LOC122330011


Basic Information

Item Value
gene id LOC122330011
gene name NA
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056701.1
NCBI id CM032070.1
chromosome length 30200998
location 1078933 ~ 1084889 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043226788.1
AGGGCACTTTCTCTCGAGGAAGTAAAAAGTCAGGCGCTCAAACACCTGACATACTGCCAACCACTGGACTTCAGAAACCGGGCGTGGGCCAGAGcttttctatttctttcaaaagcacagttttactgtttcttGTTAAGCGTCACTGAGATCGTTGATGAAAGTGGTAACCCGTGTTGCTGTTTTCCACACCTTGTCTTTTGAGGTAGGGTTTCCGTCTAGCGCGCGACTGCGGGAAAGGATTCAGCGgaacagaaacataaaaaaactctCGTCGATCAACTTTCATAAATTCTGATTCCTCCCAACCCTACAACAGCACGTGGAACATGTTTCTCTAtgtggttttattattaatgcgcGGTGTGTCTGGAACAGAGAATGAATCTGAGCCGAAGACGGTGATtgagggagattcagtcactctaaACACTAACCTTTCCCAACTACTGAACGACGATACCATACTGTGGATGTTCGGATCCAATGACTTCCCCGTATctcaaataaagagaaagaatgaCTTTAACTCGCTTTTCCTCACTGACGATGTTAGATTCAGCAGCAGACTACACGTGGATCAAAAGACCGGATCTCTCACCATCGCAAACACCAGAACCAAACACTCAGGACAATATAAACTCACCGTCTCTAGAGAAACAACTACAACGAAGACTTTTAATGTGACTGTCATTGGCGTGCTCACTGAGACAGACGAAATAACATCACTGTCAGTATCAGTGACAGAAGGAGATCCCGTCACTCTTCCTGGCGATGCTGAAACGCACAAAAACGCTCTGATGTTGTGGAGGTTCGGAGACAAAGGAATCCTCCTAGCCAAAATCGACTCTGAAACAGGTGAAATCTCACTGAACGACGCCGACGAGAGATTCAGAGATCGCCTGCAGCTGAATCAGAACGGGTCTCTGACCATCAAGAACAGCAGAAGCGAGCACGCCGGGCTTTATGAGCTCCAGGTCAAAGGCCGCGAGAGCTCACAGCGAGTCCTTCTTTCTGTCAACGCCGTCCCAGATCCGGGTCTTTCTTCAGGGGCTAAAGCAGGAATCGCTTTTGCTGTTTTAGTTCCTGTTGTGCTGCTGGCGGCGGCAGCCCTGGCTCTGATTTACTATCGCCGCAGGATctctaaattaaaaaagcaagtGGgGACCTTGACCCGCACAAACACAAGTGAAGCTGTGGCAGGTGAAGAGAAGCAGGAGACAGCGACGGAGGGAGATCCTTTAACACTACGGACCGGtctcactgaaataaatactgACCAAATTATAAAATGGTGCTATGAAGAAAATTGCATCGCTGAAATCAATGGAGAGACCAGACTCTCATCTACATTTGACAATGCTGACAGGAGATTCATGAGCAAACTGATGCTGGATGAGAGAACTGGAGACCTCACTATCAGTAACATCAGAACCCTACACAATGGACTCTATACACTAACCATCAGAAGCAGCGGGAAGACCACACGCAAGAGATTCGTTCTCACTGTCAATGTGGTGTCCATGTCCGTGAAGGAGGGAACGTGTGCCCTGCTCCAGACCGGTGTGGAGATTCAGCCGGAGGATCTCGTGCTGTGGACATTTGGAGCCCAAAACCACCTCGTCATTAAAAGTGATTCAGGAAAGACGAGCTCCGGTAAGCGGTTTAGAGACAGACTGGATCTGAACAGGACCACTGGAGTGCTGACCATCAAAAACATCCGGCTCACAGACTCCGGACTTTTCAAACTTCAGATCATCAACAGCGAAAAGACCACCTTCAAAAGAATCGAAGTGACGGTCACTGCTGAAGGAGTGAATGAAGAAGCGACTGCAGTGATGCCGCTGTTGAATGAGGAAGTTACCGACGAATGAAACCCGCAGCACACGACGAGTCCGGTTTGAGACACGCCCACCACTGTGACATCATCCACAATCAGGCTCCACGGCATTTCTGCCTTCGGTGAAAAATGTGAGAAGCGTCGGGGAGAAGTTGCAGTGAATTCTTGTGTGATGAGCGCACGACGAAGGTTTGGACGTGTTGAGCCTCAAAGTGAACCATCTTCTGCCCAAACTGAACTGATCCGTGGTCCTGCTGGGACGAGATCTGAACTCCAGACAGTCAAGATCACGCTGAAACACTGAACAATTTGTCGCTTGAAACACTGTTTGCTTTTTACGGttaaatatctgtatttattttcttatcaaTATTCCTCTGTCAATCGAATTTGTGTTGTAAGCTATGCTTCATTAAGTCGGTCAAAGGTTAAAGTAAGTCTCCATTTCAAGgtagttttgttttatgatgatCACTGATGGTGCTGCTCGTTGTATTTGTGCTGGTCAGACtgaaaaatacaccaaaaatgTAATCAGGTCATCAATACACCATCATCATTGTCTACTGCTCTTTCCTACTTTGGTTTGACTGATTAACAACACATTTTATAGCCAACTGAGAGATCAGTTCAAACAATAATGATGGTATTCAGTCACAAGATGGAGCTAAAGCATTAGGAGAGTCATATTTGGCTGCACTCTATAAACCTGAAAGCCTAAATACACTAAACACGTTATaatcaaatgtgcattttatattttgcttggagatatttgtaatttatttacaaagttTCAGCTGTTAAAAGCTAGTTTTCCCAGAGGCTCGGTTCTGTGGTTCAGAGAGACACTGtagttataaaaaaatctgtcctttttttgttttgtttttttacaaattttcaaTAAATTGGTGCAGTTGTCCTCAGTCTCCTGAAGATGTCC
>XM_043226794.1
CGGAATCACTGGTGGATATTGAATGAACACCACTACATAGTGCACGAGATGCCTTAAGTTTCTCATGTTCGTTATTTTGGGCTGGATAGGTGGTAATTGCTGAACGAGCAGTATAGTATATTTCACATGAGGATTGACTATCTATGGTGTGTCTGGAACAGAGAATGAATCTGAGCCGAAGACGGTGATtgagggagattcagtcactctaaACACTAACCTTTCCCAACTACTGAACGACGATACCATACTGTGGATGTTCGGATCCAATGACTTCCCCGTATctcaaataaagagaaagaatgaCTTTAACTCGCTTTTCCTCACTGACGATGTTAGATTCAGCAGCAGACTACACGTGGATCAAAAGACCGGATCTCTCACCATCGCAAACACCAGAACCAAACACTCAGGACAATATAAACTCACCGTCTCTAGAGAAACAACTACAACGAAGACTTTTAATGTGACTGTCATTGGCGTGCTCACTGAGACAGACGAAATAACATCACTGTCAGTATCAGTGACAGAAGGAGATCCCGTCACTCTTCCTGGCGATGCTGAAACGCACAAAAACGCTCTGATGTTGTGGAGGTTCGGAGACAAAGGAATCCTCCTAGCCAAAATCGACTCTGAAACAGGTGAAATCTCACTGAACGACGCCGACGAGAGATTCAGAGATCGCCTGCAGCTGAATCAGAACGGGTCTCTGACCATCAAGAACAGCAGAAGCGAGCACGCCGGGCTTTATGAGCTCCAGGTCAAAGGCCGCGAGAGCTCACAGCGAGTCCTTCTTTCTGTCAACGCCGTCCCAGATCCGGGTCTTTCTTCAGGGGCTAAAGCAGGAATCGCTTTTGCTGTTTTAGTTCCTGTTGTGCTGCTGGCGGCGGCAGCCCTGGCTCTGATTTACTATCGCCGCAGGATctctaaattaaaaaagcaagtGGgGACCTTGACCCGCACAAACACAAGTGAAGCTGTGGCAGGTGAAGAGAAGCAGGAGACAGCGACGGAGGGAGATCCTTTAACACTACGGACCGGtctcactgaaataaatactgACCAAATTATAAAATGGTGCTATGAAGAAAATTGCATCGCTGAAATCAATGGAGAGACCAGACTCTCATCTACATTTGACAATGCTGACAGGAGATTCATGAGCAAACTGATGCTGGATGAGAGAACTGGAGACCTCACTATCAGTAACATCAGAACCCTACACAATGGACTCTATACACTAACCATCAGAAGCAGCGGGAAGACCACACGCAAGAGATTCGTTCTCACTGTCAATGTGGTGTCCATGTCCGTGAAGGAGGGAACGTGTGCCCTGCTCCAGACCGGTGTGGAGATTCAGCCGGAGGATCTCGTGCTGTGGACATTTGGAGCCCAAAACCACCTCGTCATTAAAAGTGATTCAGGAAAGACGAGCTCCGGTAAGCGGTTTAGAGACAGACTGGATCTGAACAGGACCACTGGAGTGCTGACCATCAAAAACATCCGGCTCACAGACTCCGGACTTTTCAAACTTCAGATCATCAACAGCGAAAAGACCACCTTCAAAAGAATCGAAGTGACGGTCACTGCTGAAGGAGTGAATGAAGAAGCGACTGCAGTGATGCCGCTGTTGAATGAGGAAGTTACCGACGAATGAAACCCGCAGCACACGACGAGTCCGGTTTGAGACACGCCCACCACTGTGACATCATCCACAATCAGGCTCCACGGCATTTCTGCCTTCGGTGAAAAATGTGAGAAGCGTCGGGGAGAAGTTGCAGTGAATTCTTGTGTGATGAGCGCACGACGAAGGTTTGGACGTGTTGAGCCTCAAAGTGAACCATCTTCTGCCCAAACTGAACTGATCCGTGGTCCTGCTGGGACGAGATCTGAACTCCAGACAGTCAAGATCACGCTGAAACACTGAACAATTTGTCGCTTGAAACACTGTTTGCTTTTTACGGttaaatatctgtatttattttcttatcaaTATTCCTCTGTCAATCGAATTTGTGTTGTAAGCTATGCTTCATTAAGTCGGTCAAAGGTTAAAGTAAGTCTCCATTTCAAGgtagttttgttttatgatgatCACTGATGGTGCTGCTCGTTGTATTTGTGCTGGTCAGACtgaaaaatacaccaaaaatgTAATCAGGTCATCAATACACCATCATCATTGTCTACTGCTCTTTCCTACTTTGGTTTGACTGATTAACAACACATTTTATAGCCAACTGAGAGATCAGTTCAAACAATAATGATGGTATTCAGTCACAAGATGGAGCTAAAGCATTAGGAGAGTCATATTTGGCTGCACTCTATAAACCTGAAAGCCTAAATACACTAAACACGTTATaatcaaatgtgcattttatattttgcttggagatatttgtaatttatttacaaagttTCAGCTGTTAAAAGCTAGTTTTCCCAGAGGCTCGGTTCTGTGGTTCAGAGAGACACTGtagttataaaaaaatctgtcctttttttgttttgtttttttacaaattttcaaTAAATTGGTGCAGTTGTCCTCAGTCTCCTGAAGATGTCC
>XM_043226802.1
ACTACATAGTGCACGAGATGCCTTAAGTTTCTCATGTTCGTTATTTTGGGCTGGATAGGTGGTAATTGCTGAACGAGCAGTATAGTATATTTCACATGAGGATTGACTATCTATGGAAGCATGTGGTGATTTCTAGCCCTTTAACGGCCTATGTGGGTAATCAGATAAACGTTGAAAAGGTGTGTCTGGAACAGAGAATGAATCTGAGCCGAAGACGGTGATtgagggagattcagtcactctaaACACTAACCTTTCCCAACTACTGAACGACGATACCATACTGTGGATGTTCGGATCCAATGACTTCCCCGTATctcaaataaagagaaagaatgaCTTTAACTCGCTTTTCCTCACTGACGATGTTAGATTCAGCAGCAGACTACACGTGGATCAAAAGACCGGATCTCTCACCATCGCAAACACCAGAACCAAACACTCAGGACAATATAAACTCACCGTCTCTAGAGAAACAACTACAACGAAGACTTTTAATGTGACTGTCATTGGCGTGCTCACTGAGACAGACGAAATAACATCACTGTCAGTATCAGTGACAGAAGGAGATCCCGTCACTCTTCCTGGCGATGCTGAAACGCACAAAAACGCTCTGATGTTGTGGAGGTTCGGAGACAAAGGAATCCTCCTAGCCAAAATCGACTCTGAAACAGGTGAAATCTCACTGAACGACGCCGACGAGAGATTCAGAGATCGCCTGCAGCTGAATCAGAACGGGTCTCTGACCATCAAGAACAGCAGAAGCGAGCACGCCGGGCTTTATGAGCTCCAGGTCAAAGGCCGCGAGAGCTCACAGCGAGTCCTTCTTTCTGTCAACGCCGTCCCAGATCCGGGTCTTTCTTCAGGGGCTAAAGCAGGAATCGCTTTTGCTGTTTTAGTTCCTGTTGTGCTGCTGGCGGCGGCAGCCCTGGCTCTGATTTACTATCGCCGCAGGATctctaaattaaaaaagcaagtGGgGACCTTGACCCGCACAAACACAAGTGAAGCTGTGGCAGGTGAAGAGAAGCAGGAGACAGCGACGGAGGGAGATCCTTTAACACTACGGACCGGtctcactgaaataaatactgACCAAATTATAAAATGGTGCTATGAAGAAAATTGCATCGCTGAAATCAATGGAGAGACCAGACTCTCATCTACATTTGACAATGCTGACAGGAGATTCATGAGCAAACTGATGCTGGATGAGAGAACTGGAGACCTCACTATCAGTAACATCAGAACCCTACACAATGGACTCTATACACTAACCATCAGAAGCAGCGGGAAGACCACACGCAAGAGATTCGTTCTCACTGTCAATGTGGTGTCCATGTCCGTGAAGGAGGGAACGTGTGCCCTGCTCCAGACCGGTGTGGAGATTCAGCCGGAGGATCTCGTGCTGTGGACATTTGGAGCCCAAAACCACCTCGTCATTAAAAGTGATTCAGGAAAGACGAGCTCCGGTAAGCGGTTTAGAGACAGACTGGATCTGAACAGGACCACTGGAGTGCTGACCATCAAAAACATCCGGCTCACAGACTCCGGACTTTTCAAACTTCAGATCATCAACAGCGAAAAGACCACCTTCAAAAGAATCGAAGTGACGGTCACTGCTGAAGGAGTGAATGAAGAAGCGACTGCAGTGATGCCGCTGTTGAATGAGGAAGTTACCGACGAATGAAACCCGCAGCACACGACGAGTCCGGTTTGAGACACGCCCACCACTGTGACATCATCCACAATCAGGCTCCACGGCATTTCTGCCTTCGGTGAAAAATGTGAGAAGCGTCGGGGAGAAGTTGCAGTGAATTCTTGTGTGATGAGCGCACGACGAAGGTTTGGACGTGTTGAGCCTCAAAGTGAACCATCTTCTGCCCAAACTGAACTGATCCGTGGTCCTGCTGGGACGAGATCTGAACTCCAGACAGTCAAGATCACGCTGAAACACTGAACAATTTGTCGCTTGAAACACTGTTTGCTTTTTACGGttaaatatctgtatttattttcttatcaaTATTCCTCTGTCAATCGAATTTGTGTTGTAAGCTATGCTTCATTAAGTCGGTCAAAGGTTAAAGTAAGTCTCCATTTCAAGgtagttttgttttatgatgatCACTGATGGTGCTGCTCGTTGTATTTGTGCTGGTCAGACtgaaaaatacaccaaaaatgTAATCAGGTCATCAATACACCATCATCATTGTCTACTGCTCTTTCCTACTTTGGTTTGACTGATTAACAACACATTTTATAGCCAACTGAGAGATCAGTTCAAACAATAATGATGGTATTCAGTCACAAGATGGAGCTAAAGCATTAGGAGAGTCATATTTGGCTGCACTCTATAAACCTGAAAGCCTAAATACACTAAACACGTTATaatcaaatgtgcattttatattttgcttggagatatttgtaatttatttacaaagttTCAGCTGTTAAAAGCTAGTTTTCCCAGAGGCTCGGTTCTGTGGTTCAGAGAGACACTGtagttataaaaaaatctgtcctttttttgttttgtttttttacaaattttcaaTAAATTGGTGCAGTTGTCCTCAGTCTCCTGAAGATGTCC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043226788.1 True 2786 mRNA 0.45 7 1078933 1084889
XM_043226794.1 False 2569 mRNA 0.45 7 1079784 1084889
XM_043226802.1 False 2602 mRNA 0.45 8 1079815 1084889

Neighbor

gene id symbol gene type direction distance location
LOC122330262 LOC107561206,LOC107727046,LOC107679474 coding upstream 14609 1062276 ~ 1064324 (+)
LOC122332610 NA coding upstream 33075 1035252 ~ 1045858 (+)
LOC122332569 NA coding upstream 59581 1017707 ~ 1019352 (+)
LOC122330251 NA coding upstream 65290 1011311 ~ 1013643 (+)
LOC122330100 NA coding upstream 232488 844603 ~ 846445 (+)
LOC122329984 NA coding downstream 400 1085289 ~ 1089633 (+)
LOC122330159 NA coding downstream 5603 1090492 ~ 1102100 (+)
LOC122330518 NA coding downstream 17972 1102861 ~ 1105179 (+)
LOC122330224 NA coding downstream 69734 1154623 ~ 1157439 (+)
LOC122329844 LOC107563756,LOC107731666 coding downstream 75348 1160237 ~ 1176071 (+)
G15833 NA non-coding upstream 8795 1069689 ~ 1070138 (+)
G15806 NA non-coding upstream 118839 959579 ~ 960094 (+)
G15803 NA non-coding upstream 123129 955507 ~ 955804 (+)
LOC122330733 NA non-coding upstream 188027 875247 ~ 890906 (+)
G15607 NA non-coding upstream 226254 850016 ~ 852679 (+)
G15882 NA non-coding downstream 30506 1115395 ~ 1115671 (+)
G15883 NA non-coding downstream 32334 1117223 ~ 1117666 (+)
G15886 NA non-coding downstream 35751 1120640 ~ 1133792 (+)
G15889 NA non-coding downstream 36451 1121340 ~ 1123300 (+)
G15887 NA non-coding downstream 45003 1129892 ~ 1131475 (+)
LOC122330066 NA other upstream 27782 1047012 ~ 1051151 (+)
LOC122330135 NA other upstream 69502 1005983 ~ 1009431 (+)
LOC122330463 NA other upstream 303399 754430 ~ 775534 (+)
LOC122330407 NA other upstream 442694 625364 ~ 636239 (+)
G15563 NA other upstream 521852 553698 ~ 557081 (+)
G15939 NA other downstream 206080 1290969 ~ 1291564 (+)
G15955 NA other downstream 305850 1390739 ~ 1392850 (+)
LOC122330032 LOC107674481,LOC107727039,LOC107711806,LOC107563760 other downstream 310958 1395847 ~ 1408926 (+)
G16003 pick1,LOC107734822,LOC106607154 other downstream 474498 1559387 ~ 1649494 (+)
G16002 pick1,LOC107734822,LOC107734770 other downstream 534423 1619312 ~ 1865229 (+)

Expression


Co-expression Network