LOC122329817 (LOC100537134)


Basic Information

Item Value
gene id LOC122329817
gene name LOC100537134
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056701.1
NCBI id CM032070.1
chromosome length 30200998
location 1230001 ~ 1234904 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043226420.1
CTTTGCGTTTGCAGTTTTAACCGTTAGTTGGTTGCTACAGGCGATCGGTgtggaaatatttatttcatttacgtTTTATGTTGAATGGTGTAGATATAACTTGTATGCAATTTTATATGCGTCTTAAAGTAGgctataaaaagtgtttttccacAAACCCCACCCACACCCGTTTCTTCCTGCTTTTATGAAGGGAATGACGAGCCTGGACACGCAGATGTTTAGTGTGCGTCAGTGAAATCAGTTCAATGTCTGAAAGGATAATGAAAAGAAGATCAGCTCATGACTGAAGGAAGGCCATAATATCAACATGGCCACCAGAGAAAGCAGAGCTGTGGTTCACGGTTCTGCTCTCAGGAGAAGACGGAGCAAAGAAATAGAGACACCCAACCTTGCAGAGCGCGTGAAGCTGAATCTGGTTGTGTGCGGGAGCGATGGGAGATTGAAATCCTCCGTATCGGAGCAGATCCTGCAGAAGGAGCTTGATGATCCTCAGATCAGTCTGCTGGAGCTCCCAGCTCTGATTCGTCTCTCCGAGGAGGAAGTGATGCGCCAGGCTCTCCGCTGCGTGTCTCTCTGCGATCCTGGAGTTCACGTTTTCCTCCTCGTTGTTCCTGCTCCGCTCAATAACGAGGACAAAGCAGAAATGGAGGAGATCCGGAAGATCTTCAGCTCGAGAATCAACAAGCACGTCTTGATCCTCATAAAGAGTTCAGAGCATCAGGGAGAGGAACTCGGTGAAGAAACGCGGTCTGTCATCCAGAGCTTTGGGGGACGATATTGTTTCATTGGTCAAACGTCTAAACTGATGGAGAAAATCGAGCTGATGCTGGAAGAAAACAGAGGAGAGCGTTTCTCCACAAAGACGTTTCTGGAGGCACAGGTGAAAAAACTGATGGCGTATAAagagatgaagaagaaaatCCACTCACTAGAGACGCGTTTACATTTACTCTCAGAAGGTTCCAGAGGAAACGTGGATGATGAACTGAGGATTGTGCTGCTGGGAAAAACTGGGGTTGGGAAAAGCGCAACCGCAAACACTATATTAGGAAGAAACACTTTTATAGCAGAAGCGTCTTTCGATTCGGTGACTAAAGAGAGTCAGAGAGAATCGTCTCAAATCAGCGGTCGACGAGTCACTGTGATCGACACCCCGGGACTGTTTGATACTGAACTGAGTAACGAGGAGATCCAGAGAGAAATCACCAACTGCATCTCCATGATCCTGCCTGGACCGCATGTGTTTCTCTTACTGATACCGCTGGGACGATTCACTAAACACGAGGAAACATCTGTGAAGATCATCCAAGAGACGTTTGGTGAGAAATCGTTGATGTACACCATGGTGCTCTTCACCAGAGGAGATGATCTGAAGAACAAAACCATTGAGCAGTGTTTGGGGAAGCCTGGATCTCCATTGATGAAGCTGATCGAAGCGTGTGGAAACGGGTACCACGTGTtcaataataatcagacagaAGACCGAACACAGGTGACTGATCTGCTGGAGAAGATAGACCACATGGTGAAAGCAAACGGAGGGAGTTTCTACTCGTGTAAGATGttcagaaagatggagagagaaaaacaagaacaacagGTGAAGATCCTGATGGACAGAGTGGAGCAACTGAACAGAGAAAACGGAGAACTGGTGAAAAAACATAACGAAGATAAAGATAGAATAAAGATGAGGATGGAAGAAGAACAACAGAAtcgggagaaagagagaaagagaagagaggaggaaCTGGAAAGAGAAATACGAGAAATACGAGATGAGATGAGACGAGAACGAGAGACGTTTAGACatgaaaaacaggaaatgagggAAGAAAAAGATAAAGTAAAGAAGGAAAGAGACGGGCTGATGAACAAAATAGAGAACGAAAAACAGAATCAcgaaaaagagagaaggagaagagaagaagagttTAACGAAACAGAAGAAcgttacaaaacacaaataaaagagaAGGAAGGACTGATGAAAACacaagaagaagagaaagagagaactgatgaggagagaaagagggtAGAAGAGAAATTCAGAAAGCTGGAAGAAAGATATCAAACACTCAtcaaagagaaagaagagagtgAGGAAATCTCTTCATCTAAAcacgaagaagaagaaaacaagactGAGAGAatgaggggagaaaaaaaagaactggtGACGAAACTGGAAGAAGATGAAAAGagaatgaagatgatgatggagaaagaaagaagggatcaagaaaaacagaaacaagagGAAAGACcgaaaagagaagaagagaagaagaaaaacgaAGGAACAGAAAAACAGGAATCTAAACCTTACAAGAAAGTTCCCGAAAACGATGAAGAGAGACGAGATGCACACGATGATCAACAGACGGATGTGAGGATAGTTCTTCTGGGTCAAACTGGTGTCGGGAAAAGTGCGTCTGGAAACACAGTCCTGGGACAGAAAGTGTTCAGATCTAAGATGAGCTTGAATGCGGTGACCAGTGAATGTTCAGAAGCTCACGCCACTGTTTCGGGCCGATCGGTGTCTGTAGTAGATACTCCTGGATTCTTCGACACACAGATGAGGCCTGAGTTAGTGCCAAAAATAgggaaaagtgtttatttatccaGTCCTGGACCTCACGCTTTTCTCATTGTGTTTCCTGTGATCATGAGATTCACTGATCAGGAGTTAGAGGTTCCTCAGCAGATTGAGGTGATGTTCGGAGAGGAGGTGTTAAAATACTCCATCGTTCTCTTCACTCATGAAGATCTGCTGGTTAGAGAGTCTGTAGAGGAACTCATTGAAGATAACTACAGATTTAGACGTCTAGTAGATCAGTGTGGAGGAAGATATCAGGTGTTCAACAATAAAGATCTGAATAACAGAGAGCAGGTGTATGATCTGCTGCAGAAGATTGACTCAATGATAAAGCAGAACGGAGGACGACACTACAGTAATCAGATGTTTGAAGATGCTCAGAGATTCAGAcgagaggaagaagagagactgagagaggaacaagagagaaagagagaggaagaagaaaggAGACGACGACAAACCAAGTGTGTCTGTAGTTGACGATTGTGCATTCTTCGAACACGGTTAATGACAGAGATCCTGAAAGATCCTGGATCTCGTgcttttcttgtgtttaacGCGTTTAATAGATTCACTGATCAAGAGGAGTTTCAGTGTCGAAGAAATTTCCAAATACATTCTATTTACTAGATTTGCCAAAAGAAAACCCTCCAAAAAAAGCACAGGTTAGTTGATCTAGTTGATGGAGGTAGAGTTCACATTTCAGTTGATTAATGATTATTCCGTGTCATTTGTATCAAATGATGCCTGGTTTATCAATTTATCCACTTGCTTTGTTTCTACTAGCTATTGTTTGTCATTGCACCCTTTTAGTGCTactctttttttgttgcatgtaCATTGTGAAATTTCATTGAGCCCTGGAAAGGTGCTATAAATAAAGCTCTTTTGAAGATG

Function

NR:

description
GTPase IMAP family member 8-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043226420.1 True 3505 mRNA 0.43 6 1230001 1234904

Neighbor

gene id symbol gene type direction distance location
sox10 sox10,LOC107674484,LOC107711804,LOC107563722,LOC107727045,LOC107679477 coding upstream 5084 1217521 ~ 1224917 (+)
kcnj4 kcnj4,LOC107711802,LOC107679476,LOC107727044 coding upstream 31963 1188018 ~ 1198038 (+)
LOC122330304 LOC107561208,LOC107727047,LOC107679470 coding upstream 50660 1176232 ~ 1179341 (+)
LOC122329844 LOC107563756,LOC107731666 coding upstream 53930 1160237 ~ 1176071 (+)
LOC122330224 NA coding upstream 72562 1154623 ~ 1157439 (+)
LOC122332730 NA coding downstream 137628 1372532 ~ 1374290 (+)
LOC122329966 NA coding downstream 141545 1376449 ~ 1380026 (+)
LOC122330340 NA coding downstream 152580 1387484 ~ 1389699 (+)
LOC122330593 polr2f,LOC107727050 coding downstream 180713 1415617 ~ 1418312 (+)
LOC122330185 micall1,LOC107727039,LOC107674481,LOC107711806,LOC107563760 coding downstream 215334 1450238 ~ 1453084 (+)
G15927 NA non-coding upstream 14396 1215316 ~ 1215605 (+)
G15925 NA non-coding upstream 16373 1213325 ~ 1213628 (+)
G15911 NA non-coding upstream 76773 1152825 ~ 1153228 (+)
G15887 NA non-coding upstream 98526 1129892 ~ 1131475 (+)
G15889 NA non-coding upstream 106701 1121340 ~ 1123300 (+)
G15929 NA non-coding downstream 5442 1240346 ~ 1241047 (+)
LOC122330723 NA non-coding downstream 44359 1279263 ~ 1281171 (+)
LOC122330682 NA non-coding downstream 148344 1383248 ~ 1384894 (+)
G15967 NA non-coding downstream 179311 1414215 ~ 1415199 (+)
G15972 NA non-coding downstream 206355 1441259 ~ 1441742 (+)
LOC122330066 NA other upstream 178850 1047012 ~ 1051151 (+)
LOC122330135 NA other upstream 220570 1005983 ~ 1009431 (+)
LOC122330463 NA other upstream 454467 754430 ~ 775534 (+)
LOC122330407 NA other upstream 593762 625364 ~ 636239 (+)
G15563 NA other upstream 672920 553698 ~ 557081 (+)
G15939 NA other downstream 56065 1290969 ~ 1291564 (+)
G15955 NA other downstream 155835 1390739 ~ 1392850 (+)
LOC122330032 LOC107674481,LOC107727039,LOC107711806,LOC107563760 other downstream 160943 1395847 ~ 1408926 (+)
G16003 pick1,LOC107734822,LOC106607154 other downstream 324483 1559387 ~ 1649494 (+)
G16002 pick1,LOC107734822,LOC107734770 other downstream 384408 1619312 ~ 1865229 (+)

Expression


Co-expression Network