dnal4a (dnal4a,dnal4,LOC107662365,LOC107585028,LOC107690743,LOC107740666,LOC107710037)


Basic Information

Item Value
gene id dnal4a
gene name dnal4a,dnal4,LOC107662365,LOC107585028,LOC107690743,LOC107740666,LOC107710037
gene type misc
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056701.1
NCBI id CM032070.1
chromosome length 30200998
location 23338379 ~ 23343640 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU33611
TGACAACACTAATAGAGGAACTTGTCTGTGCACAGCGCTACAGAGCGTAAAGAAAAGGATGGCAGAAACTGGTGATGGTAAAAAAGAGGATGCCGACTACAAAAGACTGCAAAGCTTTCCACTCATCAGGCACACAGATATGCCTGAAGAGATGCGTGTGGAGACGATGGAGCTTTGCGTCACAGCCTGCGAGAAATTTGCCTCCAACAATGAGAGCGCTGCCAAGATGATCAAGGAGTCCATGGATAAGAAGTTTGGCAGTTCGTGGCATGTGGTGATCGGCGAGGGGTTTGGGTTCGAGGTGAGCCATGAAGTCAGGAACCTGCTCTACATGTTCTTTGGGGGAAGTCTGGCCGTATGCGTTTGGAAATGCTCCTGATGCTGCTTCCTGCCCACATAATCGCCACTGTGAGATATTTATACTCACGGATCTGTCCTAACTATGCAGCCCTATTTGACTTGAGATGCgtactgtatgcgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgcgcgagtgaaATTGTATGGCGGGGGGGGGGATTCAGATTCTTGTGCACTTCTTCAGATCactctttttttgtcttacaTTTTAAAGGCTTTAATTGTTAGCCATAAACACAGATTTCAAGGAATTTTGttaacttttaaaatcattttaatcgaACCTATGGAGTTGATTGCAACCGACTGCTGGACctcatttagaaaatgtttctttttttttcctcttcctgcgctgtttactttcttttaaaatgtttgtcttttaatGTGTGCAATTCATTATAGCACGTTATTCCAAAGAAAACTTTTGCCTTTgtaatctttcatcaaaatgtactCTAATTTATGTGATTTTGAATCCCTTATTTTCAAGTTTCTCCTTATTAAGCATTCATCActgttgaatgaatgaatgaactctGGTTTGTTAAGCTCATTTTAATGGCCAGTCAGTTCAAACTGGATAAAAGTGCAGCCCCACCctctttttttaactaaatgttgtttttcattcagaaattaatcattattttttcactgtaaagtGTACATTGTGTACATTAATCCAAAAAAGCCTTTTCTGACCTCACGTGTGCTATTGAATAACATTTACTAATAAGCAAATagctatttattcattcattcaggtATGTAATGCTCACTTTACACAGTCCTGCTCTTGATGATGAATATATCGTTTCATTTGGGAATAGACTACTGTTAAAAGGTTTGAGTGCGGATATCATAAGTTCACTAAGGTTGAGAAAAAACGgtcaaaaacactaatattgggaaatattacGATTTTAAAACCAGTGTTTTCTAATTTGCTGTGATGTCAGAGTTAAAGTTTGAGCTGTCGTTACAACAGACTTCATGATCCTTCAGTAACAAATCGttctaaaaaccttttttgttttttaatcaatgttgaaaacagagAAGCTGCAGTATGTATTGTCCGTGATTATTCGATGAACAGAAAGTCTAAAAGAAGTGCTTATTTTAAATCTTGTGCAATCTAATGAATGTCTAAATGTGTCCTTGaagaatgaaaatatgaatttcttaaaaaaaacaacagctcaaacctttgaacagtagtcTTACATTTCTGAGGTAAAATGCATTGTAAGCAGCAATTTTAATGATAAAGaatgacaaatataaaaaatgtaaagaaagttTAGGACCTTTACAGTTAAATGTAGttgtgtgtctgtttgaatgcatttatgaGTGAATGTACAGTAATGTACTGAAGCGTCAGTCTGATTTTCGCTCTCTTTGAGGCTCTGAGTATTCTGTTGTATTTGTCTGGCAGGTTGTCGTAGGAGTGTGTTTGCTGTGTGAGGCTGATCAGGACAGAATGTGTGTCGTTGCACTCCATTTcatgtgtcattttaaaaaatgcattcactctctctctctttttgtctttgtctgtctCCTTCATTCTGTTTCCTGTCCAGCAGTGTCTCTCTCAGTGGGCTGCTCGACCACCTGTTTCAGattcctctttctcttttatcgttcgctctctttttttcccccctatcCTTTCGCTGTCACCCCAAGAATCTTACGCCCTGTCCTCTTCCCCCTCTTTACGTAACCAGCATTTGAAGTGTGTGATTACTTGAATGTTATATAAATTTTCAGAacttgatttctgaaggtttcTGTAGTCATGCAATAATACAGCTactacttttttattcatttttttcggTACGACATCTCAGCCCTGAATTCCATAAATGTCATTAACTGTCAAAATGTGGTACTGTTTAAAACCTTAAACCTGTTCTAACAGTCTTTAGCTCTATTTGGATGGTACATTATACATGCTTATGTAACggaaatgtttgtatttttattatgggAGGAATTTCTGTGCCATGAGTGTTATTGAATGAAATCATATAAATGGAGGATGGAAAACTTAAATTTCCCATCTTGGTAGCTCCGCCTCCAAACCATTGTTTCTGTCCAGCTCAGTCATGCCACTGATTGCAATTGTTTAATGCAGCTAAGGTCCAAGTGCTAAAGTGAACAGTTTACCTTTAAGTGCACATGAATGAAACAGAtgcaaatgtcatttaaatttttttttttttttttttttttttgaggtcaCTGCTAATTTAAAAGATTGCTGTTTTGACACTTTTGATATATAAACCTAACTTGCTGCCAAGTTCATCAGTTTGATTTCAAAGGATGTATGCAAATATGTTACAGTCGTCATCCTGAGAAACGGTTACGAGTACAAACAGTGCTTTTGATTTCAGCTGAGATTAAATGCTGCAAGATTTTATCAGAATGTTCCATCTTTCTTCCTGCAAtgtttaaatgcagtaaaaacctttaatgactttattatggtattttattcaattttcaattatttttgtcaA
>XM_043235619.1
GTGGGTCGGAGGTTGCCGAGGCCGGTGTGTCTCCATGACAACACTAATAGAGGAACTTGTCTGTGCACAGCGCTACAGAGCGTAAAGAAAAGGATGGCAGAAACTGGTGATGGTAAAAAAGAGGATGCCGACTACAAAAGACTGCAAAGCTTTCCACTCATCAGGCACACAGATATGCCTGAAGAGATGCGTGTGGAGACGATGGAGCTTTGCGTCACAGCCTGCGAGAAATTTGCCTCCAACAATGAGAGCGCTGCCAAGATGATCAAGGAGTCCATGGATAAGAAGTTTGGCAGTTCGTGGCATGTGGTGATCGGCGAGGGGTTTGGGTTCGAGGTGAGCCATGAAGTCAGGAACCTGCTCTACATGTTCTTTGGGGGAAGTCTGGCCGTATGCGTTTGGAAATGCTCCTGATGCTGCTTCCTGCCCACATAATCGCCACTGTGAGATATTTATACTCACGGATCTGTCCTAACTATGCAGCCCTATTTGACTTGAGATGCgtactgtatgcgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgcgcgagtgaaATTGTATGGCGGGGGGGGGGATTCAGATTCTTGTGCACTTCTTCAGATCactctttttttgtcttacaTTTTAAAGGCTTTAATTGTTAGCCATAAACACAGATTTCAAGGAATTTTGttaacttttaaaatcattttaatcgaACCTATGGAGTTGATTGCAACCGACTGCTGGACctcatttagaaaatgtttctttttttttcctcttcctgcgctgtttactttcttttaaaatgtttgtcttttaatGTGTGCAATTCATTATAGCACGTTATTCCAAAGAAAACTTTTGCCTTTgtaatctttcatcaaaatgtactCTAATTTATGTGATTTTGAATCCCTTATTTTCAAGTTTCTCCTTATTAAGCATTCATCActgttgaatgaatgaatgaactctGGTTTGTTAAGCTCATTTTAATGGCCAGTCAGTTCAAACTGGATAAAAGTGCAGCCCCACCctctttttttaactaaatgttgtttttcattcagaaattaatcattattttttcactgtaaagtGTACATTGTGTACATTAATCCAAAAAAGCCTTTTCTGACCTCACGTGTGCTATTGAATAACATTTACTAATAAGCAAATagctatttattcattcattcaggtATGTAATGCTCACTTTACACAGTCCTGCTCTTGATGATGAATATATCGTTTCATTTGGGAATAGACTACTGTTAAAAGGTTTGAGTGCGGATATCATAAGTTCACTAAGGTTGAGAAAAAACGgtcaaaaacactaatattgggaaatattacGATTTTAAAACCAGTGTTTTCTAATTTGCTGTGATGTCAGAGTTAAAGTTTGAGCTGTCGTTACAACAGACTTCATGATCCTTCAGTAACAAATCGttctaaaaaccttttttgttttttaatcaatgttgaaaacagagAAGCTGCAGTATGTATTGTCCGTGATTATTCGATGAACAGAAAGTCTAAAAGAAGTGCTTATTTTAAATCTTGTGCAATCTAATGAATGTCTAAATGTGTCCTTGaagaatgaaaatatgaatttcttaaaaaaaacaacagctcaaacctttgaacagtagtcTTACATTTCTGAGGTAAAATGCATTGTAAGCAGCAATTTTAATGATAAAGaatgacaaatataaaaaatgtaaagaaagttTAGGACCTTTACAGTTAAATGTAGttgtgtgtctgtttgaatgcatttatgaGTGAATGTACAGTAATGTACTGAAGCGTCAGTCTGATTTTCGCTCTCTTTGAGGCTCTGAGTATTCTGTTGTATTTGTCTGGCAGGTTGTCGTAGGAGTGTGTTTGCTGTGTGAGGCTGATCAGGACAGAATGTGTGTCGTTGCACTCCATTTcatgtgtcattttaaaaaatgcattcactctctctctctttttgtctttgtctgtctCCTTCATTCTGTTTCCTGTCCAGCAGTGTCTCTCTCAGTGGGCTGCTCGACCACCTGTTTCAGattcctctttctcttttatcgttcgctctctttttttcccccctatcCTTTCGCTGTCACCCCAAGAATCTTACGCCCTGTCCTCTTCCCCCTCTTTACGTAACCAGCATTTGAAGTGTGTGATTACTTGAATGTTATATAAATTTTCAGAacttgatttctgaaggtttcTGTAGTCATGCAATAATACAGCTactacttttttattcatttttttcggTACGACATCTCAGCCCTGAATTCCATAAATGTCATTAACTGTCAAAATGTGGTACTGTTTAAAACCTTAAACCTGTTCTAACAGTCTTTAGCTCTATTTGGATGGTACATTATACATGCTTATGTAACggaaatgtttgtatttttattatgggAGGAATTTCTGTGCCATGAGTGTTATTGAATGAAATCATATAAATGGAGGATGGAAAACTTAAATTTCCCATCTTGGTAGCTCCGCCTCCAAACCATTGTTTCTGTCCAGCTCAGTCATGCCACTGATTGCAATTGTTTAATGCAGCTAAGGTCCAAGTGCTAAAGTGAACAGTTTACCTTTAAGTGCACATGAATGAAACAGAtgcaaatgtcatttaaatttttttttttttttttttttttttgaggtcaCTGCTAATTTAAAAGATTGCTGTTTTGACACTTTTGATATATAAACCTAACTTGCTGCCAAGTTCATCAGTTTGATTTCAAAGGATGTATGCAAATATGTTACAGTCGTCATCCTGAGAAACGGTTACGAGTACAAACAGTGCTTTTGATTTCAGCTGAGATTAAATGCTGCAAGATTTTATCAGAATGTTCCATCTTTCTTCCTGCAAtgtttaaatgcagtaaaaacctttaatgactttattatggtattttattcaattttcaattatttttgtcaACTCTGTGCAATAATTGCTCTgtttagataaataaaaaaattataaaaaaaca

Function

symbol description
dnal4a Predicted to enable dynein intermediate chain binding activity and dynein light intermediate chain binding activity. Predicted to act upstream of or within microtubule-based process. Predicted to be located in cytoplasm and microtubule. Predicted to be part of dynein complex. Human ortholog(s) of this gene implicated in congenital mirror movement disorder. Orthologous to human DNAL4 (dynein axonemal light chain 4).
dnal4 Enables identical protein binding activity. Predicted to be involved in microtubule-based movement. Predicted to be located in plasma membrane. Predicted to be part of dynein complex. Implicated in congenital mirror movement disorder.

NR:

description
PREDICTED: dynein light chain 4, axonemal

GO:

id name namespace
GO:0007017 microtubule-based process biological_process
GO:0005875 microtubule associated complex cellular_component

KEGG:

id description
K10412 DNAL4; dynein light chain 4, axonemal

RNA

RNA id representative length rna type GC content exon number start site end site
TU33611 False 2953 lncRNA 0.37 4 23338414 23343588
XM_043235619.1 True 3040 mRNA 0.37 4 23338379 23343640

Neighbor

gene id symbol gene type direction distance location
LOC122341901 LOC107740603,LOC107662366,LOC107690737,LOC107602322,LOC107585068 coding upstream 1894 23326597 ~ 23336485 (+)
LOC122341903 LOC107740604,LOC107662367,LOC107585029,LOC107710048,LOC107602318,LOC107690738 coding upstream 18547 23310836 ~ 23319832 (+)
pvalb6 LOC107585030,LOC107662370,LOC107690741,LOC107602319,LOC107710050,LOC108258409,LOC108412390 coding upstream 37622 23262991 ~ 23300757 (+)
pdgfbb LOC107710051,LOC107582898,LOC107740670,LOC107656789,LOC107585031,LOC107662372 coding upstream 106079 23221703 ~ 23232300 (+)
tmem150b tmem150b,LOC107662375 coding upstream 141285 23193030 ~ 23197094 (+)
LOC122341358 LOC107585025,LOC107716530,LOC107662363 coding downstream 29020 23372660 ~ 23392187 (+)
LOC122341912 LOC107695123 coding downstream 54119 23397759 ~ 23400922 (+)
si:dkey-68o6.8 NA coding downstream 66979 23410619 ~ 23412806 (+)
sp100.4 LOC107748809,LOC107583267 coding downstream 71787 23415427 ~ 23420974 (+)
slc25a17 slc25a17,LOC107748783,LOC107672147,LOC107709637,LOC107695117,LOC107602302 coding downstream 94758 23438398 ~ 23444074 (+)
G22582 LOC107687786,LOC107710056,LOC107662412,LOC107740652,LOC107585075,LOC107582935,LOC105912825,LOC103364773 non-coding upstream 189761 23100944 ~ 23148618 (+)
G22584 NA non-coding upstream 221539 23114278 ~ 23116840 (+)
G22581 LOC107740652,LOC107662412,LOC107582935,LOC107687786,LOC107710056,LOC107578312,LOC107577241 non-coding upstream 242957 23089473 ~ 23095422 (+)
G22554 ddx5,LOC107695114 non-coding upstream 309874 22940247 ~ 23028505 (+)
G22340 atp5g1,LOC107740625,LOC107662391,LOC107582887,LOC107585044 non-coding upstream 665468 22511428 ~ 22672911 (+)
LOC122341922 LOC107695122,LOC107583308 non-coding downstream 52861 23396501 ~ 23400922 (+)
LOC122341920 LOC107672134,LOC107602299 non-coding downstream 69173 23412813 ~ 23414909 (+)
G22754 NA non-coding downstream 219400 23563040 ~ 23563246 (+)
G22757 NA non-coding downstream 231258 23574898 ~ 23578241 (+)
G22758 NA non-coding downstream 234836 23578476 ~ 23646166 (+)
prr15la prr15la,LOC107710040,LOC107585086,LOC107662431,LOC107582938,LOC108412372 other upstream 174663 23158219 ~ 23163716 (+)
LOC122341356 il2rb,LOC107695139,LOC107583317 other upstream 430244 22899333 ~ 22908135 (+)
hoxb2a hoxb2,hoxb2a,LOC107585087,LOC107662381,LOC107582889,LOC107687781 other upstream 567777 22765647 ~ 22770602 (+)
hoxb5a hoxb5a,LOC107717200,LOC107662384,LOC107687777,LOC108413114,LOC107740619 other upstream 612221 22722022 ~ 22726158 (+)
G22329 LOC107585049,LOC107740630,LOC107662396,LOC107582928,LOC107717208 other upstream 791171 22546158 ~ 22547208 (+)
LOC122341898 LOC107662363 other downstream 324 23343964 ~ 23361942 (+)
LOC122341907 NA other downstream 59801 23403441 ~ 23408814 (+)
zmp:0000000912 LOC107748810,LOC107695116,LOC107583322,LOC107695109,LOC107583307,LOC107709636,LOC107672113,LOC107602301 other downstream 80981 23424621 ~ 23431766 (+)
c1qtnf6a c1qtnf6,c1qtnf6a,mgat3a,LOC107695119,LOC107723613,LOC107672153,LOC107583300,LOC107748818,LOC107580620,LOC107695120 other downstream 365863 23709503 ~ 23721719 (+)
LOC122342055 pik3r6,LOC107719336,LOC107703883,LOC107563351,LOC107728708,LOC107583295 other downstream 696262 24039902 ~ 24051913 (+)

Expression


Co-expression Network