G23027


Basic Information

Item Value
gene id G23027
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056701.1
NCBI id CM032070.1
chromosome length 30200998
location 24730359 ~ 25090434 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU34190
CTCTCCAGCCACCGTGAGTATAAACGAAGGCGAGGACAATAGCGTGCCGTCGGCAGACAAAAAGGTATGACGACAGCAGGGGCGGGGCTTAATCGTCACTCATCGCCACTCACAGATTCCCCCCCTATCCCCGCCACCCAAATAAATTTAAACGCATGGTGATCTCATCGCTCCGTTCCACCTGCCAGAGAGCACAGTGATACTTCCAAGTccaaatttatttcattttcagttttattccatgaagaatgttttttttatcaggaaCAGCATGCCATTACTATGACGACAGCTGACATGCAGCTTGTCGGCGGTGCTTGCTGAGGCTTTCACTGTGCTGTCGTATTCATCGCTGAAAACATTCAAATTCAGTCATAACCATGTTCATAATAACCGTGAGAGACAGATGGCCTTGTGTTCGACATGTTCCTATACGTGGCGGCCTTCCAGTTTTGCTGCACGCTCTGTTACAAAATTCTTTTAGTTAAGAATTGaggtattttattgatttatcgTCTCATTGCATACTCGTCTTGTATGCCACGGCACGCAGAAACAGTTGTCGACAGGCATACAGAGCTGTGTACAAGTGCTCGCTCCTCTCtggttttctgtatttttgcatgTCAATGAATGTCGTCAGATTTATAACCAAAACGTGAGGATGCTGTCAAATGGTTAatcctgttttttgtttaaataatatatgagtgtatatatttgttatgcaGTGGTGTAACTACAGACAGTGCAGGCAGTGCAAagttattactatattattatacgtatagaagtattaataatacaatataattcatCAGTCATTCAGTCAAGCATTTCTGAGGCTGAGGGTTCTAATCCACCCTTgtatggtttattattattattatttattatttacacatatatattaaatatatttatatataatataatgaaatgtatatattttcagaatatatactgtatgtgtgtatttatatatacgtaataaacagcacacacatttaaacaaaaaactatatttcGGATATGaataattgcgattaatcgtttgacagcactagttatgttatgttgttttttttaaatacaagaaATTAATTGGTCGTTAGAACCGAATAATTCTGttcaaaacatttgttacaaaagatttcggtttcaaataaaactattttcagttcattgaaaaatgatcaaagttgaaaaatattcaaacagaaaatatttattttagtgtattaatgtatttacaattaaataaatgtagccttactgaacataagagacttctttcaaacacatgaaaaaaatcCGGCCCCCAAAACAGTTAACTGtatgtgatataaaaaaaaaataaaaccaaaaaaaaaccccagttTGCTGTAACGTCTACTGAACAGTTTTGCTTTTGATTCGTCTTTTTTCCGCATTACTTCACACTCAAATTACTCCTACAACTCAAACCTTGAAAGACCAGAAACTTTGTTCCTCTTTTTCAACCAGACTATATGCCAACACGATCtacatacaacaaaaataataccaaATGTGCACAAACTCAGAAATTCAGACAAAAGACCTGTTCACAGCACTGTATGCTTTCATGAAGCTGTCAGAATAACAATATTCATATGAAAAGACATGAAATAATGCCAT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU34190 True 1659 lncRNA 0.35 2 24730359 25090434

Neighbor

gene id symbol gene type direction distance location
s1pr5a s1pr5a,LOC107758128,LOC107577264,LOC107658699,LOC107728470 coding upstream 112118 24614599 ~ 24618241 (+)
si:dkeyp-69e1.8 LOC107758106,LOC107658694,LOC107703890,LOC107728849,LOC107563364,LOC107559220 coding upstream 167770 24558746 ~ 24562589 (+)
hmgxb4a LOC107658693,LOC107758107,LOC107728447,LOC107703878,LOC107563362 coding upstream 173247 24549227 ~ 24557112 (+)
ankrd54 ankrd54,LOC107670919,LOC107559232,LOC107563363,LOC107719341,LOC107728844,LOC107703879 coding upstream 181266 24545411 ~ 24549093 (+)
foxred2 foxred2,LOC107719334,LOC107559237,LOC107670923,LOC107703880 coding upstream 185145 24539323 ~ 24545214 (+)
grin2ca grin2c,LOC107658706,LOC107758122,LOC107559244,LOC100329743,LOC107728554 coding downstream 15747 25106181 ~ 25162861 (+)
gaa gaa,LOC107559225 coding downstream 187358 25277792 ~ 25286925 (+)
tbc1d16 tbc1d16,LOC107559246,LOC107689993,LOC107670685,LOC107562324 coding downstream 197320 25287754 ~ 25308434 (+)
cbx4 cbx4,LOC107758118,LOC107559247,LOC107690020,LOC107670662,LOC107728779,LOC107562304 coding downstream 237286 25327720 ~ 25333865 (+)
cbx8a LOC107758117,LOC107578989,LOC107728583,LOC107689994,LOC107559248,LOC107670683 coding downstream 245751 25336185 ~ 25339891 (+)
G23014 ldlra,ldlr,LOC107758126,LOC107658701 non-coding upstream 56647 24615167 ~ 24673712 (+)
G23013 LOC107658701,LOC107758126 non-coding upstream 79655 24640580 ~ 24650704 (+)
G23011 NA non-coding upstream 117608 24612526 ~ 24612751 (+)
G23004 NA non-coding upstream 166464 24563246 ~ 24563895 (+)
G23005 NA non-coding upstream 167232 24562812 ~ 24563127 (+)
G23077 NA non-coding downstream 288794 25379228 ~ 25382913 (+)
G23078 grid2ipa,LOC107559228,LOC107758114,LOC107689997,LOC107728614,LOC107670677,LOC107583579 non-coding downstream 302084 25392518 ~ 25394254 (+)
G23095 NA non-coding downstream 328236 25418670 ~ 25419775 (+)
G23096 NA non-coding downstream 329838 25420272 ~ 25421130 (+)
G23069 NA non-coding downstream 340040 25430474 ~ 25434548 (+)
mcm5 mcm5,LOC107703892,LOC107670920,LOC107719335 other upstream 199590 24525280 ~ 24530769 (+)
G22953 mfsd6l,LOC107719337,LOC107583315,LOC107563357,LOC107728393,LOC107703882 other upstream 281070 24446878 ~ 24449289 (+)
G22996 LOC107703883,LOC107563351,LOC107719336,LOC107583295 other upstream 290896 24434055 ~ 24439463 (+)
G22958 NA other upstream 633200 24095024 ~ 24097159 (+)
LOC122342055 pik3r6,LOC107719336,LOC107703883,LOC107563351,LOC107728708,LOC107583295 other upstream 678446 24039902 ~ 24051913 (+)
arhgap17b arhgap17b,LOC107559249,LOC107758115,LOC107670674,LOC107689995,LOC107728593 other downstream 256350 25346784 ~ 25374498 (+)
G23061 rps2,LOC107758112,LOC107690003,LOC107555664 other downstream 321484 25411918 ~ 25447270 (+)
tob1a tob1a,LOC107690006,LOC107758110,LOC107555665,LOC107583660,LOC107728672,LOC107670673 other downstream 433875 25524309 ~ 25569403 (+)
LOC122331665 rsad1,LOC107690008,LOC107755174 other downstream 483323 25573757 ~ 25577043 (+)
LOC122336634 NA other downstream 522725 25613159 ~ 25615905 (+)

Expression


Co-expression Network