hs3st3b1a (hs3st3b1a,LOC107711227,LOC107672504,LOC107587963,LOC107599323,LOC107744967)


Basic Information

Item Value
gene id hs3st3b1a
gene name hs3st3b1a,LOC107711227,LOC107672504,LOC107587963,LOC107599323,LOC107744967
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056701.1
NCBI id CM032070.1
chromosome length 30200998
location 7362916 ~ 7374464 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043225518.1
GCCATTATTCTGATTTGAATgtgtaatatttgaatattagtTTTGAATATTAGTagtgttatcattttaaaaatgtgccgAAACTACATAGTGTTTTTCAGGTTGCGGGGTATGTATGACAAAAGTGTTTGTGAGTTTTGAAAAATTCTGTAATTCCATGCATTTGTctgaaagcaataaaaatattggTTAGGTATTGAACAGCAACTGGGGGGGGGGATTATTAAAAAAGGATTAATCAAAAAATTGGGCACGAATTCGGATTGGCCAATTCGGCTGCCAATCACACGCCCCTCTTCTTTAAATCCCATTCGCGGCCCGCGGTTCACTCAGACGACGAGAACCAGTGGGAGGCGACGGAGAGATGCGCAAAGACGCGCTCGTGCCGCTGTAACAACGGTGACTTCCCAAATCTCCGCTAGACCCCAACATGAAATGAATTCAACATCTGCCGGGGACGCGCGCTCCTTTTTCCCTCTCCCGCGGAGATGCCTGCACGTTACAGGGACCTATGCGGAGGAGCAAGTAACTTTGCCAATATGCCCTATTGGACATTGACATTAAACACAGGAGAGTCCTATGGAATATAGTCCGCACTGTCACTCCACTCAGCCGGCGAAAAACAAACTTTTCGTGTTCTGCATCATGCTGTCACTGTGGGTGTACATGCTGTACTGCTGCGTGGGCTACTGCTCCACCACACCGAGCTTCATGATCGAAGAAAGAAGCGGTAGGAATCCGCTCAGACCCGTCCAGAATCAAGACCCGGAGGTGTTCCTCAAAAGCCAGTCCAGGGACTTGCTAACCAACGAGAGTGATGCTGACAGCAAAGGAGACGGCTGGGAGGAAAATAGGGGCGAGGTGGCTTACGACGAGGACTCGGGAGTAGCAGGTGCCCTGAACGGCTCCGAGACCAAAAAGTTGCCCCAAGCGATCATAATAGGGGTGAAGAAGGGCGGGACGCGCGCGCTGCTCGAGTTTCTGCGCCTCCATCCCGACGTCCGCGCGGTGGGAGCGGAGCCGCACTTTTTTGATCGCAACTACGAGAAAGGACTCGAGTGGTACAGGGAACTAATGCCCAAAACTCAGGAGGGTCAGCTGACCATGGAGAAGACGCCAAGCTACTTTGTAACCAAGGAGGTCCCAGGCCGGATCCACGCCATGTCCAAGGACACTAAGCTGATAGTTGTGGTTAGAGACCCAGTAACCCGGGCGATCTCGGACTACACGCAGACCCGCTCAAAGAAACCCGACATCCCGTCCTTTGAGAGCttgactttcaaaaacatctcgGCCAATCTGATAGACTCCTCGTGGAGCGCGGTGCAGATCGGGATGTACGCCAGGCACCTGGAGCGGTGGCTGCAGTTCTTCCCAATGAACCAGCTGCTGTTCGTGAGCGGGGAGCGTCTGATCAGCGACCCGGCCGGGGAGATGGCCCGCGTACAGCACTTCCTGGGCCTGAGGAGGGAGGTCACGCACAAACACTTTCACTTTAACCCCGCCAAGGGCTTCCCTTGCCTCAAAAGAGCCGAAAGCAACAGCAAACCGCACTGCCTCGGCAAAACGAAAGGCCGCACGCATCCCAACATCCATCCCGGCGTGATTCAAAGACTGAGAGAGTTTTACAAGCCATTTAACAAAAAGTTTTACCACATGACCGGCCATGACTTCGGCTGGGACTGattttttcgttttttgtttcgttttgggAAATAATTCATTGTAAAAAGTATAGACctctattttataataatttattgaaaataatatactCACTCGGCTGCCTATCTGTTGTTGTACGTACTGCGAGTTTCTACTTTTTACATTCCGGTCGGATCTGTAAGCTTGACGTTTTGTCTTTtctaatgaggaaaaaaaaaattgtttgatgTAGGAATTTAGGGGGTGTCTGACAAAGGAAAATAGCACAATTAAACTAATTACGGGTAAATGATGAGTCGTTCATAACAGGCCCTAATTTTTGCTTTAGTAAACATTatctgctgttttatttttgaggaTTCCAGCATGCCGtccttcattttaaatttagtctCAGCTGTTCCAAAGCCACATTTTGTGGATCAATACTCATAAAGCTGGACAAACCGTCAATcgtggcagaaaaaaaaatgaggttCGGGACACCAGCTGTTTAACTCTGTTAAGGAAAAGGTCATTTTCTACATCAGCGTTATATGGGAAGTCTGCGAGGAGGAATTTTTTAACTGTGTTTGATTCTCTGTTACAAAAGTCTGAGACTGTATTTATGATTCTCAAGATGAGAATGGCAACGCAATGCAGCTGGATAGAAATGTCCACCCGTGACTTCATGTTGCTGTAAGATTTTGCATGAAACTTGTCATGATacgtttttctttaaaaaaaaaaaaagggccttttcagtatgaatatgaaatgaagATCAGTTAACTCATTTCATACCTTACAGGAATTGCAAAAGGGGAAGGTGAAATTTCCCTAGTcatgattatttttcataaatcagTGGTTGAGTTTTATTCAGCCTTTTATTATGTGCTTtcaaatgctgttgtttttataacGGACCCGATGAAAATGAGCTCAAAATGATTGTGCGCTTGTTTTTTTCCAACTTCGAACCAAACAGTCCTGTCAGAGGTATTTCTGTGCTGTGaagaaataaatctatttttaccAGAGAGTAACACGTCGTATATTCTAGTGTTTATTGATCTGTGTAGCATGAAAAGCAGGACAATTGTTTTCTACActgataataatgagaaatggttcttgagcagcaaatcagcatattataatg

Function

symbol description
hs3st3b1a Predicted to enable [heparan sulfate]-glucosamine 3-sulfotransferase 1 activity. Predicted to be located in membrane. Predicted to be integral component of membrane. Is expressed in several structures, including lateral plate mesoderm; nervous system; neural rod; pectoral fin bud; and pronephric duct. Orthologous to human HS3ST3B1 (heparan sulfate-glucosamine 3-sulfotransferase 3B1).

NR:

description
PREDICTED: heparan sulfate glucosamine 3-O-sulfotransferase 3B1-like

GO:

id name namespace
GO:0008152 metabolic process biological_process
GO:0008146 sulfotransferase activity molecular_function

KEGG:

id description
K07809 HS3ST3; [heparan sulfate]-glucosamine 3-sulfotransferase 3

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043225518.1 True 2809 mRNA 0.45 2 7362916 7374464

Neighbor

gene id symbol gene type direction distance location
LOC122341489 LOC107587965,LOC107672450,LOC107711223,LOC107744987,LOC107670478,LOC107599348 coding upstream 62183 7294957 ~ 7300733 (+)
slc16a5b LOC107672512,LOC107711222,LOC107587967,LOC107599319,LOC107744965 coding upstream 81880 7270950 ~ 7281036 (+)
metrnla metrnl,LOC107672492,LOC107711221,LOC107587969,LOC107744963,LOC107670526,LOC107599318 coding upstream 110993 7241697 ~ 7251923 (+)
tbcd tbcd coding upstream 165228 7166534 ~ 7197688 (+)
LOC122329403 fn3krp,LOC107670452,LOC104918611,LOC107599346,LOC107744985 coding upstream 198361 7160754 ~ 7164555 (+)
ttyh2l ttyh2l,LOC107744973,LOC107670532,LOC107599325,LOC107711233,LOC107672455,LOC107587999 coding downstream 245186 7619650 ~ 7648946 (+)
chmp6a chmp6a,LOC107744992,LOC107599353,LOC107711234,LOC107672453,LOC108432238 coding downstream 275165 7649629 ~ 7655190 (+)
LOC122334406 LOC107587953 coding downstream 411652 7786116 ~ 7796653 (+)
ptger1c ptger1c,LOC107757344,LOC107567231,LOC107672434,LOC107670435,LOC107711161,LOC107587998 coding downstream 426832 7801296 ~ 7807762 (+)
LOC122331730 NA coding downstream 600079 7974543 ~ 7977890 (+)
G17808 LOC107587964,LOC107599321 non-coding upstream 48764 7310174 ~ 7314152 (+)
G17806 NA non-coding upstream 79970 7265343 ~ 7282946 (+)
G17791 NA non-coding upstream 96194 7194782 ~ 7266722 (+)
G17704 NA non-coding upstream 386651 6922196 ~ 6976265 (+)
G17699 NA non-coding upstream 459755 6902746 ~ 6903161 (+)
G17861 NA non-coding downstream 18127 7392591 ~ 7392872 (+)
G17862 NA non-coding downstream 23775 7398239 ~ 7398465 (+)
G17867 NA non-coding downstream 34774 7409238 ~ 7409540 (+)
G17912 NA non-coding downstream 297239 7671703 ~ 7728184 (+)
G17928 NA non-coding downstream 450722 7825186 ~ 7825842 (+)
G17590 NA other upstream 806166 6504915 ~ 6556750 (+)
LOC122341437 LOC107718607,LOC107653460 other upstream 1167878 6186808 ~ 6195038 (+)
fbxw9 fbxw9,LOC107661857 other upstream 1259290 6098201 ~ 6103626 (+)
LOC122341474 dhps,LOC107661880,LOC107563249,LOC107653447,LOC107718601,LOC107563248 other upstream 1400028 5957403 ~ 5962888 (+)
G17302 NA other upstream 1764684 5597099 ~ 5598232 (+)
LOC122331592 LOC107744988 other downstream 208890 7583354 ~ 7591526 (+)
baiap2a baiap2a,LOC107672452,LOC107711237,LOC107670476 other downstream 281567 7656031 ~ 7725519 (+)
slc27a1a slc27a1a,slc27a1,LOC107670527,LOC107757377,LOC107567246,LOC107711240,LOC107672489,LOC107587997 other downstream 433779 7808243 ~ 7821078 (+)
LOC122341274 LOC107711242,LOC107672448,LOC107588011,LOC107757354,LOC107670494 other downstream 464492 7838956 ~ 7841669 (+)
LOC122331768 LOC107710248 other downstream 575297 7949761 ~ 7950417 (+)

Expression


Co-expression Network