kcnj4 (kcnj4,LOC107711802,LOC107679476,LOC107727044)


Basic Information

Item Value
gene id kcnj4
gene name kcnj4,LOC107711802,LOC107679476,LOC107727044
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056701.1
NCBI id CM032070.1
chromosome length 30200998
location 1188018 ~ 1198038 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043226742.1
GCGGGAGAACATTTGGGTTTGGACACTAAAATACTTTGacaagaggaggaagagagataCGTTCCCTCTAAGAATAGCAGAAAATCTGTGGCGCTGAAGAAAAcggaaaaacattaaaagtcgGTTATCCCACGGACAGAAGCAAAAAGCACGCATTCCCGCCGAGACAGCCCGTCAATGTCGTGAACAGGAGAGCGCGCGGCCGCATCTCGATCACGCCTGCGCTAATTTGGACGGAATTTCACTCGACATCAATCCGAAGTGAGCATAATCGCAGTGACAGGCTCAcatctctctcctcctcctcctccgttaTCCGCCGGTCACCCACATGAGCGCGAGACCgcgaggatgaggaggagagcgcgcgcgcgctcggAGATTACCGCGTGAGCGAAGTCAAAGCGAGGGATTAACCTGCGAAAACTACAAGAAAACACGAATTACACAAACACGCGTCGTGATAAAGATGGGTGTGTTCGGagaataaaaaagagagagagagagagagagagagagagaaaacaggacAAGCGGACGGAGTGCGCGCGCGACGCCAAAACACCAAATGAGCGCGAGGAGAAGAGAAAATTACGGGGAGACCGTTTGCGGATGAGATATTTGCTTTCATAAGTGTGTGACACAAAGCAGATCCAGGTGTGTCAGGATGCCGATACCCAATCTTTCCGGGTAAACGGAGAACACCGCTGTGTCGTGTCACTGAAGAAcgcagcgcacacacacacacacacacactgaagatcAAACACAGCATGGGAACCAACAGAGCCAACAGGTACAGCATCGTGTCCCCTGATGAAGAGGGCCTGAAGATCTCCACCCTCGGCCTCCACAATGGCCACGGCACCGGACGGCTCCACTCGCCCGGAGGAGAGGCGGGGCCAAGCGCGGCGTCAGCGGTGATGAGGACCAGCTACAACGGGAAGATCTCCACGTCCGGCCGCGGCCAGCTGAGGAGCCGCTTCGTCAAGAAGAACGGCCAGTGCAACGTGGTTTTCGCCAACATGGACGACAAGCCGCGGCGGTACCTGGCGGACATCTTCACGACATGCGTGGACATCCGCTGGCGCTACCTGCTGATGATCTTCTGCTCCACCTTCTTGTTCTCCTGGCTGGTGTTCGGCTTGATCTTCTACAGCGTGTCTTTAGCGCACGGGGACTTCGATAAAGATCGCGGGAGCGGCGGCAAGCCCTGGAAACCATGTCTGCTGCACGTCGAGGGCTTCGTCGGCGCCTTCCTCTTCTCGATCGAGACGCAAACCACGATCGGCTACGGCTGGCGCTGCGTAACTGAAGAGTGCCCGGTAGCGATCGTGACCGTCGTGGTGCAATCGATCGTCGGCTGCATCATTGACTCCTTCATGATCGGCACCATCATGGCCAAAATGGCGCGTCCGAAGAAGCGGAACCAAACCTTGCTGTTTTCGCACAACGCTGTGATTTCGTTGCGTGACGGGAAGCTGTGTTTAATGTGGCGCGTCGGGAACCTCCGGCGGAGTCACATCGTCGAGGCCCACGTTCGCGCGCAGCTAATCCGGCCTTACGTGACGGCGGAGGGGGAGTTCATCCCGCTGGAACAGATGGATTTAAACGTGGGTTACGACGAAGGCACGGACCGACTCTTCTTGGTGTCGCCGCTAGTCATCGTGCACGAAATCGACGAGGACTCGCCGCTTTGGGGAATGAGCCGGGCGGATCTCGAATCGGACGACTTCGAGATCGTGGTGATCCTGGAGGGGATGGTGGAGGCGACGGCGATGACCACGCAGGCGCGCAGCTCCTACCTTTCCCGCGAGATCCTCTGGGGCCACCGCTTCGAGCCGGTCATCTTCGAGGACTGCGACCGCTACCAGGTCGATTACGCGCATTTCCACAAGACCTACGAGGTTCCCTCGACGCCCGCCTGCAGCGCTAAAGAGCTGAGCGAGCTGAGCGGCCGGCGCTCGGCGGGGTCGTCCCGCTCCGTGACGCCGGACGGCCGGGCGCAGACGCTCTTGCCGCCGCACTCGCCCAGCGCCTTCTGCTACGAGAACGAGGTGGCGCTGTGCTGCGGGGAGGACGAGGACCAGCTGACCGACGCTCCCACAGACTTCCAGAAAATGTTCCAGGATTCGGCCACCATGACCTCCGGAAACAACATGCTCTGCGTGCTCGACATGGACAATCAGATCGAGTTTGACATTCTCCAGACTGCTATACCTCTCGACCCCATGACTTACAAGAGCGAGTCCGAGATATGACCGTCCCTCGAGTACACGCTTTCATTTAAATACGTTTATATAGACATTAATGTAAATGAACGCAATTTATTACACTGAggtcataaaaatgcattgatattgatttatataaacGCGTTACgtaaatattgaataatttacttaaatataaaaatagaacattaagcatataaatatttaaatgcagctataaaaacgcatttatatacaaatatgcacTGATATAagtaaacaaatgcattcagttacatgaaatgcatttaaaaatacagtcataCAACAAGTTcatgcatataaacataaaaccaTAACTAGCACAGCCATATTTGTAGCcgaaaatacattgtatgggtcaaataTCATGCCTCAAAtctttagtatattaagtaaacactgtaaatatattttaaaatatttttgattattaacatTCATTGCTACGAACTTAAATTgctattttcttaattttttcgGCACCCTctgattccagattttcaagtaTCTCAAGTACTCGCTTATATAagtgtattatataaatgttatacatCCAAATTATTTacttgcataaataaatatacttaatataagTAACACATTTATAgataaataagcatttaaataaaaaaacattgactatatttatattaataaatacttccgtctattatttatatataaataaatcgcCTTGCCTGCATTGGTTTTGTACTTTGCTCATCGCAGTCTTCCCCAAAGGAGGAAGTGGGTGTGTCCGGCCCCAAGGGACGCGTGACCCTAAAGGTCATGACCCCGTGCCGTGTCACACAAATGGTCATTGATGAGGCTCCCAGCAGAGATGAAACGCATCCTGGCTGGAGCTGACGACCGAAAATAAGAGCCATGCCAAGAAGACTGAAACAAGCGAAGCACCAAAGGAGTCGAGCTCAGGACAGACtgacctttctctctcttcatgtGGACCGTTACTGTaaatatgacacaaaaaaaCCTGTTCACGTCTTCAGGCAAAATGGATCCATGTGCTTCATTGATGTTGTTTGACGCTAAATAACAAGAGTTCACCAGGTCACAACAGTGCAATAAACTGATACGTGTGTAGATGAAACCACCGGAACTACCTTTAATAGTTAAACTATACCTGTGAGTTCAACAAAACACTTGACTTGACGTCAAATTTGAAGGGATGGAAAAAATGAAAGCTGTGAACGCTGcctgaaattaattaattaattatcgAATCTTCCCGCGTTCGAAGCAATGACGCATGCTAGTTTCTAGCGTCACGAGTTAAAACTACGGAAGCCCGTTGATGCTAGTAGGAGATCTGCGCTTGTCTCAGTCCAGAATTAGTTCCTCACAGTCAGTAACTGTTTTTTGGTAGTTTTCTCACATCtactcttttgttttgtctgtgttcCGAGGCTTCCACGCGATCATGCTAACTCAAGCCGAGATCCCGGGCTAGTTTTAGAATGACGTCGTGTGGTTTTGCGCGTTTAAAAGGGAACGAGgtttaatgtgatttatgttGACGTGTGTTTGTGGAAAAAGCACTTTCTCTGTCGGTCTGTACCGTGAACCCCGGGCAGACGGACGCGGTCGTGCAAGCTTTCGTGTATAGCCTAAACTAGTATGCTAGCAATGCTAATGTTTTCCACGTTTCCCCAGACTTTCCTCCGGCTGACTTCTGACGTGTGTAAATATAAAGCTGCTGCATGATGGGAATCTTTTACGCGTCTTCCCGTTTGAAAATCTTCCGATGGAGAAACTTTACTTGAAAGCGTCGAAAACTCCTGAAATGCACTTTATCTTGTTGTGTTGCACCTTCTCATGTGATACTGAAATAAATCTTTCTACTGCACCTCTTC

Function

symbol description
kcnj4 Is expressed in atrium and cardiac ventricle. Orthologous to human KCNJ4 (potassium inwardly rectifying channel subfamily J member 4).

NR:

description
PREDICTED: ATP-sensitive inward rectifier potassium channel 12-like

GO: NA

KEGG:

id description
K05330 KCNJN; potassium inwardly-rectifying channel subfamily J, other

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043226742.1 True 4129 mRNA 0.49 3 1188018 1198038

Neighbor

gene id symbol gene type direction distance location
LOC122330304 LOC107561208,LOC107727047,LOC107679470 coding upstream 8677 1176232 ~ 1179341 (+)
LOC122329844 LOC107563756,LOC107731666 coding upstream 11947 1160237 ~ 1176071 (+)
LOC122330224 NA coding upstream 30579 1154623 ~ 1157439 (+)
LOC122330518 NA coding upstream 82839 1102861 ~ 1105179 (+)
LOC122330159 NA coding upstream 85918 1090492 ~ 1102100 (+)
sox10 sox10,LOC107674484,LOC107711804,LOC107563722,LOC107727045,LOC107679477 coding downstream 19483 1217521 ~ 1224917 (+)
LOC122329817 LOC100537134 coding downstream 31963 1230001 ~ 1234904 (+)
LOC122332730 NA coding downstream 174494 1372532 ~ 1374290 (+)
LOC122329966 NA coding downstream 178411 1376449 ~ 1380026 (+)
LOC122330340 NA coding downstream 189446 1387484 ~ 1389699 (+)
G15911 NA non-coding upstream 34790 1152825 ~ 1153228 (+)
G15886 NA non-coding upstream 54226 1120640 ~ 1133792 (+)
G15887 NA non-coding upstream 56543 1129892 ~ 1131475 (+)
G15889 NA non-coding upstream 64718 1121340 ~ 1123300 (+)
G15883 NA non-coding upstream 70352 1117223 ~ 1117666 (+)
G15925 NA non-coding downstream 15287 1213325 ~ 1213628 (+)
G15927 NA non-coding downstream 17278 1215316 ~ 1215605 (+)
G15929 NA non-coding downstream 42308 1240346 ~ 1241047 (+)
LOC122330723 NA non-coding downstream 81225 1279263 ~ 1281171 (+)
LOC122330682 NA non-coding downstream 185210 1383248 ~ 1384894 (+)
LOC122330066 NA other upstream 136867 1047012 ~ 1051151 (+)
LOC122330135 NA other upstream 178587 1005983 ~ 1009431 (+)
LOC122330463 NA other upstream 412484 754430 ~ 775534 (+)
LOC122330407 NA other upstream 551779 625364 ~ 636239 (+)
G15563 NA other upstream 630937 553698 ~ 557081 (+)
G15939 NA other downstream 92931 1290969 ~ 1291564 (+)
G15955 NA other downstream 192701 1390739 ~ 1392850 (+)
LOC122330032 LOC107674481,LOC107727039,LOC107711806,LOC107563760 other downstream 197809 1395847 ~ 1408926 (+)
G16003 pick1,LOC107734822,LOC106607154 other downstream 361349 1559387 ~ 1649494 (+)
G16002 pick1,LOC107734822,LOC107734770 other downstream 421274 1619312 ~ 1865229 (+)

Expression


Co-expression Network