G17177


Basic Information

Item Value
gene id G17177
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000001
NCBI id null
chromosome length 13537560
location 7962777 ~ 7963902 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU19268
GAAGAAGAGAGCTAGTTCAAGACGAGCGTTTATGGTTAAAACGTATATAATTTTAAATTTTTTTTAGAAAATGACCGATCGTTTCGCTAGATAAGACCCTTATTCCTCGTCTGGGATCGCATAGAGCTCTTTGAAGCTGCACTGAAACTGCAATTTTGACCTTCAACCGTTTGGAGTCCATTGAAGTCCACTATAAGAAGAATATTCCTGGAATGTTTGCACCAAAAACCTTAATTTCTTTTCGACTGAAGAAAGAAAGACATGAACATCTTGGATGACATGGGGATCCAAGCGGTGTCTCATGCCTTCTGCTCTTCCTTCCTTCACAAAAAGTCTGCACAAACTCCATAGACAATCAACAGACAAATTGAAGCACAGTTTTATCAATATTTTACATGTTATATTGCAAAAATTAAATGTGAGAACCAAAGACAATGCTTCAAATAACAAGTTAGTAGTGCTCGAAGTCCCTTTTCTTTCACAGAAGGAATGTTATTTAAGTCTTTTTTTTTTTTTTTTTAAGTGAGAAGTTTGCTTGACATTCAGACCAACAAAACCCACTTTGCATTCACTCTTTTAATTATTCATGACCTTTATACATTTGATTCTGGCTTCTGTGGGAAAACATTCCCCCCACCAATTAACCAACCACAGACTGGGCATGCTGCCCAGCGAGGTCCTACACTATCAATTCATCAGAGCTTTACTGAGACAGAGGGGGGAAAGCCTTGTCTTGTGAGTTTACTGCACCTGGGGCGGTGGGCTGTCTGAACGCGGGTGGGATTCTGTTTTCATCAACAGGATTAAGCCCAATAAATCCGTTTCTGGGATTAAGATTGGGATCTGTTTGGACTACTTAGCAGTGGCTAATACAGTGGTGTTTCTTCTCTAATTGTACTGCTGTTTCAGCTGCAACTATTCATCGCCTGACTTTTCAATCCCTTGTAAATAGAAACACCCAGGTCAAGTGACAGTTTTTCAACAAAGCATAGCATGGCATCTCCTCTTCAGTTACGCATGTGAC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU19268 True 1024 lncRNA 0.37 2 7962777 7963902

Neighbor

gene id symbol gene type direction distance location
CI01000001_07935720_07951221 PLEKHN1 coding upstream 10868 7935720 ~ 7951909 (+)
CI01000001_07908382_07926320 KLHL17 coding upstream 36300 7908382 ~ 7926477 (+)
CI01000001_07811962_07871073 SAMD11 coding upstream 91704 7811962 ~ 7871073 (+)
CI01000001_07678904_07760870 RERE, REREA coding upstream 201907 7678904 ~ 7760870 (+)
CI01000001_07577777_07584809 ENO1, ENO1A, ENOA coding upstream 377968 7577725 ~ 7584809 (+)
CI01000001_08091363_08093148 AGRN coding downstream 126020 8089922 ~ 8093262 (+)
CI01000001_08113500_08119591 NA coding downstream 149262 8113164 ~ 8119707 (+)
CI01000001_08174175_08184832 NA coding downstream 209381 8173283 ~ 8185874 (+)
CI01000001_08208872_08234456 NA coding downstream 244181 8208083 ~ 8234580 (+)
CI01000001_08248565_08260072 AGRN coding downstream 284663 8248565 ~ 8260101 (+)
G17103 NA non-coding upstream 56753 7874209 ~ 7906024 (+)
G17137 NA non-coding upstream 170165 7792204 ~ 7792612 (+)
G17106 NA non-coding upstream 266734 7597981 ~ 7696043 (+)
G17116 NA non-coding upstream 386932 7575512 ~ 7575845 (+)
G16997 NA non-coding upstream 455896 7505945 ~ 7506881 (+)
G17233 NA non-coding downstream 64332 8028234 ~ 8030550 (+)
G17236 NA non-coding downstream 71077 8034979 ~ 8035184 (+)
G17216 NA non-coding downstream 74342 8038244 ~ 8038643 (+)
G17252 NA non-coding downstream 117610 8081512 ~ 8081742 (+)
G17215 NA non-coding downstream 315451 8279353 ~ 8282894 (+)
CI01000001_07531945_07539781 NA other upstream 422191 7531541 ~ 7540586 (+)
G15995 NA other upstream 2247826 5711885 ~ 5714951 (+)
CI01000001_05279884_05287123 NA other upstream 2672821 5279837 ~ 5287698 (+)
G15794 NA other upstream 2898073 5061218 ~ 5064704 (+)
CI01000001_03618075_03620436 NA other upstream 4341326 3618075 ~ 3621451 (+)
G17234 NA other downstream 68222 8032124 ~ 8032483 (+)
G17353 NA other downstream 1252120 9216022 ~ 9228859 (+)
G17354 NA other downstream 1270561 9234463 ~ 9240677 (+)
CI01000001_09435836_09436037 NA other downstream 1454426 9435836 ~ 9436373 (+)
G18896 NA other downstream 2275998 10239900 ~ 10241492 (+)

Expression


Co-expression Network