LOC122330262 (LOC107561206,LOC107727046,LOC107679474)


Basic Information

Item Value
gene id LOC122330262
gene name LOC107561206,LOC107727046,LOC107679474
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056701.1
NCBI id CM032070.1
chromosome length 30200998
location 1062276 ~ 1064324 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043227149.1
AGTGGGCATTTCCCATCACGTGACATGTACTTTTTCGTTCAGCTTCCGAAGGCTCGCCGTTATCTGAATGCTACTGTAAGTTACACAAACTCTGAAGGATGTCGGCTTCGTGTACCACAGCAGAGGCAAAAGATCCTGACGATATTCAAACGAGGAAAAGAAGAGGGAGTTTTGATTTTAAGCCTCCAAATATGTCCACGATGAGGATGGTGCTCGTAGGAAAGACCGGAGCTGGTAAAAGCTCTTCAGGAAACACCATCCTGGGAAGAAAAGCTTTCAGAGCCGCCCAAAGTGCTTCATCTGTTACTAAAGAGTGCTCGAAAGCGACTGGAGAGGTGGCTGACCGTCAGCTGATGCTGGTAGACTGTCCAGGGATCTTTGACACTTCGCTTTCAGAGAAAGAACTCATCAAGGAGATGAGCAAATGTATAAACATGACGGCACCAGGACCTCACGTGATAGTCCTGGTCATCCAGCCTGGACCGTTCACTAAAGAAGAGAGACTCTCTGTGGAGAAGATCAGAGCTGTATTTGGGGAAgaagcagacagacacacaatcATCCTCTTCACTCACGGCGATCAAATCTCAGAAAGCTTCGAGCAAACACTGAGCGAAGCACGGCATGATTTAAAGCATCTCGTCGAGTTATGTGGCGGACGATATCATGTGTTGGACAACACAAAGGTTCATGATCGCAAGCAGGTTTTGGAGTTTCTGGATAAGGTTGATAACATGTTGCACACGAACGAGGACAAATATTACACCAGTGACATGTTTCGACGCGTGGAAGAAATGCTTCGAGACAAAGAAGAGGGGCTCAGAAAAGAGTACAGCCAGACGATACAGGAATTAACAGACGCATTTCACGAGGAGAAGACCCAACTTGAGAAGACCATCGAGCAACTGAAAAAATCTGGGCGGGAAAAGGaccagaaaattaaaaagttgaaaGAGCAACTGAAAAAGGAGGACACGCATTTTAAAGAGGTTAAGCGTTTTTATGAGCAGAAGCACAGAGCTGTGAGAGAGGAGGTGGAAGAGACACAAGTCGACGAAAACATCCCAGAGATCAGAAGACAACTACAAAAGCTTCGTATCTGAGATGCTGTTGAGAGTTCACTGACTAACTGATTGATAATCAATACGATCCTTTTTTTTGCTATACGTTTTAATATAGCATTAGTTTAATCAACGGGCTCTCTTGAATGTGGCCCTGCTCATGTTTGTGTTCTGACCGTGGTAAAAACCGCTTAAGAccttttaaatgccatttttgatACAACTAAATAACATCAAACTATAAAACACtgcaactaattattatttagcaaCATGTTCCACCGAAATTTTACGTTAAGTCCATTTCTaactaattctttttttaattggctcAACCCTCAGTGAACTTGTTTTCTAGTCaactaaaattttttttatgtatagtGCTGTTGTCACgtatctgttgttgttttcatgtcccATGTGCTCCGTGACCTGctttctgttaattgtatcattgtgttcaggtgtttttAGTTCATTGTCATTTGTGTATATAGTTCCTGTTCATTTCAGGTGGTTttatgtgtggtttttgttacctgcctgtctgcctgtagTAGTACTATTTAGTCCTTGGTCTATGATTAAACTTATTAAGAGTA

Function

NR:

description
PREDICTED: GTPase IMAP family member 7-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043227149.1 True 1666 mRNA 0.42 3 1062276 1064324

Neighbor

gene id symbol gene type direction distance location
LOC122332610 NA coding upstream 16418 1035252 ~ 1045858 (+)
LOC122332569 NA coding upstream 42924 1017707 ~ 1019352 (+)
LOC122330251 NA coding upstream 48633 1011311 ~ 1013643 (+)
LOC122330100 NA coding upstream 215831 844603 ~ 846445 (+)
LOC122332312 NA coding upstream 269608 783410 ~ 792668 (+)
LOC122330011 NA coding downstream 14609 1078933 ~ 1084889 (+)
LOC122329984 NA coding downstream 20965 1085289 ~ 1089633 (+)
LOC122330159 NA coding downstream 26168 1090492 ~ 1102100 (+)
LOC122330518 NA coding downstream 38537 1102861 ~ 1105179 (+)
LOC122330224 NA coding downstream 90299 1154623 ~ 1157439 (+)
G15806 NA non-coding upstream 102182 959579 ~ 960094 (+)
G15803 NA non-coding upstream 106472 955507 ~ 955804 (+)
LOC122330733 NA non-coding upstream 171370 875247 ~ 890906 (+)
G15607 NA non-coding upstream 209597 850016 ~ 852679 (+)
LOC122330703 NA non-coding upstream 212567 847287 ~ 849709 (+)
G15833 NA non-coding downstream 5365 1069689 ~ 1070138 (+)
G15882 NA non-coding downstream 51071 1115395 ~ 1115671 (+)
G15883 NA non-coding downstream 52899 1117223 ~ 1117666 (+)
G15886 NA non-coding downstream 56316 1120640 ~ 1133792 (+)
G15889 NA non-coding downstream 57016 1121340 ~ 1123300 (+)
LOC122330066 NA other upstream 11125 1047012 ~ 1051151 (+)
LOC122330135 NA other upstream 52845 1005983 ~ 1009431 (+)
LOC122330463 NA other upstream 286742 754430 ~ 775534 (+)
LOC122330407 NA other upstream 426037 625364 ~ 636239 (+)
G15563 NA other upstream 505195 553698 ~ 557081 (+)
G15939 NA other downstream 226645 1290969 ~ 1291564 (+)
G15955 NA other downstream 326415 1390739 ~ 1392850 (+)
LOC122330032 LOC107674481,LOC107727039,LOC107711806,LOC107563760 other downstream 331523 1395847 ~ 1408926 (+)
G16003 pick1,LOC107734822,LOC106607154 other downstream 495063 1559387 ~ 1649494 (+)
G16002 pick1,LOC107734822,LOC107734770 other downstream 554988 1619312 ~ 1865229 (+)

Expression


Co-expression Network