LOC122341356 (il2rb,LOC107695139,LOC107583317)


Basic Information

Item Value
gene id LOC122341356
gene name il2rb,LOC107695139,LOC107583317
gene type misc
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056701.1
NCBI id CM032070.1
chromosome length 30200998
location 22899333 ~ 22908135 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU33447
gaggaggatgaagagttGGGGGTCAggtagacagagagacagacctCAGCATCCATGGTGCCTGCGCAGAAAGCTGTAAGTGAAGGATCCAAGAAGTGATGAAGGGTCAATGGCATACTTCTTTCTTCACCTTGATCATATTTTATGGAACCGGCCAGTCCAGAAATACGCAAACAGAAGGTCTGGCCTGTGTGAGCGATTATGTGACCGACATTTCTTGTGTGTGGTGGAACTCGACAGTTTCGTCTGACCAGCGATGCGTGCTTGGGGGGAAATGTGACATAAAAAGATGTGTTTCTAGATCCTGTGAACTGCTGCCACTGAGCAATCAATCACCTTCTAGGAGAAGCTGTTCTTTAAGCTTTGACAAACATCACTTTTTTTCGTCAATAAGTTCTGGTTGAATGTAACCTGTAATGGATCTGTCGTCACTAAAATACATTATCAGCCTAGCC
>TU33448
gaggaggatgaagagttGGGGGTCAggtagacagagagacagacctCAGCATCCATGGTGCCTGCGCAGAAAGCTGTAAGTGAAGGacATTGTTCAAAACATCATCTTCCTCATGGGCAGCGCACCGATTTAAAGGGCTGTTACTCTTCGGGCGTCCCGAGTTTGAGTCCCGGCTTGCGGACCTCTCCCGACCCTTCGCTCTTTACTTGCCGTCTAATAACTGTCGAATCATAATAAAGCAAAGATGCCTTTTTTGAAAAAAGGTCTAAAAGAAAATCGTACAGGTCTGGGACAGTATGAGAATACGGAAGCCTGTTCAGAACGGAGAGATGCGTAAACTGTAAATTGTGAGCTGTAAAACAAATTCGTATTGCGAGAAACTAATTGTGCA
>TU33451
GAGCGCACCTCGTGTCTTCGCATCctcttttgaaatatttttaacggctgtgtgtttttctgttttgttgttaagTTAAGACCCAACCCCCAGATATGCCCACTGTAAGTGAGGACAGAATAACTTGGAGTAAAGGCAGTAACTTTCCAGAAGCCATAAAATCTTATGAATTTCAGCTGCAGGTTAAAGCCTTACATACAAGCTGGGAGACAGCAACACTTAGGAATTGCTCTCAGGAAAATGACGTGCAGCTGGACCATAATAAACTGACTGTGGGAGAGGTGTACCAGGCCAGGGTACGTGTGAAGCCCGTTGAGCCCTTGGATCATGGTTATTTTCGTGGGGAATGGAGCGACTGGAGTCCTACTGTGTCCTGGAGATCTGAGATTGGAAAGCCACCGATGAAACCAAGATATGATGTATCTCCATCAGtgCCTGATGATATTCGTATTGTTCTGATCATTGGAAGCCTCATCTTGCTTGTTCTTACTTCTCTTTGTTTGGTCATCTGTAAACTAAAGAAAAGCAAACGGTCAATAAAACCAAACAATCAGCATGTTCCCGACCCCTCCAAATATTTCCAGCCTCTTCACACCGTTCACG
>TU33452
TAGACAGCAACACTTAGGAATTGCTCTCAGGAAAATGACGTGCAGCTGGACCATAATAAACTGACTGTGGGAGAGGTGTACCAGGCCAGGGTACGTGTGAAGCCCGTTGAGCCCTTGGATCATGGTTATTTTCGTGGGGAATGGAGCGACTGGAGTCCTACTGTGTCCTGGAGATCTGAGATTGGAAAGCCACCGATGAAACCAAGATATGATGTATCTCCATCAGtgCCTGATGATATTCGTATTGTTCTGATCATTGGAAGCCTCATCTTGCTTGTTCTTACTTCTCTTTGTTTGGTCATCTGTAAACTAAAGAAAAGCAAACGGTCAATAAAACCAAACAATCAGCATGTTCCCGACCCCTCCAAATATTTCCAGCCTCTTCACACCGTTCACG
>XM_043234705.1
gaagagttGGGGGTCAggtagacagagagacagacctCAGCATCCATGGTGCCTGCGCAGAAAGCTATCCAAGAAGTGATGAAGGGTCAATGGCATACTTCTTTCTTCACCTTGATCATATTTTATGGAACCGGCCAGTCCAGAAATACGCAAACAGAAGGTCTGGCCTGTGTGAGCGATTATGTGACCGACATTTCTTGTGTGTGGTGGAACTCGACAGTTTCGTCTGACCAGCGATGCGTGCTTGGGGGGAAATGTGACATAAAAAGATGTGTTTCTAGATCCTGTGAACTGCTGCCACTGAGCAATCAATCACCTTCTAGGAGAAGCTGTTCTTTAAGCTTTGACAAACATGTagTTAAGACCCAACCCCCAGATATGCCCACTGTAAGTGAGGACAGAATAACTTGGAGTAAAGGCAGTAACTTTCCAGAAGCCATAAAATCTTATGAATTTCAGCTGCAGGTTAAAGCCTTACATACAAGCTGGGAGACAGCAACACTTAGGAATTGCTCTCAGGAAAATGACGTGCAGCTGGACCATAATAAACTGACTGTGGGAGAGGTGTACCAGGCCAGGGTACGTGTGAAGCCCGTTGAGCCCTTGGATCATGGTTATTTTCGTGGGGAATGGAGCGACTGGAGTCCTACTGTGTCCTGGAGATCTGAGATTGGAAAGCCACCGATGAAACCAAGATATGATGTATCTCCATCAGtgCCTGATGATATTCGTATTGTTCTGATCATTGGAAGCCTCATCTTGCTTGTTCTTACTTCTCTTTGTTTGGTCATCTGTAAACTAAAGAAAAGCAAACGGTCAATAAAACCAAACAATCAGCATGTTCCCGACCCCTCCAAATATTTCCAGCCTCTTCACACCGTTCACGGTGAAACTTCCAGttctCAGGTTTCTCTTCATATGCAAAATCTTACCCATACAAactcacacgcgcacacacacacacacacacactcaaatgttGCTTTTCTTTCAAATGCCTACTCATATCATGTTTCAGCAAgccacagaacacacacacacacacacacacacacacacacactgaccacaTGTGCATTTCCTCCTGCACAGAAATGGCTGGGCTGTCAGAATTCTGTTGGGCCTTTTCTTACCCTTCAGTCGTGTGACGATATCTCACCTGTAGAGGTCAGCAATTTTTGGGACGTGTCCTTGATGGATCCCGCCGCTCAGATGTCTGCTGCAGTGTTCAATCAGGTGGACTCTGGGCTGGAGAACAGCGGCACTAGTCACGCGTCCTCATCCGTTTTCTCTAACATGGGTTACTTCTACAGCAAATCCAACAGAGGCTCTCTTTATCTCGAATCCTGCCCCGTGTACTTCAGCTACCACCCCGAGGAAGCCACGAGCTCCACTGCGTCCTCACCCGGGTCTTCTTACGACTGTTTGCAAACCCCAAGTTACCAGACGGATCAGCCCGTGAGCCCGGATTCGGGGTTCGGCATGGCCGGAGAGGAGCTCTGTGAGGACGAGCAGGAAGATGAAGATTGGAGGGACGCCGAGACGTGTGCGGTGGAAGGACAGGCGCTGATCTCCTTCATCATGTCGCTGTCGCAGGGTTCCCACAGTGCTGTTCGCCGGCCGGAGAGTTTGTCTCCGGTGGCCGTCAGCACGCCGCTGTCTGAACCTGCGAGAGCGAGCGGCGGCGCGTCCGGCTCGGAGCCGGCAGAGGCCGCCGTGgtcagagcctcctccatgatCGAGCCCTGCGGAAGCGGCTACCTGACCCTGAAGGAGATGCAGAAATACAGCAACAAATCCATCTGAGC

Function

symbol description
il2rb Predicted to enable cytokine receptor activity. Predicted to be located in plasma membrane. Predicted to be integral component of membrane. Human ortholog(s) of this gene implicated in asthma; immunodeficiency 63; myasthenia gravis; and visceral leishmaniasis. Orthologous to human IL2RB (interleukin 2 receptor subunit beta).

NR:

description
PREDICTED: interleukin-2 receptor subunit beta isoform X2

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU33447 False 455 lncRNA 0.45 5 22899333 22903541
TU33448 False 391 lncRNA 0.46 2 22899333 22901102
TU33451 False 603 TUCP 0.44 4 22905377 22906695
TU33452 False 397 lncRNA 0.46 3 22905742 22906695
XM_043234705.1 True 1808 mRNA 0.50 9 22899342 22908135

Neighbor

gene id symbol gene type direction distance location
hoxb1a LOC107687776,LOC107585038,LOC107717202,LOC107740618,LOC107662382,LOC107582890 coding upstream 116238 22779834 ~ 22783095 (+)
hoxb3a hoxb3a,LOC107687775,LOC107582888,LOC107740615,LOC107717222,LOC107662380,LOC107585040 coding upstream 133797 22713873 ~ 22765536 (+)
hoxb4a hoxb4a,LOC107740620,LOC107585041,LOC107662385,LOC107687779,LOC107582891 coding upstream 158662 22735939 ~ 22740671 (+)
hoxb6a hoxb6a,hoxb6,LOC107585042,LOC107662387,LOC107582892 coding upstream 177754 22719460 ~ 22721579 (+)
hoxb7a hoxb7a,LOC107740671,LOC107662388,LOC107717221,LOC107585088,LOC107687793,LOC107582958 coding upstream 187276 22707994 ~ 22712057 (+)
LOC122342153 c1qtnf6,c1qtnf6a,LOC107695119,LOC107723613,LOC107672153,LOC107583300 coding downstream 4431 22912566 ~ 22918961 (+)
cbx1a cbx1a,LOC107585039,LOC107662389,LOC107687782,LOC107710057,LOC107582894 coding downstream 176011 23084146 ~ 23090936 (+)
copz2 LOC107740614,LOC107662379,LOC107585036,LOC105013247,LOC106607483,LOC106600844 coding downstream 195622 23103757 ~ 23114098 (+)
LOC122333434 LOC107710041,LOC107740651,LOC107585073,LOC107662378,LOC107687794 coding downstream 220649 23128784 ~ 23135038 (+)
atf4b atf4b,LOC107585034,LOC107740611,LOC107710053,LOC107662376,LOC107656792,LOC107582897 coding downstream 256227 23164362 ~ 23167244 (+)
G22340 atp5g1,LOC107740625,LOC107662391,LOC107582887,LOC107585044 non-coding upstream 226422 22511428 ~ 22672911 (+)
LOC122341843 NA non-coding upstream 809402 22035882 ~ 22089931 (+)
G22201 NA non-coding upstream 1164911 21734138 ~ 21734422 (+)
G22198 NA non-coding upstream 1262763 21636123 ~ 21636570 (+)
G22197 NA non-coding upstream 1263254 21635744 ~ 21636079 (+)
G22554 ddx5,LOC107695114 non-coding downstream 32112 22940247 ~ 23028505 (+)
G22581 LOC107740652,LOC107662412,LOC107582935,LOC107687786,LOC107710056,LOC107578312,LOC107577241 non-coding downstream 181338 23089473 ~ 23095422 (+)
G22582 LOC107687786,LOC107710056,LOC107662412,LOC107740652,LOC107585075,LOC107582935,LOC105912825,LOC103364773 non-coding downstream 192809 23100944 ~ 23148618 (+)
G22584 NA non-coding downstream 206143 23114278 ~ 23116840 (+)
LOC122341922 LOC107695122,LOC107583308 non-coding downstream 488366 23396501 ~ 23400922 (+)
hoxb2a hoxb2,hoxb2a,LOC107585087,LOC107662381,LOC107582889,LOC107687781 other upstream 128731 22765647 ~ 22770602 (+)
hoxb5a hoxb5a,LOC107717200,LOC107662384,LOC107687777,LOC108413114,LOC107740619 other upstream 173175 22722022 ~ 22726158 (+)
G22329 LOC107585049,LOC107740630,LOC107662396,LOC107582928,LOC107717208 other upstream 352125 22546158 ~ 22547208 (+)
G22344 rapgefl1,LOC107585050,LOC107662398,LOC107740631,LOC107717207,LOC107667751 other upstream 369273 22528989 ~ 22530060 (+)
hdac5 hdac5,LOC107667756,LOC107582878,LOC107585055 other upstream 563106 22268986 ~ 22336227 (+)
prr15la prr15la,LOC107710040,LOC107585086,LOC107662431,LOC107582938,LOC108412372 other downstream 250084 23158219 ~ 23163716 (+)
dnal4a dnal4a,dnal4,LOC107662365,LOC107585028,LOC107690743,LOC107740666,LOC107710037 other downstream 430244 23338379 ~ 23343640 (+)
LOC122341898 LOC107662363 other downstream 435829 23343964 ~ 23361942 (+)
LOC122341907 NA other downstream 495306 23403441 ~ 23408814 (+)
zmp:0000000912 LOC107748810,LOC107695116,LOC107583322,LOC107695109,LOC107583307,LOC107709636,LOC107672113,LOC107602301 other downstream 516486 23424621 ~ 23431766 (+)

Expression


Co-expression Network