LOC122336634


Basic Information

Item Value
gene id LOC122336634
gene name NA
gene type misc
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056701.1
NCBI id CM032070.1
chromosome length 30200998
location 25613159 ~ 25615905 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU34385
TCTGCTCATCTTCACACATCGACACCAAATCACAAGATGATCACAATCCTGTGTGCTTTCTTCACTCTTCTGAGCTGTGTCAGTGGAGTGACTGGAGTGACTCAGAGTCCATTAATCTCAGTCAATGAAGGACAAACAGCTCAACTGGACTGTAATCTGGGGACAGTAACTGATGCTTCTGCTCAATGATTATTTTGCAAATGGAAAGCTCATctgcaaataaacaataataacgGATGAATGACATCATCTGGTCAAAAAGATGACAAACCAGCAGTTTATCTTGTAACTCCAAGCTTGCTGGAAAAACACGAAACCTGCTTGATTATGATGATATTTCTTACCCTCCTGACACTTAATCGGCGTACGAGCAGCACTGAAGGGAGTCTGAGTTCAGTGTCTTGTGTCTCTGAAACCTCGGGAGGTTTTTGTACAGTGAAGATGTGAAATGCATCTCTGTGGTATTCGGCCAAGGAACAAAACTCAATGTGATCGACTCCCCTCTGTCTCGTCCTGTTCTGACTCTCTTGTCTCCGTCCGCTGAGGCTCTGAAGGAGAGTAAAGTCACTCTGGTGTGTCTGGCCGAGGATGTCTCGGTGCCTCTGGTGCACGTTACCTGGTCGGTCAACGGCCGCTCCGTTACAGACGGTGTCTGGAACAGCCCTACCGAGAAACAACCGGACAAACGCTTCAAAATGAGCAGCTCTCTGAGCGTGGAGTCGTCCGTGTGGACGAACGACGCAGATTTCTCGTGTGAAGTGTCAGTGGGCTCCGAGTCCGCTAAGAAAAGCATCTCGGTTTCCCGCTGCGGAACGACGGCCTGAAggaaaatctttatttttttttgttcgtgtTGTGTGAATTGCGTGACTTCGGTACTTTATATAGCACTGTGTACTTACGTTTTTGGTTTTGGCACTTGCAATTAAAAATCAAGGCATGGCATTTGTTCTCGTTTTCTTTCGCGCGGCACACCGCGTATTTTTAGCTTTATGTAAATCATGATGGTCCCCTGAGCTCAGAACACACAAACGTAAAAAAATCCCCAGCTGCACAGATGGTacatcatgtatatatattaatatactcaCAACCCCCGAGTTTCATATTAGAGAAATGTGATGTCCAATCAACGCGGTATGTTTAATCACACTTCCCTTTGCACTATTGTCTAATATTATACAGTTCGGACCATTAACACAATAAACTAAGTGGGAATagt
>XM_043233719.1
GGTCTTTCTCTCTACCGTCttaaagtctctctctctctggtctgaTCTCAGCATTATTCTTCAGCTCTGCTCATCTTCACACATCGACACCAAATCACAAGATGATCACAATCCTGTGTGCTTTCTTCACTCTTCTGAGCTGTGTCAGTGGAGTGACTGGAGTGACTCAGAGTCCATTAATCTCAGTCAATGAAGGACAAACAGCTCAACTGGACTGTAATCTGGGGACAGTAACTGATGCTTCTGCTCAATGGTACAAACAGACTCCAGGAGGAGCTCCTCAATATGTGTTAAGATTTTATCATGGCTGGGGCTCACCTTCATATGGATCTGGTTTCTCTGCTCCTAAATTCACATCAACACATTCATCTCAATCAGATTATCGTCTGATCATCAGTAATGTGGATGTGTCTGATTCTGCGGTGTATTACTGTCAGACATGGGACAGCTCTGTTAGTGAGAACGTATTCGGCCAAGGAACAAAACTCAATGTGATCGACTCCCCTCTGTCTCGTCCTGTTCTGACTCTCTTGTCTCCGTCCGCTGAGGCTCTGAAGGAGAGTAAAGTCACTCTGGTGTGTCTGGCCGAGGATGTCTCGGTGCCTCTGGTGCACGTTACCTGGTCGGTCAACGGCCGCTCCGTTACAGACGGTGTCTGGAACAGCCCTACCGAGAAACAACCGGACAAACGCTTCAAAATGAGCAGCTCTCTGAGCGTGGAGTCGTCCGTGTGGACGAACGACGCAGATTTCTCGTGTGAAGTGTCAGTGGGCTCCGAGTCCGCTAAGAAAAGCATCTCGGTTTCCCGCTGCGGAACGACGGCCTGAAggaaaatctttatttttttttgttcgtgtTGTGTGAATTGCGTGACTTCGGTACTTTATATAGCACTGTGTACTTACGTTTTTGGTTTTGGCACTTGCAATTAAAAATCAAGGCATGGCA
>XR_006249347.1
GTGTGCTTTCTTCACTCTTCTGAGCTGTGTCAGTGGAGTGACTGGAGTGACTCAGAGTCCATTAATCTCAGTCAATGAAGGACAAACAGCTCAACTGGACTGTAATCTGGGGACAGTAACTGATGCTTCTGCTCAATGATTATTTTGCAAATGGAAAGCTCATctgcaaataaacaataataacgGATGAATGACATCATCTGGTCAAAAAGATGACAAACCAGCAGTTTATCTTGTAACTCCAAGCTTGCTGGAAAAACACGAAACCTGCTTGATTATGATGATATTTCTTACCCTCCTGACACTTAATCGGCGTACGAGCAGCACTGAAGGGAGTCTGAGTTCAGTGTCTTGTGTCTCTGAAACCTCGGGAGGTTTTTGTACAGTGAAGATGTGAAATGCATCTCTGTGGTATTCGGCCAAGGAACAAAACTCAATGTGATCGACTCCCCTCTGTCTCGTCCTGTTCTGACTCTCTTGTCTCCGTCCGCTGAGGCTCTGAAGGAGAGTAAAGTCACTCTGGTGTGTCTGGCCGAGGATGTCTCGGTGCCTCTGGTGCA
>XR_006249348.1
CACACATCGACACCAAATCACAAGATGATCACAATCCTGTGTGCTTTCTTCACTCTTCTGAGCTATTATTTTGCAAATGGAAAGCTCATctgcaaataaacaataataacgGATGAATGACATCATCTGGTCAAAAAGATGACAAACCAGCAGTTTATCTTGTAACTCCAAGCTTGCTGGAAAAACACGAAACCTGCTTGATTATGATGATATTTCTTACCCTCCTGACACTTAATCGGCGTACGAGCAGCACTGAAGGGAGTCTGAGTTCAGTGTCTTGTGTCTCTGAAACCTCGGGAGGTTTTTGTACAGTGAAGATGTGAAATGCATCTCTGTGGTATTCGGCCAAGGAACAAAACTCAATGTGATCGACTCCCCTCTGTCTCGTCCTGTTCTGACTCTCTTGTCTCCGTCCGCTGAGGCTCTGAAGGAGAGTAAAGTCACTCTGGTGTGTCTGGCCGAGGATGTCTCGGTGCCTCTGGTGCA

Function

GO:

id name namespace
GO:0007049 cell cycle biological_process
GO:0000278 mitotic cell cycle biological_process

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU34385 True 1222 lncRNA 0.45 4 25613224 25615905
XM_043233719.1 False 948 mRNA 0.47 4 25613159 25615628
XR_006249347.1 False 560 transcript 0.46 4 25613274 25615293
XR_006249348.1 False 486 transcript 0.45 3 25613236 25615293

Neighbor

gene id symbol gene type direction distance location
LOC122336618 LOC107690031 coding upstream 1468 25609480 ~ 25611691 (+)
LOC122336725 LOC107555667,LOC107755177,LOC107583709,LOC107690013,LOC107751312,LOC107670672 coding upstream 8650 25586523 ~ 25604509 (+)
spag9a spag9a,LOC107690005,LOC107583630,LOC107670658,LOC107728806 coding upstream 128715 25455160 ~ 25484444 (+)
kdelr2a kdelr2a,kdelr2,LOC107670681,LOC107728665,LOC107555655,LOC108432184,LOC102784720,LOC102215457 coding upstream 158754 25450395 ~ 25454405 (+)
ndufb10 LOC107555654,LOC107583619,LOC107758101 coding upstream 168613 25442610 ~ 25444546 (+)
LOC122336676 rcvrna,LOC107690016,LOC107555668,LOC107755173,LOC107583783,LOC107725264 coding downstream 12994 25628899 ~ 25630633 (+)
LOC122336602 LOC107690031 coding downstream 80966 25696871 ~ 25699105 (+)
LOC122341888 NA coding downstream 88750 25704655 ~ 25706218 (+)
LOC122341380 NA coding downstream 90746 25706651 ~ 25707147 (+)
LOC122341871 rcvrna,LOC107690016,LOC107555668,LOC107755173,LOC107583783,LOC107725264 coding downstream 104942 25720847 ~ 25722746 (+)
G23106 NA non-coding upstream 93411 25514214 ~ 25519748 (+)
G23069 NA non-coding upstream 178611 25430474 ~ 25434548 (+)
G23096 NA non-coding upstream 192029 25420272 ~ 25421130 (+)
G23095 NA non-coding upstream 193384 25418670 ~ 25419775 (+)
G23078 grid2ipa,LOC107559228,LOC107758114,LOC107689997,LOC107728614,LOC107670677,LOC107583579 non-coding upstream 218905 25392518 ~ 25394254 (+)
G23125 NA non-coding downstream 15234 25631139 ~ 25767050 (+)
G23127 NA non-coding downstream 18719 25634624 ~ 25727704 (+)
G23126 NA non-coding downstream 31281 25647186 ~ 25725255 (+)
G23135 NA non-coding downstream 78581 25694486 ~ 25694868 (+)
G23139 NA non-coding downstream 153476 25769381 ~ 25775147 (+)
LOC122331665 rsad1,LOC107690008,LOC107755174 other upstream 36116 25573757 ~ 25577043 (+)
tob1a tob1a,LOC107690006,LOC107758110,LOC107555665,LOC107583660,LOC107728672,LOC107670673 other upstream 43756 25524309 ~ 25569403 (+)
G23061 rps2,LOC107758112,LOC107690003,LOC107555664 other upstream 165889 25411918 ~ 25447270 (+)
arhgap17b arhgap17b,LOC107559249,LOC107758115,LOC107670674,LOC107689995,LOC107728593 other upstream 238661 25346784 ~ 25374498 (+)
LOC122342019 LOC107758123 other upstream 619941 24983281 ~ 24993218 (+)
G23121 rsad1,LOC107755174,LOC107690008,LOC107670671 other downstream 45143 25661048 ~ 25662317 (+)
LOC122341783 arl16,LOC107583744 other downstream 216600 25832505 ~ 25834198 (+)
G23146 NA other downstream 221238 25837143 ~ 25850576 (+)
LOC122341383 tom1l2 other downstream 278685 25894590 ~ 25911625 (+)
LOC122341778 gid4,LOC107724729,LOC107555661,LOC107713949,LOC107559524,LOC106601817,LOC101065567 other downstream 332149 25948054 ~ 25952747 (+)

Expression


Co-expression Network