cenpx (stra13,LOC107676172,LOC107689848,LOC107732147,LOC107552128)


Basic Information

Item Value
gene id cenpx
gene name stra13,LOC107676172,LOC107689848,LOC107732147,LOC107552128
gene type misc
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056701.1
NCBI id CM032070.1
chromosome length 30200998
location 29228716 ~ 29230231 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU36269
GAAAAGACGTTACGACGACAGCCTGTCAGAATGGCGAACGCGGGAAACGAAGTCGCCTTTAAAAAGGAAACCGTTGGCAAACTTTTGGCACGCTCTTTCAAGGAGGACAAAACCAAAGTCAGCAGTGACGCTGTCATGCTCGTAGCGGAGATGCTGAAAGTCTTTGTCGAAGAGGCGACCCGCAGAGCCGTGAAACAGGCCGACGGTGAGGACTGTGACACCGTTGATGTTGAACACTTTGAGAAGATCCTGCCACAACTGCTTCTTGACTTTTGATTTAGCCGAGAAGCCAGCAGATGGCGACGTAACCTAGTTCTGCTGAACACGAACCTCCTGGACTCCACTCTGAAAGCTTCAATCTTTAGACGTTGTATTAAATTGTATGAAAATGTATGACCGATGTATTAAAAATTGCTATTTCA
>XM_043233420.1
GCCGTCTGTCCGGTCCGTCCTTCAGCAAACGAAGAAAGAAAAGACGTTACGACGACAGCCTGTCAGAATGGCGAACGCGGGAAACGAAGTCGCCTTTAAAAAGGAAACCGTTGGCAAACTTTTGGCACGCTCTTTCAAGGAGGACAAAACCAAAGTCAGCAGTGACGCTGTCATGCTCGTAGCGGAGATGCTGAAAGTCTTTGTCGAAGAGGCGACCCGCAGAGCCGTGAAACAGGCCGACGGTGAGGACTGTGACACCGTTGATGTTGAACACTTTGAGAAGATCCTGCCACAACTGCTTCTTGACTTTTGATTTAGCCGAGAAGCCAGCAGATGGCGACGTAACCTAGTTCTGCTGAACACGAACCTCCTGGACTCCACTCTGAAAGCTTCAATCTTTAGACGTTGTATTAAATTGTATGAAAATGTATGACCGATGTATTAAAAATTGCTATTTCAA

Function

symbol description
stra13 centromere protein X

NR:

description
PREDICTED: centromere protein X

GO: NA

KEGG:

id description
K15360 STRA13, CENPX, MHF2; centromere protein X

RNA

RNA id representative length rna type GC content exon number start site end site
TU36269 False 422 TUCP 0.47 5 29228753 29230230
XM_043233420.1 True 460 mRNA 0.48 5 29228716 29230231

Neighbor

gene id symbol gene type direction distance location
LOC122335520 LOC107675901,LOC107732152 coding upstream 630 29224992 ~ 29228086 (+)
LOC122334787 NA coding upstream 3637 29215127 ~ 29225079 (+)
fscn2a fscn2a,LOC107710702,LOC107556620,LOC107729215,LOC107568593 coding upstream 266174 28957657 ~ 28962542 (+)
otop2 otop2,LOC107710699,LOC107698768,LOC107556602,LOC107729200,LOC107664425 coding upstream 397980 28826613 ~ 28830736 (+)
amn amn,LOC107556594,LOC107710691,LOC107698770,LOC107729201 coding upstream 410614 28816578 ~ 28818102 (+)
notum1a notum,notum1a,LOC107732149,LOC107671240,LOC108438914 coding downstream 44422 29274653 ~ 29283738 (+)
LOC122335289 myadml2,LOC107671249,LOC107675441,LOC107717480,LOC107571305,LOC107552108,LOC107732151 coding downstream 54461 29284692 ~ 29287182 (+)
pycr1a pycr1a,pycr1,LOC107732146,LOC107675279,LOC107717481,LOC107671247,LOC107571301,LOC107552109 coding downstream 57907 29288138 ~ 29291444 (+)
LOC122335371 LOC107758342 coding downstream 91117 29321348 ~ 29324920 (+)
LOC122334720 LOC107570416,LOC107685875,LOC107749047,LOC107728228 coding downstream 461076 29691307 ~ 29725107 (+)
G24317 LOC107732144,LOC107572667,LOC107674215,LOC107571308,LOC107571307,LOC107674125,LOC107671260,LOC107732141 non-coding upstream 24907 29195090 ~ 29203809 (+)
G24286 NA non-coding upstream 87139 29131163 ~ 29141577 (+)
G24278 NA non-coding upstream 102650 29120746 ~ 29126066 (+)
G24270 NA non-coding upstream 210213 29009482 ~ 29018503 (+)
G24267 NA non-coding upstream 213808 28968515 ~ 29014908 (+)
G24359 NA non-coding downstream 41801 29272032 ~ 29272318 (+)
G24386 NA non-coding downstream 82498 29312729 ~ 29318597 (+)
G24398 LOC107575850 non-coding downstream 117504 29347735 ~ 29348652 (+)
G24406 NA non-coding downstream 133320 29363551 ~ 29363768 (+)
G24438 LOC105357980 non-coding downstream 270287 29500518 ~ 29501330 (+)
LOC122335397 LOC107698766,LOC107717477,LOC107552107,LOC107671248,LOC107740236,LOC107556596 other upstream 154961 29060775 ~ 29073755 (+)
LOC122341401 NA other upstream 174302 29048278 ~ 29054414 (+)
LOC122334478 LOC107698777,LOC107556618,LOC107664385,LOC107568597,LOC797750,LOC107729209 other upstream 295632 28869079 ~ 28933084 (+)
LOC122335482 LOC107568598,LOC107698767,LOC107729206,LOC107664371,LOC107710703 other upstream 382341 28843814 ~ 28846375 (+)
LOC122341400 NA other upstream 419888 28798314 ~ 28808828 (+)
LOC122335232 LOC107677928 other downstream 68477 29298708 ~ 29306240 (+)
LOC122335632 NA other downstream 161687 29391918 ~ 29402603 (+)
LOC122335508 LOC107717477,LOC107698766,LOC107552107,LOC107671248,LOC107740236 other downstream 209718 29439949 ~ 29442973 (+)
G24436 NA other downstream 269292 29499523 ~ 29500119 (+)

Expression


Co-expression Network