G24170


Basic Information

Item Value
gene id G24170
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056701.1
NCBI id CM032070.1
chromosome length 30200998
location 28858885 ~ 28859136 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU36061
CACAACTCAAAAAGAGCCCGAAGACCGAAAAGAGAGATTCCTCAATCTTTTTAGAAAAGATCTaaactgaatgtttttattggtcattatttagtcattaGGCACAGATGTGCTGTGTAGGGTATAAAGCTTAATTACCTTTGACGTAAGAGGCAGTGTCAGTCAATGGTAGTTTTCACTTTCAACCACCAGAGGTAGATCAGCACACTTGTACTTTCACACACAAATTCGGAGCATGCGATTTCGTTTTTA

Function

GO:

id name namespace
GO:0008137 NADH dehydrogenase (ubiquinone) activity molecular_function
GO:0003954 NADH dehydrogenase activity molecular_function
GO:0050136 NADH dehydrogenase (quinone) activity molecular_function
GO:0016651 oxidoreductase activity, acting on NAD(P)H molecular_function
GO:0016655 oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor molecular_function

KEGG:

id description
ko00190 Oxidative phosphorylation
ko04714 Thermogenesis
ko05010 Alzheimer disease
ko05012 Parkinson disease
ko05016 Huntington disease
ko04932 Non-alcoholic fatty liver disease

RNA

RNA id representative length rna type GC content exon number start site end site
TU36061 True 252 lncRNA 0.38 1 28858885 28859136

Neighbor

gene id symbol gene type direction distance location
otop2 otop2,LOC107710699,LOC107698768,LOC107556602,LOC107729200,LOC107664425 coding upstream 28149 28826613 ~ 28830736 (+)
amn amn,LOC107556594,LOC107710691,LOC107698770,LOC107729201 coding upstream 40783 28816578 ~ 28818102 (+)
LOC122335014 LOC107698764,LOC107710694,LOC107556592,LOC107729203 coding upstream 61126 28793052 ~ 28797759 (+)
LOC122335596 rac1,RAC1,rac1a,LOC105898786,LOC108437155,LOC108412270,LOC107569188 coding upstream 69818 28785532 ~ 28789067 (+)
LOC122335069 amn,LOC107556594,LOC107710691,LOC107698770,LOC107729201 coding upstream 121266 28735999 ~ 28737619 (+)
fscn2a fscn2a,LOC107710702,LOC107556620,LOC107729215,LOC107568593 coding downstream 98521 28957657 ~ 28962542 (+)
LOC122334787 NA coding downstream 355991 29215127 ~ 29225079 (+)
LOC122335520 LOC107675901,LOC107732152 coding downstream 365856 29224992 ~ 29228086 (+)
notum1a notum,notum1a,LOC107732149,LOC107671240,LOC108438914 coding downstream 415517 29274653 ~ 29283738 (+)
LOC122335289 myadml2,LOC107671249,LOC107675441,LOC107717480,LOC107571305,LOC107552108,LOC107732151 coding downstream 425556 29284692 ~ 29287182 (+)
G24169 NA non-coding upstream 3714 28854963 ~ 28855171 (+)
G24146 NA non-coding upstream 27141 28757695 ~ 28831744 (+)
LOC122335688 NA non-coding upstream 139776 28718032 ~ 28719109 (+)
G24139 NA non-coding upstream 142692 28709906 ~ 28716193 (+)
G24138 NA non-coding upstream 143020 28708780 ~ 28715865 (+)
G24172 NA non-coding downstream 3137 28862273 ~ 28862502 (+)
G24174 NA non-coding downstream 5508 28864644 ~ 28864859 (+)
G24175 NA non-coding downstream 8480 28867616 ~ 28868036 (+)
G24176 NA non-coding downstream 9658 28868794 ~ 28869074 (+)
G24267 NA non-coding downstream 109379 28968515 ~ 29014908 (+)
LOC122335482 LOC107568598,LOC107698767,LOC107729206,LOC107664371,LOC107710703 other upstream 12510 28843814 ~ 28846375 (+)
LOC122341400 NA other upstream 50057 28798314 ~ 28808828 (+)
LOC122341395 LOC107710694,LOC107556592,LOC107698764,LOC107729203 other upstream 150277 28707031 ~ 28708608 (+)
LOC122334878 si:ch73-374l24.1,LOC107556610,LOC107698783,LOC107664393,LOC108437159 other upstream 208235 28592804 ~ 28650650 (+)
G24115 si:ch73-374l24.1,LOC107729205,LOC107556610,LOC107698783 other upstream 298561 28515643 ~ 28560324 (+)
LOC122334478 LOC107698777,LOC107556618,LOC107664385,LOC107568597,LOC797750,LOC107729209 other downstream 9943 28869079 ~ 28933084 (+)
LOC122341401 NA other downstream 189142 29048278 ~ 29054414 (+)
LOC122335397 LOC107698766,LOC107717477,LOC107552107,LOC107671248,LOC107740236,LOC107556596 other downstream 201639 29060775 ~ 29073755 (+)
cenpx stra13,LOC107676172,LOC107689848,LOC107732147,LOC107552128 other downstream 369580 29228716 ~ 29230231 (+)
LOC122335232 LOC107677928 other downstream 439572 29298708 ~ 29306240 (+)

Expression


Co-expression Network