LOC122329328 (hebp1,LOC107670539,LOC107661078)


Basic Information

Item Value
gene id LOC122329328
gene name hebp1,LOC107670539,LOC107661078
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056701.1
NCBI id CM032070.1
chromosome length 30200998
location 8385064 ~ 8388690 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043225569.1
cacacacacacacacctgacggAGGCTCGTTTCTTCAGCTGCGTTCATCATGTTTGTCATGATCAAAAACTGGCTGCTTGGAGCCACCGAAGAGAGCGAGTATAAACTGCTGAGCACCGAGTGcaaggatgGGGTGAGTTATGAGGTGCGCCGCTATGATGCGTGTAAGCATGTTTGTGTGAGTCTGGAGGGGCGGAGCTTTGACCAGGTGTCAGGTGATCTTCAGCGAAAGCTTCTCGACTACATGAGCGGCGACAACGAACAAGGTGAGGTGATGAACACACCTGTCCCCATCATCTTCACCGTGTTCCCGCGTGACGACGGCTCGTTAAACCGCCGGCTGGTCGCCGCTCTGCGTATCCCAGTCTCCTTCCAGATCAGCCCGCCCAACCCGACCGACTCGTCCATTCGGATCGAGGAGCGGCCCGGCATGACCGTCTACGTGCTGCGCTTCGGGGGTTTCCCGGGAGAGAGCGAGTTTCGCGCGGAAGCCTCACGACTGACGTGTACGCTGGGAGACTCCGCCCCCTTCCTGCGCAAACAGTACCTGTGCTGCATGTACGACCCGCCCATCAAACCCTACGGCCGCCGGAACGAGGTGTGGTTCCTGCAGGACGAGCCCTGAATCCCCCGCTTACCCAGAATCCTCCGCGGCGTGTTGACTTCCAGTAGAGTAGAGGACCGCGAGGAAAACCTCTTCTTTTGTGTGATTCAGACTCAGCTGCTTGATGtcgtgttattttaataaacactggTTTATA

Function

symbol description
hebp1 Predicted to enable heme binding activity. Predicted to be involved in circadian rhythm. Located in extracellular exosome.

NR:

description
PREDICTED: heme-binding protein 1

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043225569.1 True 761 mRNA 0.57 4 8385064 8388690

Neighbor

gene id symbol gene type direction distance location
LOC122341283 hebp1,LOC107670539,LOC107661078 coding downstream 79071 8302071 ~ 8305993 (-)
LOC122331822 NA coding downstream 127851 8234899 ~ 8257213 (-)
LOC122334091 NA coding downstream 207069 8174036 ~ 8177995 (-)
irgf4 NA coding downstream 264035 8109057 ~ 8121029 (-)
LOC122331782 NA coding downstream 293440 8084369 ~ 8091624 (-)
LOC122331080 emp1,LOC107573034,LOC107698066,LOC107732522,LOC107678994 coding upstream 110042 8498732 ~ 8502673 (-)
zgc:65811 LOC107656948,LOC107698068,LOC107751600,LOC107575948,LOC107569882,LOC107732520,LOC107732523 coding upstream 124723 8513413 ~ 8524779 (-)
LOC122341497 NA coding upstream 142136 8530826 ~ 8535042 (-)
pde6hb LOC107724721 coding upstream 146421 8535111 ~ 8537581 (-)
LOC122330990 LOC107656950 coding upstream 323788 8712478 ~ 8714195 (-)
G18129 fam234b,LOC107714892,LOC107721680,LOC107576065 non-coding downstream 1453 8300414 ~ 8383611 (-)
LOC122331391 NA non-coding downstream 67975 8314102 ~ 8317089 (-)
G18147 NA non-coding downstream 173765 8158064 ~ 8211299 (-)
G18128 NA non-coding downstream 177731 8206878 ~ 8207333 (-)
G18146 triobp,stap2,triobpb,LOC107574640,LOC107721687,LOC107661081 non-coding downstream 186977 8194376 ~ 8198087 (-)
G18183 NA non-coding upstream 12940 8401630 ~ 8404572 (-)
LOC122333427 NA non-coding upstream 32512 8421202 ~ 8421632 (-)
G18193 LOC107573033,LOC107758359,LOC107732521,LOC107569877 non-coding upstream 93957 8482647 ~ 8679157 (-)
G18196 NA non-coding upstream 107226 8495916 ~ 8497007 (-)
G18225 NA non-coding upstream 186621 8575311 ~ 8575731 (-)
LOC122342198 NA other downstream 166009 8218902 ~ 8219055 (-)
fam234b srebf2,fam234b,LOC107690127,LOC107676178,LOC107572757,LOC107745393,LOC107576065,LOC107574637,LOC107721680,LOC107714892 other downstream 166976 8054039 ~ 8218088 (-)
LOC122339740 NA other downstream 175971 8207698 ~ 8209093 (-)
LOC122334075 NA other downstream 213403 8058631 ~ 8171661 (-)
LOC122331739 NA other downstream 370363 8010976 ~ 8014701 (-)
zgc:113210 NA other upstream 604024 8992714 ~ 9007443 (-)
LOC122331343 LOC107672446,LOC107711185,LOC108429658,LOC107579184,LOC107567225,LOC106600921 other upstream 745353 9134043 ~ 9138089 (-)
G18433 LOC107670519,LOC107563315 other upstream 1037882 9426572 ~ 9462905 (-)
rbfox1 rbfox1,LOC107733849,LOC107690317,LOC107685930 other upstream 1605143 9993833 ~ 10210616 (-)
eef2kmt eef2kmt,LOC107690238,LOC107733874,LOC107568155,LOC107680861,LOC107738633 other upstream 2005624 10394314 ~ 10396341 (-)

Expression


Co-expression Network