LOC122329403 (fn3krp,LOC107670452,LOC104918611,LOC107599346,LOC107744985)


Basic Information

Item Value
gene id LOC122329403
gene name fn3krp,LOC107670452,LOC104918611,LOC107599346,LOC107744985
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056701.1
NCBI id CM032070.1
chromosome length 30200998
location 7160754 ~ 7164555 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043225607.1
GCAACAGTAATCCTGAACGCCCGTGTTGTTACACGAGCGCTTGTAATCAAACAGGGACATTTACGCGGCACTTAAAAGTAGGTTAGAGCAAAAACCAGTCCCGCAGAAACGCATTGGTTTTTATGTCGAGCTTATGGCTGTGCGAGCACTGTGAAGCGAGATGGAGGCGCTGCTGAAGAGAGAGTTGGGCACCTCTCTTCTGAAGAGCACTGGTCACTCAGGGGGAGGATGCATCAGCGAAGGCCAGAGCTTTGACACCGACACCGGCAGGGTGTTCGTTAAGATCAACCACAAGAATGAGgcTAGGAGGATGTTTGATGGAGAAATGGCGAGCTTGGAAGCGATCTTGGGGACAGACACAGTGAAAGTGCCCAGGCCTGTGAAAGTCGTGGACCTCGAGAGCAGCGGAGCTCTTTTCGTCATGGAACATATTGATATGAGGAGCTTGAATAAATGCTCTTCAAAACTGGGGGAGCAACTTGCCGATCTACATCTTCACAACAAAAGACAGATAGAGAAACTTAACAAGGAACAGCAGACTGTTGGAAAAGGATCGGGAACGTCTGAAGTTCAAATAGTCAACAAGTTTGGGTTTCATGTGAATACCTGCTGTGGTTATCTCCCTCAGGTAAATGATTGGCAGGATGATTGGGTGTCCTTTTACGCTCAGCAAAGACTGCAGCACCAGCTCAGTTTGGTGGAACAGTCGTATGGAGACCGAGAGGCCAGGGAATTGTGGGCCAGACTTCAACTGAAGGTCCCTCAGCTGTTTGCAGACACAGAGGTGGTTCCAGCTCTGCTTCACGGAGATCTCTGGGGAGGAAACGTGGCTGAATGCTCTGACGGTCCTGTCATCTTTGACCCAGCGTCCTATTATGGCCATTCAGAGTTCGAGCTGGCTATTGCTGGCATGTTTGGTGGTTTTGGGGGTTCGTTTTACAGTGCTTACCATGAGAAGATCCCCAAGGCCGCTGGCTTTGCAAAGAGGCAACAACTGTACCAGCTGTTCCACTATCTGAACCACTGGAATCATTTTGGTGGTGGCTACAGGGGTTCTTCTGTGCGGATCATGAAGGATCTAGCAAAGTAGATACACCCCGATTTATTAAAGTATCCCCTTCAAATGGTCATTAAAGAAGATGGAACTAATTAAGTCACACATTTTGTGCATGACCAGGTAAACTTAATCCAGCTGTACCAGTCTAATGGAAATGCATTGACAAGATAAAAGTCTGCTGTCTTAAAGTTACTTAcacagattaaaaaagaaagtcttatgtatattatatatattttaaagcataaatctGTGAATTTATTCCAAACAATGGCCAAAAGGTATGTTGGTTACAAGATCATTCCCTTTTTGTGAATTGCACTTATGATTGAATGCTCTTAAAGAGATCCTCATTAACAAGattgcttgatttaaaaaaaatgtgtgcactAAGTAGCATAATATGAGTTACATTTCACTACGATTACttactattaatttaattgtttgagACAATTTATAGTGAGTCGTTGAACTGTAAACTTTCAGCTTGCAGGAGTCTCATCAGATCCGTTTGgacattcaaataaaactttaaagagaa
>XM_043225616.1
GCAACAGTAATCCTGAACGCCCGTGTTGTTACACGAGCGCTTGTAATCAAACAGGGACATTTACGCGGCACTTAAAAGTAGGTTAGAGCAAAAACCAGTCCCGCAGAAACGCATTGGTTTTTATGTCGAGCTTATGGCTGTGCGAGCACTGTGAAGCGAGATGGAGGCGCTGCTGAAGAGAGAGTTGGGCACCTCTCTTCTGAAGAGCACTGGTCACTCAGGGGGAGGATGCATCAGCGAAGGCCAGAGCTTTGACACCGACACCGGCAGGGTGTTCGTTAAGATCAACCACAAGAATGAGgcTAGGAGGATGTTTGATGGAGAAATGGCGAGCTTGGAAGCGATCTTGGGGACAGACACAGTGAAAGTGCCCAGGCCTGTGAAAGTCGTGGACCTCGAGAGCAGCGGAGCTCTTTTCGTCATGGAACATATTGATATGAGGAGCTTGAATAAGTACGACTCCAAATCACGTGAACCCGTCATAATAGGAGTAAATGATTGGCAGGATGATTGGGTGTCCTTTTACGCTCAGCAAAGACTGCAGCACCAGCTCAGTTTGGTGGAACAGTCGTATGGAGACCGAGAGGCCAGGGAATTGTGGGCCAGACTTCAACTGAAGGTCCCTCAGCTGTTTGCAGACACAGAGGTGGTTCCAGCTCTGCTTCACGGAGATCTCTGGGGAGGAAACGTGGCTGAATGCTCTGACGGTCCTGTCATCTTTGACCCAGCGTCCTATTATGGCCATTCAGAGTTCGAGCTGGCTATTGCTGGCATGTTTGGTGGTTTTGGGGGTTCGTTTTACAGTGCTTACCATGAGAAGATCCCCAAGGCCGCTGGCTTTGCAAAGAGGCAACAACTGTACCAGCTGTTCCACTATCTGAACCACTGGAATCATTTTGGTGGTGGCTACAGGGGTTCTTCTGTGCGGATCATGAAGGATCTAGCAAAGTAGATACACCCCGATTTATTAAAGTATCCCCTTCAAATGGTCATTAAAGAAGATGGAACTAATTAAGTCACACATTTTGTGCATGACCAGGTAAACTTAATCCAGCTGTACCAGTCTAATGGAAATGCATTGACAAGATAAAAGTCTGCTGTCTTAAAGTTACTTAcacagattaaaaaagaaagtcttatgtatattatatatattttaaagcataaatctGTGAATTTATTCCAAACAATGGCCAAAAGGTATGTTGGTTACAAGATCATTCCCTTTTTGTGAATTGCACTTATGATTGAATGCTCTTAAAGAGATCCTCATTAACAAGattgcttgatttaaaaaaaatgtgtgcactAAGTAGCATAATATGAGTTACATTTCACTACGATTACttactattaatttaattgtttgagACAATTTATAGTGAGTCGTTGAACTGTAAACTTTCAGCTTGCAGGAGTCTCATCAGATCCGTTTGgacattcaaataaaactttaaagagaa

Function

symbol description
fn3krp Predicted to enable kinase activity. Predicted to act upstream of or within phosphorylation. Orthologous to several human genes including FN3KRP (fructosamine 3 kinase related protein).

NR:

description
PREDICTED: ketosamine-3-kinase-like

GO:

id name namespace
GO:0016310 phosphorylation biological_process
GO:0016301 kinase activity molecular_function

KEGG:

id description
K15523 FN3KRP; protein-ribulosamine 3-kinase

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043225607.1 True 1601 mRNA 0.44 6 7160754 7164555
XM_043225616.1 False 1463 mRNA 0.44 4 7160754 7164555

Neighbor

gene id symbol gene type direction distance location
si:ch211-207b24.4 NA coding upstream 3457 7148922 ~ 7157297 (+)
ppap2d ppap2d,LOC107661820,LOC107711217,LOC107602726,LOC107744960,LOC107670514,LOC107599313 coding upstream 271949 6862409 ~ 6888805 (+)
tnfsf14 LOC107744984,LOC107661863,LOC107711150,LOC107602699 coding upstream 314113 6841019 ~ 6846641 (+)
dnm2a dnm2a,LOC107661823,LOC107602725 coding upstream 327530 6796786 ~ 6833224 (+)
trim35-12 LOC107670464,LOC107602713,LOC107599344,LOC107728678,LOC107711176,LOC107661834 coding upstream 476556 6679181 ~ 6684198 (+)
tbcd tbcd coding downstream 1979 7166534 ~ 7197688 (+)
metrnla metrnl,LOC107672492,LOC107711221,LOC107587969,LOC107744963,LOC107670526,LOC107599318 coding downstream 77142 7241697 ~ 7251923 (+)
slc16a5b LOC107672512,LOC107711222,LOC107587967,LOC107599319,LOC107744965 coding downstream 106395 7270950 ~ 7281036 (+)
LOC122341489 LOC107587965,LOC107672450,LOC107711223,LOC107744987,LOC107670478,LOC107599348 coding downstream 130402 7294957 ~ 7300733 (+)
hs3st3b1a hs3st3b1a,LOC107711227,LOC107672504,LOC107587963,LOC107599323,LOC107744967 coding downstream 198361 7362916 ~ 7374464 (+)
G17704 NA non-coding upstream 184489 6922196 ~ 6976265 (+)
G17699 NA non-coding upstream 257593 6902746 ~ 6903161 (+)
G17683 NA non-coding upstream 313148 6846938 ~ 6847606 (+)
G17663 NA non-coding upstream 455349 6705195 ~ 6705405 (+)
G17662 NA non-coding upstream 456052 6704414 ~ 6704702 (+)
G17791 NA non-coding downstream 30227 7194782 ~ 7266722 (+)
G17806 NA non-coding downstream 100788 7265343 ~ 7282946 (+)
G17808 LOC107587964,LOC107599321 non-coding downstream 145619 7310174 ~ 7314152 (+)
G17861 NA non-coding downstream 228036 7392591 ~ 7392872 (+)
G17862 NA non-coding downstream 233684 7398239 ~ 7398465 (+)
G17590 NA other upstream 604004 6504915 ~ 6556750 (+)
LOC122341437 LOC107718607,LOC107653460 other upstream 965716 6186808 ~ 6195038 (+)
fbxw9 fbxw9,LOC107661857 other upstream 1057128 6098201 ~ 6103626 (+)
LOC122341474 dhps,LOC107661880,LOC107563249,LOC107653447,LOC107718601,LOC107563248 other upstream 1197866 5957403 ~ 5962888 (+)
G17302 NA other upstream 1562522 5597099 ~ 5598232 (+)
LOC122331592 LOC107744988 other downstream 418799 7583354 ~ 7591526 (+)
baiap2a baiap2a,LOC107672452,LOC107711237,LOC107670476 other downstream 491476 7656031 ~ 7725519 (+)
slc27a1a slc27a1a,slc27a1,LOC107670527,LOC107757377,LOC107567246,LOC107711240,LOC107672489,LOC107587997 other downstream 643688 7808243 ~ 7821078 (+)
LOC122341274 LOC107711242,LOC107672448,LOC107588011,LOC107757354,LOC107670494 other downstream 674401 7838956 ~ 7841669 (+)
LOC122331768 LOC107710248 other downstream 785206 7949761 ~ 7950417 (+)

Expression


Co-expression Network