G22968


Basic Information

Item Value
gene id G22968
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056701.1
NCBI id CM032070.1
chromosome length 30200998
location 24133726 ~ 24516998 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU34101
cctaaaatataataataatattaataagaataatgataataatattagacACATACCAGAGTGATCAGTCACAAGGTTACACAGGAGTCTCCAGACTCTTACTAGTGGCCTCCACACGCATTCAAACACAGTACCTGcagtacactttattttaatatactttacaGTCAGGTGTCTGCAACTATTGCAAAGCAGAGCTTAAAGAAACTcgcacatatacagtatacacacatatatgcatatatcatatataaacatcatatatatatatatatatatatatatttcagtttaatatgTTAAACCAATGTTTATTATTGATCATTTCTCTCTCGCTGAAACCTACAGCCATTCTATCCGTGCAGCAACTGATGGAGAAGGGGGTCGTTTCGGTGCTGTTGGGCGTACTGttatatagaaataaacttTCTTGAGTCTCGTCTTGCCTctcaaaaacctttaaattatCTGGTTGTAATTTAGTGAAAGCATACGCATGATTCCTGACACTGAGCTAATGAACCTTAAGTTCTGTAAGTGGCGAATTCACAAAAACCCGGTGGTCCTAGAACCGAGCTCGAGAAACTCCGAAGAGTCCGACGACGCACAGCAGgttgtttgaattaaaaaaaaaaaaaaaggttctcaGCTCCAAAATAGTTTATCTATAGCCTGTATAAATACGTTACAGCGGGtagaaaacagaacagaaattaaaaaaaaaaaaaaagtgccatcGAGCCTGTATCACAAAAGAAACGGCAATTAAA

Function

GO:

id name namespace
GO:0004112 cyclic-nucleotide phosphodiesterase activity molecular_function
GO:0004114 3',5'-cyclic-nucleotide phosphodiesterase activity molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU34101 True 770 lncRNA 0.35 2 24133726 24516998

Neighbor

gene id symbol gene type direction distance location
tom1 LOC107672685,LOC107583252,LOC107719328,LOC107563358,LOC107703898 coding upstream 39116 24083986 ~ 24094610 (+)
zgc:171844 zgc:171844,LOC107672688,LOC107719339,LOC107583313,LOC107703875 coding upstream 61882 24058693 ~ 24071844 (+)
LOC122342045 mfsd6l,LOC107719337,LOC107583315,LOC107728393,LOC107563357,LOC107703882 coding upstream 77335 24051922 ~ 24056391 (+)
mchr1b mchr1b,LOC107719342,LOC107672125,LOC107672690,LOC107602308 coding upstream 256052 23873131 ~ 23877674 (+)
trnas-aga_1 NA coding upstream 297546 23836099 ~ 23836180 (+)
gcat gcat,LOC107703894,LOC107670921 coding downstream 4030 24521028 ~ 24524600 (+)
foxred2 foxred2,LOC107719334,LOC107559237,LOC107670923,LOC107703880 coding downstream 22325 24539323 ~ 24545214 (+)
ankrd54 ankrd54,LOC107670919,LOC107559232,LOC107563363,LOC107719341,LOC107728844,LOC107703879 coding downstream 28413 24545411 ~ 24549093 (+)
hmgxb4a LOC107658693,LOC107758107,LOC107728447,LOC107703878,LOC107563362 coding downstream 32229 24549227 ~ 24557112 (+)
si:dkeyp-69e1.8 LOC107758106,LOC107658694,LOC107703890,LOC107728849,LOC107563364,LOC107559220 coding downstream 41748 24558746 ~ 24562589 (+)
LOC122342068 NA non-coding upstream 9847 24122208 ~ 24123879 (+)
G22963 NA non-coding upstream 13448 24116920 ~ 24120278 (+)
LOC122342058 NA non-coding upstream 25974 24100850 ~ 24107752 (+)
G22957 NA non-coding upstream 39131 24081566 ~ 24094595 (+)
LOC122342062 NA non-coding upstream 50242 24081517 ~ 24083484 (+)
G23002 NA non-coding downstream 40713 24557711 ~ 24558261 (+)
G23005 NA non-coding downstream 45814 24562812 ~ 24563127 (+)
G23004 NA non-coding downstream 46248 24563246 ~ 24563895 (+)
G23011 NA non-coding downstream 95528 24612526 ~ 24612751 (+)
G23014 ldlra,ldlr,LOC107758126,LOC107658701 non-coding downstream 98169 24615167 ~ 24673712 (+)
G22958 NA other upstream 36567 24095024 ~ 24097159 (+)
LOC122342055 pik3r6,LOC107719336,LOC107703883,LOC107563351,LOC107728708,LOC107583295 other upstream 81813 24039902 ~ 24051913 (+)
c1qtnf6a c1qtnf6,c1qtnf6a,mgat3a,LOC107695119,LOC107723613,LOC107672153,LOC107583300,LOC107748818,LOC107580620,LOC107695120 other upstream 412007 23709503 ~ 23721719 (+)
zmp:0000000912 LOC107748810,LOC107695116,LOC107583322,LOC107695109,LOC107583307,LOC107709636,LOC107672113,LOC107602301 other upstream 701960 23424621 ~ 23431766 (+)
LOC122341907 NA other upstream 724912 23403441 ~ 23408814 (+)
mcm5 mcm5,LOC107703892,LOC107670920,LOC107719335 other downstream 8282 24525280 ~ 24530769 (+)
G23026 LOC107559242,LOC107758098,LOC107658707,LOC107728516,LOC107695967,LOC107568243 other downstream 204528 24721526 ~ 24811577 (+)
LOC122342019 LOC107758123 other downstream 466283 24983281 ~ 24993218 (+)
arhgap17b arhgap17b,LOC107559249,LOC107758115,LOC107670674,LOC107689995,LOC107728593 other downstream 829786 25346784 ~ 25374498 (+)
G23061 rps2,LOC107758112,LOC107690003,LOC107555664 other downstream 894920 25411918 ~ 25447270 (+)

Expression


Co-expression Network