G22198


Basic Information

Item Value
gene id G22198
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056701.1
NCBI id CM032070.1
chromosome length 30200998
location 21636123 ~ 21636570 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU32956
tgacagaatagtcatttttgggtgaactatccattttaagtttgaaaaatacattttgtaaaagagctttttgttttaagaatatGTTTCCGTGAATGCTCTAAAATGCTGTAATGctaaagtacaaaaatgttaataacaaGTTGAATCGTCGACCGAACTGTGGACTCGTTGAGGTAAATGCCAATCGTTTCATTCTTTATAAAGCAACTGGATTAAAGTCAATTAAAGTAGTTATAAAGAAACTGGAATGAACAACCGCGTGTGATATGGAGAATGATTGAATGCAGCCAGTTGTTCTTTTCGACACCTTTGTCCGGGACTTTCTGTGCTCTTGTGACACCTGACCCTGAGAACGCATTTAAAATCCAGAAAGAGGACAGCGTCTGGAAACACATGCTCAGTGCTCAGTGCCACAAACAATACACAACTCAAAAGCTGAAACAGC

Function

NR:

description
PREDICTED: suppressor of cytokine signaling 6

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU32956 True 448 lncRNA 0.38 1 21636123 21636570

Neighbor

gene id symbol gene type direction distance location
LOC122341350 LOC107738996 coding upstream 185414 21447171 ~ 21450709 (+)
LOC122340007 LOC107710878,LOC107678868,LOC107725047,LOC107590786,LOC107582907,LOC107684649 coding upstream 191382 21441922 ~ 21444741 (+)
LOC122341349 LOC107725047,LOC107590786,LOC107678868,LOC107710878,LOC107684649,LOC107582907,LOC107725048,LOC107684648 coding upstream 198168 21429682 ~ 21437955 (+)
LOC122337825 LOC107590788,LOC107684637,LOC107710882,LOC107678872 coding upstream 233005 21389147 ~ 21403118 (+)
LOC122337169 LOC107731852,LOC107571197 coding upstream 269969 21363439 ~ 21366154 (+)
cdc27 cdc27,LOC107740649,LOC107754304 coding downstream 146886 21783456 ~ 21795403 (+)
kansl1b LOC107740647,LOC107662409,LOC107754301,LOC107694965 coding downstream 160450 21797020 ~ 21842872 (+)
scn4ab scn4ab,LOC107754300,LOC107683681,LOC107582874 coding downstream 262736 21899306 ~ 21918705 (+)
gh1 LOC107585059,LOC107740644,LOC107662423 coding downstream 287919 21924489 ~ 21926112 (+)
rdm1 zgc:103564,LOC107585100,LOC107662434,LOC107740678 coding downstream 290296 21926866 ~ 21929640 (+)
G22197 NA non-coding upstream 44 21635744 ~ 21636079 (+)
G22094 tcap,LOC107684635,LOC107590785,LOC107582871,LOC107727457,LOC107694957 non-coding upstream 142625 21345129 ~ 21493498 (+)
G22084 LOC107684649,LOC107590786,LOC107725047,LOC107582907,LOC107678868,LOC107710878 non-coding upstream 252999 21381808 ~ 21383124 (+)
G22046 zwi non-coding upstream 292854 21247604 ~ 21343269 (+)
G22201 NA non-coding downstream 97568 21734138 ~ 21734422 (+)
LOC122341843 NA non-coding downstream 399312 22035882 ~ 22089931 (+)
G22340 atp5g1,LOC107740625,LOC107662391,LOC107582887,LOC107585044 non-coding downstream 874858 22511428 ~ 22672911 (+)
G22554 ddx5,LOC107695114 non-coding downstream 1303677 22940247 ~ 23028505 (+)
G22581 LOC107740652,LOC107662412,LOC107582935,LOC107687786,LOC107710056,LOC107578312,LOC107577241 non-coding downstream 1452903 23089473 ~ 23095422 (+)
G22087 taok2a,LOC107755091,LOC107590788,LOC107684637 other upstream 221837 21295702 ~ 21414286 (+)
LOC122337427 ngfra,LOC107661207,LOC107708544,LOC107689096,LOC107568444,LOC107566195 other upstream 679549 20882198 ~ 20956574 (+)
eftud2 eftud2,LOC107690313,LOC107731090,LOC107653466,LOC107754997 other upstream 1440402 20185535 ~ 20195721 (+)
LOC122341546 eftud2,LOC107690313,LOC107731090,LOC107653466,LOC107567469 other upstream 1522625 20094851 ~ 20113498 (+)
LOC122341338 LOC107567476,LOC107754244,LOC107690310,LOC107653556,LOC107731194,LOC107570937 other upstream 1566870 20064270 ~ 20069253 (+)
crhr1 crhr1,LOC107662410,LOC108261365,LOC108413653,LOC107754311 other downstream 1173 21637743 ~ 21734127 (+)
G22301 LOC107683684,LOC107754312,LOC107585098,LOC107662430,LOC107740676,LOC107582950 other downstream 338682 21975252 ~ 21976665 (+)
wnk4b wnk4b,LOC107585056,LOC107662403,LOC107740640,LOC107683678,LOC107582920,LOC107754305,LOC108429078 other downstream 339939 21976509 ~ 22025911 (+)
hdac5 hdac5,LOC107667756,LOC107582878,LOC107585055 other downstream 632416 22268986 ~ 22336227 (+)
G22344 rapgefl1,LOC107585050,LOC107662398,LOC107740631,LOC107717207,LOC107667751 other downstream 892419 22528989 ~ 22530060 (+)

Expression


Co-expression Network