G24139


Basic Information

Item Value
gene id G24139
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056701.1
NCBI id CM032070.1
chromosome length 30200998
location 28709906 ~ 28716193 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU36023
gtgtgtgtttggttatcTGTTTGGAGTGgggatatttttagtttttattttctcattgtgGGTGGGGttcatttatattgaattttgGTTTTGGGGGTTTTGCTTTTCCTCCCGATTGTTGGGTCGTCGAGAGATATCAATGTTGTATATGATTGGTGGTCACTGTATaactattttatgaaaacaattgtattaaattggtgatgtgatgtgttttgtatgattttacctgtctttatatttaaagtgtccatttaaataaattgattgcacACCTCTGTTTATTCCTTCATTTGACTGAAGGAGACCTGGAGTTGTAGAGAAATCTCTCTGTGTACCCCGTGAATTGTGGGTGGTTCTAGCCCCTGTCACATttggcgtagtcggcagggtgtTGTAGACAGAGGTGTGTGCACTTAGATTTCTGGACATTTTGTTTGTTGGAAGTAGTTTCTTTTGTTTGAGTTTTGTTTGTGGTGTTATTTGAGTGTTTtgtgtgagttttttttcagcagcaaaGCAGCAGCGGGCAGGGATTAAGGGAAGCTTTCCCGGGATTTGCAGTTTTTCAGGTCGCCATTCAAGCTGGGTAGGAGTGGTGGATTATTCACTATCC

Function

GO:

id name namespace
GO:0009063 cellular amino acid catabolic process biological_process
GO:0009078 pyruvate family amino acid metabolic process biological_process
GO:0009080 pyruvate family amino acid catabolic process biological_process
GO:1901605 alpha-amino acid metabolic process biological_process
GO:1901606 alpha-amino acid catabolic process biological_process
GO:0046395 carboxylic acid catabolic process biological_process
GO:0042851 L-alanine metabolic process biological_process
GO:0042853 L-alanine catabolic process biological_process
GO:0044282 small molecule catabolic process biological_process
GO:0006522 alanine metabolic process biological_process
GO:0006524 alanine catabolic process biological_process
GO:0016054 organic acid catabolic process biological_process
GO:0030545 receptor regulator activity molecular_function
GO:0048018 receptor ligand activity molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU36023 True 616 lncRNA 0.39 2 28709906 28716193

Neighbor

gene id symbol gene type direction distance location
cacng5b cacng5b,cacng5,LOC107698772,LOC107556612,LOC107729207,LOC107664435,LOC108437158 coding upstream 51417 28653093 ~ 28658489 (+)
LOC122341391 LOC107758342 coding upstream 390197 28316600 ~ 28319709 (+)
LOC122334736 LOC107702828 coding upstream 641807 28036420 ~ 28068099 (+)
LOC122335462 LOC107572669,LOC107732158,LOC107573385,LOC107726801,LOC107562032,LOC107743023,LOC107676321,LOC107710688 coding upstream 757449 27951751 ~ 27952457 (+)
LOC122335347 LOC107569407,LOC107688685,LOC107571108 coding upstream 980014 27728274 ~ 27729892 (+)
LOC122341397 LOC107556593 coding downstream 4354 28720547 ~ 28721944 (+)
LOC122335069 amn,LOC107556594,LOC107710691,LOC107698770,LOC107729201 coding downstream 19806 28735999 ~ 28737619 (+)
LOC122335596 rac1,RAC1,rac1a,LOC105898786,LOC108437155,LOC108412270,LOC107569188 coding downstream 69339 28785532 ~ 28789067 (+)
LOC122335014 LOC107698764,LOC107710694,LOC107556592,LOC107729203 coding downstream 76859 28793052 ~ 28797759 (+)
amn amn,LOC107556594,LOC107710691,LOC107698770,LOC107729201 coding downstream 100385 28816578 ~ 28818102 (+)
G24132 NA non-coding upstream 4762 28704030 ~ 28705144 (+)
LOC122335662 NA non-coding upstream 315368 28393741 ~ 28394538 (+)
G23964 NA non-coding upstream 380495 28328465 ~ 28329411 (+)
LOC122335640 NA non-coding upstream 389750 28319710 ~ 28320156 (+)
G23953 NA non-coding upstream 474370 28227075 ~ 28235536 (+)
LOC122335688 NA non-coding downstream 1839 28718032 ~ 28719109 (+)
G24146 NA non-coding downstream 41502 28757695 ~ 28831744 (+)
G24169 NA non-coding downstream 138770 28854963 ~ 28855171 (+)
G24170 NA non-coding downstream 142692 28858885 ~ 28859136 (+)
G24172 NA non-coding downstream 146080 28862273 ~ 28862502 (+)
LOC122341395 LOC107710694,LOC107556592,LOC107698764,LOC107729203 other upstream 1298 28707031 ~ 28708608 (+)
LOC122334878 si:ch73-374l24.1,LOC107556610,LOC107698783,LOC107664393,LOC108437159 other upstream 59256 28592804 ~ 28650650 (+)
G24115 si:ch73-374l24.1,LOC107729205,LOC107556610,LOC107698783 other upstream 149582 28515643 ~ 28560324 (+)
LOC122335546 NA other upstream 1427500 27281827 ~ 27282406 (+)
G23695 NA other upstream 1862549 26846723 ~ 26847357 (+)
LOC122341400 NA other downstream 82121 28798314 ~ 28808828 (+)
LOC122335482 LOC107568598,LOC107698767,LOC107729206,LOC107664371,LOC107710703 other downstream 127621 28843814 ~ 28846375 (+)
LOC122334478 LOC107698777,LOC107556618,LOC107664385,LOC107568597,LOC797750,LOC107729209 other downstream 152886 28869079 ~ 28933084 (+)
LOC122341401 NA other downstream 332085 29048278 ~ 29054414 (+)
LOC122335397 LOC107698766,LOC107717477,LOC107552107,LOC107671248,LOC107740236,LOC107556596 other downstream 344582 29060775 ~ 29073755 (+)

Expression


Co-expression Network