G22044


Basic Information

Item Value
gene id G22044
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056701.1
NCBI id CM032070.1
chromosome length 30200998
location 21141065 ~ 21213616 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU32748
ctttttttttttttttttttttTTTTTCACTGTATGAGAGAATAACGCTTTAATCGTTTCTgagaatggagagaaaaaacaagaaattataGATGTTAAGAAGTGATCCATGAAAGCAAAGACAAGTGCAATTTAGTCTCTTTGCATAAATTAGGAACAGCGGCTGTTGAAGACAGATGTGCGGACATTTTGTTGatctttagtttgtttttaaacctttGGTCCAGCACAGCGAGTCTGGATTCCCTGGATTTGTTTAGAAGTCAGGGCCTTCCTTCTTCAGCTTGCTGTAGTCCGTGTTCACTGCGTAGAACTTGAA

Function

GO:

id name namespace
GO:0042692 muscle cell differentiation biological_process
GO:0022607 cellular component assembly biological_process
GO:0051146 striated muscle cell differentiation biological_process
GO:0010927 cellular component assembly involved in morphogenesis biological_process
GO:0055001 muscle cell development biological_process
GO:0055002 striated muscle cell development biological_process
GO:0014866 skeletal myofibril assembly biological_process
GO:0031032 actomyosin structure organization biological_process
GO:0097435 supramolecular fiber organization biological_process
GO:0030239 myofibril assembly biological_process
GO:0070925 organelle assembly biological_process

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU32748 True 319 lncRNA 0.37 2 21141065 21213616

Neighbor

gene id symbol gene type direction distance location
LOC122337590 nxph3,LOC107710880,LOC107568907,LOC107660556,LOC107754835,LOC107590800 coding upstream 82816 21030624 ~ 21058249 (+)
tmub2 LOC107571926,LOC107708558,LOC107754824,LOC107566939,LOC107660620,LOC107689088 coding upstream 352061 20784533 ~ 20789004 (+)
asb16 LOC107708556,LOC107660653,LOC107689112,LOC107566969,LOC107571928 coding upstream 356677 20780215 ~ 20784388 (+)
vat1 vat1,LOC107567018,LOC107754778 coding upstream 373466 20743788 ~ 20767599 (+)
mrc2 mrc2,LOC107754734,LOC107660711,LOC107552465,LOC107568156,LOC107689094,LOC107708551,LOC107739400 coding upstream 430019 20686238 ~ 20711046 (+)
zwi zwi coding downstream 31376 21244992 ~ 21246808 (+)
LOC122341346 LOC107582910,LOC107684633,LOC107725046,LOC107694962,LOC107590781,LOC107727455 coding downstream 102657 21316273 ~ 21329556 (+)
LOC122337639 syngr1a,LOC107725053,LOC107684634,LOC107727456,LOC107590782,LOC107582870,LOC107694963 coding downstream 116712 21330328 ~ 21343248 (+)
LOC122341347 NA coding downstream 140751 21354367 ~ 21363114 (+)
LOC122337169 LOC107731852,LOC107571197 coding downstream 149823 21363439 ~ 21366154 (+)
G22035 NA non-coding upstream 39464 21101207 ~ 21101601 (+)
G22034 NA non-coding upstream 41342 21099498 ~ 21099723 (+)
G22033 NA non-coding upstream 46234 21093666 ~ 21094831 (+)
G21761 NA non-coding upstream 183739 20956662 ~ 20957326 (+)
G21719 NA non-coding upstream 233083 20826862 ~ 20907982 (+)
G22046 zwi non-coding downstream 33988 21247604 ~ 21343269 (+)
LOC122337868 NA non-coding downstream 34494 21248110 ~ 21251430 (+)
LOC122337912 fam57b,LOC107684641,LOC107678875,LOC107754912,LOC107710888 non-coding downstream 40130 21253746 ~ 21269492 (+)
LOC122337857 NA non-coding downstream 76733 21290349 ~ 21291935 (+)
G22094 tcap,LOC107684635,LOC107590785,LOC107582871,LOC107727457,LOC107694957 non-coding downstream 131513 21345129 ~ 21493498 (+)
LOC122337427 ngfra,LOC107661207,LOC107708544,LOC107689096,LOC107568444,LOC107566195 other upstream 184491 20882198 ~ 20956574 (+)
eftud2 eftud2,LOC107690313,LOC107731090,LOC107653466,LOC107754997 other upstream 945344 20185535 ~ 20195721 (+)
LOC122341546 eftud2,LOC107690313,LOC107731090,LOC107653466,LOC107567469 other upstream 1027567 20094851 ~ 20113498 (+)
LOC122341338 LOC107567476,LOC107754244,LOC107690310,LOC107653556,LOC107731194,LOC107570937 other upstream 1071812 20064270 ~ 20069253 (+)
ypel3 ypel3,LOC106600728,LOC103040367,LOC107686999,LOC107590566,LOC107567778,LOC105012807,LOC104942727,LOC108259066 other upstream 1737889 19399408 ~ 19403176 (+)
G22087 taok2a,LOC107755091,LOC107590788,LOC107684637 other downstream 82086 21295702 ~ 21414286 (+)
crhr1 crhr1,LOC107662410,LOC108261365,LOC108413653,LOC107754311 other downstream 424127 21637743 ~ 21734127 (+)
G22301 LOC107683684,LOC107754312,LOC107585098,LOC107662430,LOC107740676,LOC107582950 other downstream 761636 21975252 ~ 21976665 (+)
wnk4b wnk4b,LOC107585056,LOC107662403,LOC107740640,LOC107683678,LOC107582920,LOC107754305,LOC108429078 other downstream 762893 21976509 ~ 22025911 (+)
hdac5 hdac5,LOC107667756,LOC107582878,LOC107585055 other downstream 1055370 22268986 ~ 22336227 (+)

Expression


Co-expression Network