G21669


Basic Information

Item Value
gene id G21669
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056701.1
NCBI id CM032070.1
chromosome length 30200998
location 20393561 ~ 20393901 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU32202
TTTGAATAGCGGAGGTGACCAATCGCAAGCAAGGACAACACTATGGGGCTTTTAGTAGGACAAACCATTCCCAAAGCGAATGCGAACGTTGCACAAAGACTGTGGTCTGACAAAATGATTTAACTGTTTTGTAGCGTGTCCAAAACTTTCGGTCACGTTGTGAACGTGGACGCGATCAACAAGGCACTCACCCATAATGTGGTCGGTTCTCGTTTATGCGGTGAGTCCCGTCCTCGTACGGCGCTCACGGAGCTGGTGCATGAGGGGGTTGGAGGGGAGCCGTGTTATAACAACTACGCGGTGCTCGGTAACACGTGCAGGCTTCGCGCTCTCTGTCTCCC

Function

GO:

id name namespace
GO:0008015 blood circulation biological_process
GO:0003013 circulatory system process biological_process

KEGG:

id description
ko04260 Cardiac muscle contraction
ko04261 Adrenergic signaling in cardiomyocytes
ko05410 Hypertrophic cardiomyopathy
ko05414 Dilated cardiomyopathy

RNA

RNA id representative length rna type GC content exon number start site end site
TU32202 True 341 lncRNA 0.52 1 20393561 20393901

Neighbor

gene id symbol gene type direction distance location
dhrs7b dhrs7b,LOC107745957,LOC107755107,LOC107689054,LOC107661099 coding upstream 6727 20382272 ~ 20386834 (+)
cramp1 cramp1,LOC107661046,LOC107745824,LOC107689053 coding upstream 11422 20367445 ~ 20382139 (+)
nme3 nme3,LOC107661191,LOC107689099,LOC107567334 coding upstream 59511 20331334 ~ 20334050 (+)
mrps34 mrps34,LOC107567325 coding upstream 62331 20328156 ~ 20331230 (+)
spsb3a spsb3a,spsb3,LOC107689049,LOC107670907,LOC107745892,LOC107754412 coding upstream 66009 20321945 ~ 20327552 (+)
LOC122341693 LOC107739398,LOC107754510,LOC107661018,LOC107689062 coding downstream 36468 20430369 ~ 20443456 (+)
LOC122342178 LOC107661000,LOC107567245,LOC798483,LOC107754527,LOC107552447 coding downstream 51007 20444908 ~ 20451990 (+)
zgc:66443 LOC107567227,LOC107754585,LOC107660992,LOC107552485,LOC107689065,LOC107739396 coding downstream 63237 20457138 ~ 20460351 (+)
zgc:66474 LOC107754539,LOC107567164,LOC107660968 coding downstream 67474 20461375 ~ 20469846 (+)
LOC122341263 LOC107689064 coding downstream 77080 20470981 ~ 20473411 (+)
G21660 NA non-coding upstream 48205 20339891 ~ 20345356 (+)
G21661 NA non-coding upstream 51265 20341072 ~ 20342296 (+)
G21655 NA non-coding upstream 79417 20230015 ~ 20314144 (+)
LOC122342124 NA non-coding upstream 208035 20173694 ~ 20185526 (+)
G21652 NA non-coding upstream 220559 20168636 ~ 20173002 (+)
G21671 NA non-coding downstream 13891 20407792 ~ 20408327 (+)
G21687 NA non-coding downstream 86430 20480331 ~ 20518038 (+)
LOC122337901 NA non-coding downstream 326672 20720573 ~ 20726559 (+)
G21732 rnd2,LOC107708553,LOC107552458,LOC107754744,LOC107567027 non-coding downstream 329557 20723458 ~ 20724700 (+)
G21733 NA non-coding downstream 344076 20737977 ~ 20738225 (+)
eftud2 eftud2,LOC107690313,LOC107731090,LOC107653466,LOC107754997 other upstream 197840 20185535 ~ 20195721 (+)
LOC122341546 eftud2,LOC107690313,LOC107731090,LOC107653466,LOC107567469 other upstream 280063 20094851 ~ 20113498 (+)
LOC122341338 LOC107567476,LOC107754244,LOC107690310,LOC107653556,LOC107731194,LOC107570937 other upstream 324308 20064270 ~ 20069253 (+)
ypel3 ypel3,LOC106600728,LOC103040367,LOC107686999,LOC107590566,LOC107567778,LOC105012807,LOC104942727,LOC108259066 other upstream 990385 19399408 ~ 19403176 (+)
G21213 NA other upstream 1101220 19291445 ~ 19292341 (+)
LOC122337427 ngfra,LOC107661207,LOC107708544,LOC107689096,LOC107568444,LOC107566195 other downstream 488297 20882198 ~ 20956574 (+)
G22087 taok2a,LOC107755091,LOC107590788,LOC107684637 other downstream 901801 21295702 ~ 21414286 (+)
crhr1 crhr1,LOC107662410,LOC108261365,LOC108413653,LOC107754311 other downstream 1243842 21637743 ~ 21734127 (+)
G22301 LOC107683684,LOC107754312,LOC107585098,LOC107662430,LOC107740676,LOC107582950 other downstream 1581351 21975252 ~ 21976665 (+)
wnk4b wnk4b,LOC107585056,LOC107662403,LOC107740640,LOC107683678,LOC107582920,LOC107754305,LOC108429078 other downstream 1582608 21976509 ~ 22025911 (+)

Expression


Co-expression Network