgtatacaattaaatataaaattgcgctttcattacattttagacaTCTGGAATTTGTTTGGAACTGTTAGATCTTTAAAAAGGcaacccttgtgaaaaagaagtgggCCTAcactttaatatacttttaattcgtactttcattgtttttgaaatacgGTCAAACTATACTGTACTGACAAGCAGGTATGATAATAAAGATGTGGTAAATTCTCTTTAAACATGtgtgtcatttaaatatatttgcaatgcCACATTTCTAATGATAAAGTTGCaatactttaaagtaaaactttttttgaagAATCCTTAAGTGAGTTACgaaaaagccattaaaaaagtgtttctttcttttacttcacctaagtggccttttatttcaagaatattttttgttttttttatttttaaatataaaagggaacaaactatgttttaaattctaatcaACTATGGCTACTGCATTACTTAcctaataaatatgaaaaatgttgaaCAAAAAGACTATGTATTAAA

Function

GO: NA

KEGG:

id description
ko04080 Neuroactive ligand-receptor interaction
ko05033 Nicotine addiction

RNA

RNA id representative length rna type GC content exon number start site end site
TU32193 True 1145 lncRNA 0.38 2 20341072 20342296

Neighbor

gene id symbol gene type direction distance location
nme3 nme3,LOC107661191,LOC107689099,LOC107567334 coding upstream 7022 20331334 ~ 20334050 (+)
mrps34 mrps34,LOC107567325 coding upstream 9842 20328156 ~ 20331230 (+)
spsb3a spsb3a,spsb3,LOC107689049,LOC107670907,LOC107745892,LOC107754412 coding upstream 13520 20321945 ~ 20327552 (+)
atp6v0ca LOC107754334,LOC107567372,LOC107552490,LOC107745898 coding upstream 20782 20316318 ~ 20320290 (+)
trnac-gca_3 NA coding upstream 26741 20314260 ~ 20314331 (+)
cramp1 cramp1,LOC107661046,LOC107745824,LOC107689053 coding downstream 25149 20367445 ~ 20382139 (+)
dhrs7b dhrs7b,LOC107745957,LOC107755107,LOC107689054,LOC107661099 coding downstream 39976 20382272 ~ 20386834 (+)
LOC122341693 LOC107739398,LOC107754510,LOC107661018,LOC107689062 coding downstream 88073 20430369 ~ 20443456 (+)
LOC122342178 LOC107661000,LOC107567245,LOC798483,LOC107754527,LOC107552447 coding downstream 102612 20444908 ~ 20451990 (+)
zgc:66443 LOC107567227,LOC107754585,LOC107660992,LOC107552485,LOC107689065,LOC107739396 coding downstream 114842 20457138 ~ 20460351 (+)
G21655 NA non-coding upstream 26928 20230015 ~ 20314144 (+)
LOC122342124 NA non-coding upstream 155546 20173694 ~ 20185526 (+)
G21652 NA non-coding upstream 168070 20168636 ~ 20173002 (+)
LOC122341550 LOC107754194,LOC107690309,LOC107568235 non-coding upstream 179861 20160436 ~ 20161211 (+)
G21558 LOC107560741,LOC107567502,LOC107754185,LOC107731050,LOC107690308,LOC107653427 non-coding upstream 370653 19954076 ~ 19970419 (+)
G21669 NA non-coding downstream 51265 20393561 ~ 20393901 (+)
G21671 NA non-coding downstream 65496 20407792 ~ 20408327 (+)
G21687 NA non-coding downstream 138035 20480331 ~ 20518038 (+)
LOC122337901 NA non-coding downstream 378277 20720573 ~ 20726559 (+)
G21732 rnd2,LOC107708553,LOC107552458,LOC107754744,LOC107567027 non-coding downstream 381162 20723458 ~ 20724700 (+)
eftud2 eftud2,LOC107690313,LOC107731090,LOC107653466,LOC107754997 other upstream 145351 20185535 ~ 20195721 (+)
LOC122341546 eftud2,LOC107690313,LOC107731090,LOC107653466,LOC107567469 other upstream 227574 20094851 ~ 20113498 (+)
LOC122341338 LOC107567476,LOC107754244,LOC107690310,LOC107653556,LOC107731194,LOC107570937 other upstream 271819 20064270 ~ 20069253 (+)
ypel3 ypel3,LOC106600728,LOC103040367,LOC107686999,LOC107590566,LOC107567778,LOC105012807,LOC104942727,LOC108259066 other upstream 937896 19399408 ~ 19403176 (+)
G21213 NA other upstream 1048731 19291445 ~ 19292341 (+)
LOC122337427 ngfra,LOC107661207,LOC107708544,LOC107689096,LOC107568444,LOC107566195 other downstream 539902 20882198 ~ 20956574 (+)
G22087 taok2a,LOC107755091,LOC107590788,LOC107684637 other downstream 953406 21295702 ~ 21414286 (+)
crhr1 crhr1,LOC107662410,LOC108261365,LOC108413653,LOC107754311 other downstream 1295447 21637743 ~ 21734127 (+)
G22301 LOC107683684,LOC107754312,LOC107585098,LOC107662430,LOC107740676,LOC107582950 other downstream 1632956 21975252 ~ 21976665 (+)
wnk4b wnk4b,LOC107585056,LOC107662403,LOC107740640,LOC107683678,LOC107582920,LOC107754305,LOC108429078 other downstream 1634213 21976509 ~ 22025911 (+)

Expression


Co-expression Network