G23712 (LOC107558876)


Basic Information

Item Value
gene id G23712
gene name LOC107558876
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056701.1
NCBI id CM032070.1
chromosome length 30200998
location 27029868 ~ 27044382 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU35360
CCGACAGCGTAACTATTTCTATAAACCCAACCGCTTGTTTCAAACAAAGTAAAGGCCTGCCAGCTAATCTCCCAAAGAGTTATAATGAGGACCACATATGAACGAGCAAGATGCGAGCCGACCCAACaacaagggggaaaaaaggccCGAGCGTACTAGAACAGCCTGGAGTTCGTCGCGCGCACAAAAAAGGGGCAGACTCTTCATAAAAATCACAAGGACGCAGACCGTGCGAGGATGTGAGCTGGACGTCGTCGAAAACAAAGAAAGCTCAGGCTGAATGAAAGGGATCAGCCGCCTCCAAAATGGCGTCGACGGCCGCAGGATAGGAGATCCACAAGCCGCTCCGCTCCGGACGCGCCGCTTCACGACGCGCGATGCTTGAAGCTCACACGGGTGGCAAGACAAAGGGCTTAGGGAGAGAACACATTATGCACAATATATATCTAACGAGCTACACTCCCAGAGAAGCTCCAGGGGCCAGCTGGCCGCCATGTTTGCTGGCAGCCTAGAAAGATAAAAACGGGGCTTCACCCAGGCGTGTGGATGCGCCCGTGATTTTCTCCGCTTTCTCCTACCCTGCTGTACGGCGTGGGTCTGCTTCTTCCGCGGCTCAGGTTCTGGCGGGTCCTCATGGGGCCGGATCCGCCGCCGCGGCCTCCAAAGCCTCCGCCTGTGTTACCGAGGCGTCCCCCGGCGCCAGCACCACGGCCTCCTCCTGCGGCTCCTCGGCCCCCGCGGCCTCCTCtcccgccgccgccgccgcgcCCGCCACCGCCGCGCTGCCGGTTTTGCTTGATGATGTCGTCTAAGGACATATCCATCTTGTCTGCCATCGTTTGGCCTTTGTTAACGCTAAACACTGCCGTTAACTAAAAACAAACCCCGCTCGAGTGATGCACTACACTGCCCGTGCGCTACCGCTCAC

Function

NR:

description
PREDICTED: interferon-induced very large GTPase 1-like isoform X2

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU35360 True 928 lncRNA 0.58 2 27029868 27044382

Neighbor

gene id symbol gene type direction distance location
cdr2l cdr2l,LOC107743016,LOC107665638,LOC107748864 coding upstream 9975 27007494 ~ 27019893 (+)
recql5 recql5 coding upstream 22065 26990895 ~ 27007803 (+)
LOC122341528 si:ch211-120g10.1,si:ch73-364h19.2,LOC107665693,LOC107548722,LOC107558873,LOC107748865,LOC107654584,LOC108435881,LOC107743034 coding upstream 39837 26983161 ~ 26990031 (+)
si:ch73-364h19.1 si:ch73-364h19.1,LOC107665706,LOC107743014,LOC107654587,LOC107558872 coding upstream 47971 26972744 ~ 26981897 (+)
LOC122339380 LOC107743011,LOC107748868,LOC107654588 coding upstream 123831 26860048 ~ 26906037 (+)
nptx1l nptx1l,LOC107569544,LOC107665615,LOC107684232,LOC104929529 coding downstream 134696 27179078 ~ 27184592 (+)
LOC122334820 mgat5b,LOC107743022,LOC107562046,LOC108435872,LOC108274344,LOC107731677 coding downstream 263258 27307640 ~ 27386062 (+)
LOC122335316 NA coding downstream 391430 27435812 ~ 27438843 (+)
rasd4 zgc:153845,LOC103035404,LOC108435855,LOC103354899 coding downstream 414409 27458791 ~ 27460139 (+)
LOC122334777 NA coding downstream 430943 27475325 ~ 27488357 (+)
G23714 LOC107665665,LOC106606967 non-coding upstream 7134 27012599 ~ 27022734 (+)
G23709 NA non-coding upstream 83871 26944207 ~ 26945997 (+)
G23694 NA non-coding upstream 187210 26842189 ~ 26842658 (+)
G23693 NA non-coding upstream 188740 26840773 ~ 26841128 (+)
LOC122341893 NA non-coding upstream 195199 26829886 ~ 26834669 (+)
G23733 mcrip1,fam195b,LOC107654575 non-coding downstream 2556 27046938 ~ 27047525 (+)
G23713 NA non-coding downstream 5306 27049688 ~ 27053794 (+)
G23840 NA non-coding downstream 205043 27249425 ~ 27252114 (+)
G23869 NA non-coding downstream 418617 27462999 ~ 27463302 (+)
LOC122335648 NA non-coding downstream 428472 27472854 ~ 27475070 (+)
G23695 NA other upstream 182511 26846723 ~ 26847357 (+)
srsf2b srsf2b,srsf2,LOC104923358,LOC107755521,LOC108430244 other upstream 228467 26798431 ~ 26801401 (+)
ubald2 ubald2,LOC107548684 other upstream 256965 26759063 ~ 26772903 (+)
pitpnc1a pitpnc1,LOC107665814,LOC107691236,LOC107752702,LOC107743029,LOC108412868,LOC108274028,LOC107376579,LOC106903613 other upstream 324137 26650829 ~ 26705731 (+)
LOC122341778 gid4,LOC107724729,LOC107555661,LOC107713949,LOC107559524,LOC106601817,LOC101065567 other upstream 1077121 25948054 ~ 25952747 (+)
LOC122335546 NA other downstream 237445 27281827 ~ 27282406 (+)
G24115 si:ch73-374l24.1,LOC107729205,LOC107556610,LOC107698783 other downstream 1471261 28515643 ~ 28560324 (+)
LOC122334878 si:ch73-374l24.1,LOC107556610,LOC107698783,LOC107664393,LOC108437159 other downstream 1548422 28592804 ~ 28650650 (+)
LOC122341395 LOC107710694,LOC107556592,LOC107698764,LOC107729203 other downstream 1662649 28707031 ~ 28708608 (+)
LOC122341400 NA other downstream 1753932 28798314 ~ 28808828 (+)

Expression


Co-expression Network