LOC122329952


Basic Information

Item Value
gene id LOC122329952
gene name NA
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056701.1
NCBI id CM032070.1
chromosome length 30200998
location 215085 ~ 219114 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043226671.1
CTGGGATTTTCAGTTTCGCTATCAGCGCACGAAACCGACTATCTCAGAAAATGAAAATCTCGTAACACCGATCGGTTCTTCGCCGAATCTCAAAAAGCGTCATATTTCGAGTGCATCGCCGTTTCAAGCCGAACCCGTTCAAAGGTTAATAATTGTCTTGAGGAGGAGCACGTCCACGCAGACAAAACTGAAAAAGCGTTATCGTTGTTGAACCGCACTCGTTTGACATGGCGGAGAGGACTTCCTCATCTGCAGATGATCCAGTGATCCGGATTCTTCTGGTGGGCAGGAAGGGTTCTGGGAAAAGCTCATCTGGAAACACGTTACTGGGAAAAAAGTTCAAAGTTCACAAACACAAGACGAAACATGAAACGAAAATTTGTGATGGTAAAACACAAATCTGTGGGAAGCAGGTTGCCGTGATCGATTGTCCGGATTTACTGGATCAAGATTTGAGTGATCAGAAGCTGAAGAAACTGAAAGAGAAGCTGGTCTCTCGATGTTCAGCGGGTCTCAGCGCCGTCCTGCTCACCGTTCCTCTGGAGGAAACTGTGGAAAACGAGGAAGAGATCCTGCATTTTATCAAAGGTTTATTTGGTCCTAAAGTTCAGAAGTACATAATGGTTCTGTTTACACGAGGAGATGAACTGGAGGAGCTGGAAGAACCACAAAGCATTGAGCAATATCTGGACAGTGAAGAACATAAGGATCTCCAGCGACTGGTGACTGAATGCGGAGGAAAGTTTCACTGTTTAGATAACAAGAGAAAATCAGACAGTCAGATACGAGAGCTGCTGCAGAAGATTGACAACATGACGGTGGAGAACGGAGGGAAGTTTATCATGGAGGAAATGAAAAGGAGGGACAGCAAGGAGATTCGTGTAAATTTTTCAGACGTGTCTCCAGCTGATGATCCAAGTCAGATTCAAGCCATTCCTGATAGGAAAGACCAGATCAGGCTGGTTCTGCTGGGAAAAACTGGAGCTGGGAAAAGTGCCACTGGAAACACCATCATCGGCAAAAAAGTGTTTGAATCGTCCATCAGCTCAGACTCTCAAACAAAACAGTGTCACTTAGAAACCAATGAGAGGATGGGTAAAAACATCTCGGTGGTCGACACTCCTGGACTTTATGATACCGCAAACACTGAGGATGAGGTTGAAAAGGAAATAGGGAAATGCATAACATATGCTTCTCCAGGACCACACgcttttattattgtgattagACTGGGTCGCTTCACCGAAGAGgagaaaaatacagtacaggAGCTGAAGGAACTGTTTGGAGAACAGATAGAAAAATACACCATGATCCTCTTCACTCACAAAAATCAGTTAGAGAAGGAAAATAAAACCATCGAAGAGTTTCTACAGCTGGGTAATTCTGATCTGCAAGCCCTCGTACGCAGCTGTGGAAACCGGTTCTTCTGTCTGGACAACGAGTCTGCTGGATATCCACAAATCAAAGATCTGATCGGTAAAATAGAGTTGATGGTGGAGGAAAACGGCGGGGCGTACTTCACCAACAGCATGTTTGAAGACACTCAGAAACACATTCAGGAGATCTTGAACAAGAAGCTTGACAAAACGCGAAAGCAGTTTAAGAAGGAACACAAACAAGTCTCTCAAACGGAGTGGGAGAAGATATACTGGAGTTTAGTAGAGGAATCGAGACACGAAGCTGCGGAGTCGTTAACGGACTCGTTGATTGCTGCTTTAGCCAGAGCTCTGAAGAAAGTAGTGGTGACGCGCGAGGAGAAAGAGAGTGCCATAAAGCAGGCTGAGAGCAAAGGAATCAGTCATACAGAGGCTGTCCGGCTCGCAGCCAGAGCCACAGGGACACTAGCCAAGCAGAAGTTGTGTGGGATTCAGTGAGGAGACTGATTTATTCAATTCGCTTCAAGTTGGTTTTCATAGGGCTTCAAAGAACATTACAGAAAACACTTTCCTCTCAGCTCAACCAGAGGTCCTGAGCTAAACTAGATAAATCTCTagttttgatattatttttttgtatttgattttacaaaaaagtgCCTGTTgactgtcaatgtttttttttcttttgatctgTAATGCATTAGAGTACACTGAAGGCTGATCCAGACCGTGATAAAACGCCTCATTTAAGCACACCTCCACAGGTCACAGTGTGG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043226671.1 True 2158 mRNA 0.44 5 215085 219114

Neighbor

gene id symbol gene type direction distance location
LOC122331645 LOC107736793 coding upstream 200929 7079 ~ 14156 (+)
LOC122330203 NA coding downstream 26114 245228 ~ 268255 (+)
LOC122331655 NA coding downstream 47216 266330 ~ 278232 (+)
LOC122329895 NA coding downstream 70328 289442 ~ 293412 (+)
LOC122331907 NA coding downstream 231357 450471 ~ 452874 (+)
LOC122332242 NA coding downstream 350210 569324 ~ 571953 (+)
G15459 NA non-coding upstream 7308 10442 ~ 207777 (+)
G15520 NA non-coding downstream 102241 321355 ~ 354219 (+)
G15524 NA non-coding downstream 132850 351964 ~ 353083 (+)
G15527 NA non-coding downstream 142805 361919 ~ 367951 (+)
G15507 NA non-coding downstream 202421 421535 ~ 422898 (+)
LOC122330779 NA non-coding downstream 235652 454766 ~ 456666 (+)
G15563 NA other downstream 334584 553698 ~ 557081 (+)
LOC122330407 NA other downstream 406250 625364 ~ 636239 (+)
LOC122330463 NA other downstream 535316 754430 ~ 775534 (+)
LOC122330135 NA other downstream 786869 1005983 ~ 1009431 (+)
LOC122330066 NA other downstream 827898 1047012 ~ 1051151 (+)

Expression


Co-expression Network