G21740


Basic Information

Item Value
gene id G21740
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056701.1
NCBI id CM032070.1
chromosome length 30200998
location 20771124 ~ 20771524 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU32301
CAATCTCCAGCCTCTGCTGTATTAGAGCAGATTCAAGAAAGGAGCAGAAAAGTATCCAAATATGACCCTGTTGCTTAGACTCTTTTTGAAGCATTAGGAAAAATCACAGGAATGTTGCTGTACTGAGGGAAAGAGTAAAGAGGGAAcaaggaaaatattaaataggaCCTGTGTGTATATGGTATAACGCACAgtaaaaactcattttactGGAATGGATTTTATTCAGCCTACAGACATAAGAGCAGATCATTAAGCAGggttgtttaaaatattaagaaggtTATATTAACAGTATTAACAGTTTAGAGTAGCTTACCATCGAATGTTCACAACAcctttgaaaatgtataaaaataaaaaactaacgAGCCACATCCAATTCCCACAGCCAATCTGTA

Function

GO: NA

KEGG:

id description
ko04146 Peroxisome

RNA

RNA id representative length rna type GC content exon number start site end site
TU32301 True 401 lncRNA 0.35 1 20771124 20771524

Neighbor

gene id symbol gene type direction distance location
vat1 vat1,LOC107567018,LOC107754778 coding upstream 3525 20743788 ~ 20767599 (+)
mrc2 mrc2,LOC107754734,LOC107660711,LOC107552465,LOC107568156,LOC107689094,LOC107708551,LOC107739400 coding upstream 60078 20686238 ~ 20711046 (+)
tlk2 tlk2,LOC107567040,LOC107660745,LOC107689079,LOC107552467 coding upstream 87638 20666904 ~ 20683486 (+)
mettl2a mettl2a,LOC107739409,LOC107689110,LOC107754724,LOC107567049,LOC107660753 coding upstream 104798 20661639 ~ 20666326 (+)
itgb3a itgb3a,LOC107754700,LOC107660728 coding upstream 112581 20649947 ~ 20658543 (+)
asb16 LOC107708556,LOC107660653,LOC107689112,LOC107566969,LOC107571928 coding downstream 8691 20780215 ~ 20784388 (+)
tmub2 LOC107571926,LOC107708558,LOC107754824,LOC107566939,LOC107660620,LOC107689088 coding downstream 13009 20784533 ~ 20789004 (+)
LOC122337590 nxph3,LOC107710880,LOC107568907,LOC107660556,LOC107754835,LOC107590800 coding downstream 259100 21030624 ~ 21058249 (+)
zwi zwi coding downstream 473468 21244992 ~ 21246808 (+)
LOC122341346 LOC107582910,LOC107684633,LOC107725046,LOC107694962,LOC107590781,LOC107727455 coding downstream 544749 21316273 ~ 21329556 (+)
G21739 NA non-coding upstream 243 20770657 ~ 20770881 (+)
G21733 NA non-coding upstream 32899 20737977 ~ 20738225 (+)
LOC122337901 NA non-coding upstream 44565 20720573 ~ 20726559 (+)
G21732 rnd2,LOC107708553,LOC107552458,LOC107754744,LOC107567027 non-coding upstream 46424 20723458 ~ 20724700 (+)
G21687 NA non-coding upstream 253086 20480331 ~ 20518038 (+)
G21722 NA non-coding downstream 160 20771684 ~ 20903541 (+)
G21719 NA non-coding downstream 55338 20826862 ~ 20907982 (+)
G21761 NA non-coding downstream 185138 20956662 ~ 20957326 (+)
G22033 NA non-coding downstream 322142 21093666 ~ 21094831 (+)
G22034 NA non-coding downstream 327974 21099498 ~ 21099723 (+)
eftud2 eftud2,LOC107690313,LOC107731090,LOC107653466,LOC107754997 other upstream 575403 20185535 ~ 20195721 (+)
LOC122341546 eftud2,LOC107690313,LOC107731090,LOC107653466,LOC107567469 other upstream 657626 20094851 ~ 20113498 (+)
LOC122341338 LOC107567476,LOC107754244,LOC107690310,LOC107653556,LOC107731194,LOC107570937 other upstream 701871 20064270 ~ 20069253 (+)
ypel3 ypel3,LOC106600728,LOC103040367,LOC107686999,LOC107590566,LOC107567778,LOC105012807,LOC104942727,LOC108259066 other upstream 1367948 19399408 ~ 19403176 (+)
G21213 NA other upstream 1478783 19291445 ~ 19292341 (+)
LOC122337427 ngfra,LOC107661207,LOC107708544,LOC107689096,LOC107568444,LOC107566195 other downstream 110674 20882198 ~ 20956574 (+)
G22087 taok2a,LOC107755091,LOC107590788,LOC107684637 other downstream 524178 21295702 ~ 21414286 (+)
crhr1 crhr1,LOC107662410,LOC108261365,LOC108413653,LOC107754311 other downstream 866219 21637743 ~ 21734127 (+)
G22301 LOC107683684,LOC107754312,LOC107585098,LOC107662430,LOC107740676,LOC107582950 other downstream 1203728 21975252 ~ 21976665 (+)
wnk4b wnk4b,LOC107585056,LOC107662403,LOC107740640,LOC107683678,LOC107582920,LOC107754305,LOC108429078 other downstream 1204985 21976509 ~ 22025911 (+)

Expression


Co-expression Network