LOC122330340


Basic Information

Item Value
gene id LOC122330340
gene name NA
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056701.1
NCBI id CM032070.1
chromosome length 30200998
location 1387484 ~ 1389699 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043227278.1
TAGGAGCAGGTTGTTAGTCTCTGGATGTCGCTATTTAACTGATCCCTAGTTTCGGGGAGAAAGGGCTGTATCggatgactttcttttttccgCGTTTGAGTAAAAGATCGTCTTCCTTCTAGATCTCACCTGTCTGCCGTGCATCATGTCGTCCTCAAGCGACACGACAAAGAGAAGAGgtaGTGATGGAAGCATTGCTTCAAATACTCCAGATTTGTCTATGAGAAGATTCGTGTTGGTCGGATTGACTGGAGCAGGTAAAAGCTCCTCTGGAAACACCATCCTGGGCAGAAAAGCCTTCAGGGTAGCGAAAAGTGCTTCCTCTGTAACCAAAGAGTGCTCGAAAGAGACGGAAAACGTGGCTGGCAGAGAGATAACCGTAGTAGATACGCCTGGTATGTTCGACACCAGTGTTTCAGAGGAGGATCTTCTCAAACAGAAGATCGGTAAATGTATAACCATGACCACACCGGGACCTCACGCCATCATCCTGGTCATTCAGCTGGCCCTCTTCagtgaagaagagaaagagtCAGTCAAGATGATCCGAGCTATATTTGGAGAAGAAGCAGATAAACACACATTCGTCCTCTTCACTCACGGCGATCGGGTGACCCCCGCTGATATCGAGGGAGGTGGTGAACACCTGAATGAAATCTTGAGTCTCTATAAGCGACGTTATCACGTCTTCGATAATGAAAACATGCAGGATCGCGATCAAGTTGTAGAGTTTCTGGAGAAGGTGGACGACATGATCGCTGCCAACGGAGGTCAATATTTCACCAACGACGCTTACAAGGACTTGGAGGACATGCTGACAACCAAAGAAAACAGACTGAGGGAGGAATTTAGCGTGAAATTACAAAGCTTACAGAGCGACCTGGAGTCAAGGTTCgctgaagagaagaagaagcagGACGACAGGATGAACGAGTTCAAGAGGTATTATAACGCAAGGCTCCGAGAGATCAGACAGGAGGCTCAGCAGAAACATGTTCACGACAGTAAAGTGAAGACGATTGTGGACAAGAtcattgacaaaataataaataaatgacacgcATTTACAAAGCAAACCGGTTAATTAATAACagtattattcaaatctgttttgtaccttctGACATCCACCATAATAATCATGATAATCCTTAAAcactgcattaaacattaacataaagTCCAAGTGTacataactaattaaaaacaactaaatataatcAAGTGTCAGGCAGGGAATGCTGGGAACATCGGTTTACAGGTTGACTGTAAATTATGCATCAGttgcttttgtttgcttttaaaaactgtccaataacagcattttacagtaaaatgacaTGAAAGGTCTGGTTAGATCTTTGGGTTTTCTCTTGTATATAGTACGGGAACGTACTGTTTTTACAGTTCCACTTCTTTTAGTTACAGTTGCGCATTTCCACATCATTCCAGTTTAACGTGTATAAGGCTTACAGAGTGTACAATATTGCttgaaaataaacttttaccGTAAATTTAA

Function

GO:

id name namespace
GO:0006950 response to stress biological_process

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043227278.1 True 1519 mRNA 0.42 3 1387484 1389699

Neighbor

gene id symbol gene type direction distance location
LOC122329966 NA coding upstream 7458 1376449 ~ 1380026 (+)
LOC122332730 NA coding upstream 13194 1372532 ~ 1374290 (+)
LOC122329817 LOC100537134 coding upstream 152580 1230001 ~ 1234904 (+)
sox10 sox10,LOC107674484,LOC107711804,LOC107563722,LOC107727045,LOC107679477 coding upstream 162567 1217521 ~ 1224917 (+)
kcnj4 kcnj4,LOC107711802,LOC107679476,LOC107727044 coding upstream 189446 1188018 ~ 1198038 (+)
LOC122330593 polr2f,LOC107727050 coding downstream 25918 1415617 ~ 1418312 (+)
LOC122330185 micall1,LOC107727039,LOC107674481,LOC107711806,LOC107563760 coding downstream 60539 1450238 ~ 1453084 (+)
LOC122329871 NA coding downstream 67251 1456950 ~ 1463253 (+)
LOC122329679 NA coding downstream 118794 1508493 ~ 1516411 (+)
LOC122329687 NA coding downstream 127809 1517508 ~ 1525476 (+)
LOC122330682 NA non-coding upstream 2590 1383248 ~ 1384894 (+)
LOC122330723 NA non-coding upstream 106313 1279263 ~ 1281171 (+)
G15929 NA non-coding upstream 146437 1240346 ~ 1241047 (+)
G15927 NA non-coding upstream 171879 1215316 ~ 1215605 (+)
G15925 NA non-coding upstream 173856 1213325 ~ 1213628 (+)
G15967 NA non-coding downstream 24516 1414215 ~ 1415199 (+)
G15972 NA non-coding downstream 51560 1441259 ~ 1441742 (+)
G15944 NA non-coding downstream 95872 1485571 ~ 1490779 (+)
G16004 NA non-coding downstream 225461 1615160 ~ 1615529 (+)
G16008 NA non-coding downstream 299343 1689042 ~ 1704676 (+)
G15939 NA other upstream 95920 1290969 ~ 1291564 (+)
LOC122330066 NA other upstream 336333 1047012 ~ 1051151 (+)
LOC122330135 NA other upstream 378053 1005983 ~ 1009431 (+)
LOC122330463 NA other upstream 611950 754430 ~ 775534 (+)
LOC122330407 NA other upstream 751245 625364 ~ 636239 (+)
G15955 NA other downstream 1040 1390739 ~ 1392850 (+)
LOC122330032 LOC107674481,LOC107727039,LOC107711806,LOC107563760 other downstream 6148 1395847 ~ 1408926 (+)
G16003 pick1,LOC107734822,LOC106607154 other downstream 169688 1559387 ~ 1649494 (+)
G16002 pick1,LOC107734822,LOC107734770 other downstream 229613 1619312 ~ 1865229 (+)
trnar-ccu plbd1,LOC107563730 other downstream 231224 1620923 ~ 1623394 (+)

Expression


Co-expression Network