LOC122329984


Basic Information

Item Value
gene id LOC122329984
gene name NA
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056701.1
NCBI id CM032070.1
chromosome length 30200998
location 1085289 ~ 1089633 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043226728.1
aagaagagacgAGCACCGAGCTGCTGTTTCTAAACCGAAGAGAGAGCatgcagaaaacacagaaaccTGTAAAGACAGAAGATCACAGAGACAGCACGAGAGCTCCAGAACCCCACGAAGAAAGAGaGGTGACTGAAGAAAACGAGAATGTAGAACTGAGTGAAGCTGAGGGTAGAAGAACTCGCtctcaaacaaaacagaaagtttTAAAGAAAGGAATAGGCAGGAAATCTTTCACCTGCACTCAGTGTAAAAAGActtttacatgcaaatatagTCTTGATGTTCACGTGAGAAtgcacaccggagagaaaccatataagtgttcacactgtgacaagagaTTCAGTCATTCAGGAGATCTGAAAAGacacgagaggatccacaccggagagaaaccgtactCATGCTGTCTCTGCGGGAGGAGTTTCACACTAAAAAGAGCCCTTACACAGCACATGAGAGTTCataccggagagaaaccgttcaCTTGTGATcaatgtggaaagagtttcacacAGTCATCAAGCCTTAAAGATCACAGGAACATCCACACCGGAGAAAAACCGTATTCGTGTGACCAATGCGACAAAACGTTTACGTGGGCCTCGGTCCTGAAGAAACACCTGAATGTTCACACAAAGGAGAAGCCGCATTCGTGTCATTTGTGTGGAAAGACCttttcatataaacaaaatcTGAGAGAACATCAGAAAACACATACCGGTGTGAGAGAGCACATGTGCTTTGAGTGCGACAAGACTTTTACTTCAGCGAAGTATTTAAAATTGcacgagaggatccacaccggagagaaaccttacaAGTGTTCACGCTGCGACAAGAGATTCATCCACTCGTCAAATCTGAAAACGCATGagatgattcattcaggagagAAACCGTACGCTTGTggtcagtgcgggaagagcttcacaCTATCAGCGAGGCTTAAGGCCCACATGAgcatccacaccggagagaaaccgttctcgtgtgatcagtgcgggaaggGTTTCGGACGAAAAGCAAGCCTTACGGCACATATGAgagtccacaccggagagagtcTGTTTCTTTGTGATCGCTGCGGGAAGAGTTTTGCGCACTCGGCGAACCTTAATGACCACATGAacatccacaccggagagaaactgTACGCATGTGAGCGATGCGACAGAACGTTCTTGTGGGCTTCGGTCTTAAAGAAACACCTGAGGGTTCATACAAAGGAGAAGCCATATACTTGTCAGTTGTGTGGAAAGGGTTTTTCACAGCTAccaaatttaaaagtgcatcAGAAAAGGCATACCGGTGCGAGAGAGTACATGTGCTTTGATTGTGAAAAGACTTTTACTACATTCATGTGTTTAAAACGGCACCAGATGACTCACTccggagagaaaccttacaagtgttcacactgcGACAAGAGATTAACTGATTCAGGAGACCTGAAAAGACACGAGAGggtccacaccggagagaaaccttacGAGTGTTCACGCTGTGACAAGAGATTCAGTGATtcaggacagctgaaaagacacgagaggatccacaccggagagaaaccgtatcACTGCACCGCGTGTGGGAAGCGTTTCAATCATTTATCTTCTCTATACAATCatacaaaaaacattcacagtGAGATCTGATGCTGCATCCTCATAAAATGTGGCACTATAATGCATCAAGCAATAAAATATCATCTGGGTATCCGTCCATCCAGTAGTGACTTGACAAAGAAATATCATTAAGCATTCAAAGTGAacaaagttaattttttattgtcaaAACCAGAAGATTCAACTCAAAGATTGACCTCCGACTCAAAGAActgtcaaacatttttattattgtgcttTCTTGTCTGGCATTGCATACGTGTAGCTTGTAGTAAAAAAAGAAGCTTATTAAAACATGTTCTTGTTCAAGAAGCTGAAGAAGAGAAGCtgggttttaattttaatttgatcttcactgttgtttttttaaataactgagcTATTCGTGTATTCAGCAATCACAGATGCAAGATATACTGTCATGCAGCATTGTAATCATTTGTTTGCAATCCAAAAGCAAGACCTCTCTTTTATTTCGTCCATTCAATAttgtttttgattgattttgacTTCCAAGGATAATAAATAACAAGATGT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043226728.1 True 2168 mRNA 0.42 2 1085289 1089633

Neighbor

gene id symbol gene type direction distance location
LOC122330011 NA coding upstream 400 1078933 ~ 1084889 (+)
LOC122330262 LOC107561206,LOC107727046,LOC107679474 coding upstream 20965 1062276 ~ 1064324 (+)
LOC122332610 NA coding upstream 39431 1035252 ~ 1045858 (+)
LOC122332569 NA coding upstream 65937 1017707 ~ 1019352 (+)
LOC122330251 NA coding upstream 71646 1011311 ~ 1013643 (+)
LOC122330159 NA coding downstream 859 1090492 ~ 1102100 (+)
LOC122330518 NA coding downstream 13228 1102861 ~ 1105179 (+)
LOC122330224 NA coding downstream 64990 1154623 ~ 1157439 (+)
LOC122329844 LOC107563756,LOC107731666 coding downstream 70604 1160237 ~ 1176071 (+)
LOC122330304 LOC107561208,LOC107727047,LOC107679470 coding downstream 86599 1176232 ~ 1179341 (+)
G15833 NA non-coding upstream 15151 1069689 ~ 1070138 (+)
G15806 NA non-coding upstream 125195 959579 ~ 960094 (+)
G15803 NA non-coding upstream 129485 955507 ~ 955804 (+)
LOC122330733 NA non-coding upstream 194383 875247 ~ 890906 (+)
G15607 NA non-coding upstream 232610 850016 ~ 852679 (+)
G15882 NA non-coding downstream 25762 1115395 ~ 1115671 (+)
G15883 NA non-coding downstream 27590 1117223 ~ 1117666 (+)
G15886 NA non-coding downstream 31007 1120640 ~ 1133792 (+)
G15889 NA non-coding downstream 31707 1121340 ~ 1123300 (+)
G15887 NA non-coding downstream 40259 1129892 ~ 1131475 (+)
LOC122330066 NA other upstream 34138 1047012 ~ 1051151 (+)
LOC122330135 NA other upstream 75858 1005983 ~ 1009431 (+)
LOC122330463 NA other upstream 309755 754430 ~ 775534 (+)
LOC122330407 NA other upstream 449050 625364 ~ 636239 (+)
G15563 NA other upstream 528208 553698 ~ 557081 (+)
G15939 NA other downstream 201336 1290969 ~ 1291564 (+)
G15955 NA other downstream 301106 1390739 ~ 1392850 (+)
LOC122330032 LOC107674481,LOC107727039,LOC107711806,LOC107563760 other downstream 306214 1395847 ~ 1408926 (+)
G16003 pick1,LOC107734822,LOC106607154 other downstream 469754 1559387 ~ 1649494 (+)
G16002 pick1,LOC107734822,LOC107734770 other downstream 529679 1619312 ~ 1865229 (+)

Expression


Co-expression Network