LOC122330397



Basic Information


Item Value
gene id LOC122330397
gene name NA
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information


Item Value
chromosome id NC_056701.1
NCBI id CM032070.1
chromosome length 30200998
location 743953 ~ 753713 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence


>XM_043227358.1
TACAGGTTTAATAGTCCTTCATTTCACCAGATCACTTTCACTTTGACGAGGCAGAGATGATCGTAACTTCAGCTGAACATGGATCTGCTTATGATCATTTTAGTGACTGTGATTCCAGTATTATCAGATGGGTTGACTGTGCATGGTCCGTCTGGTCCTGTGGTTGCTCCTCTGGGATCTTCAGTGGTTCTTCTCTGTTCTGTTGATGAATCTTTACCAATAAAGGATCTGGAGGTGGAGTGGAAGAGAACACACTCAGAGACTTTAGTTCATCTGTATCAGGACGGAGAGAGTCGAGCAGAAGCCCAGCAGCAGGATTATCAGGACAGAGCTCATTTCTTCACTGATCAGATTCAACATGGAAACTTCTCTCTCCGTCTGGATGATCTGAGATCTGAAGGAGGACAGTACACATGTACAGTTCACGGTCAGCGGGAGTCTGGAGAAACTATGGTTGAAATAAAGGTTGATGTTGagcgTTTGAGAGTGTCAGGATCGAGTCGCTCTGTATCAGTGTCTGTGGGTGAAGACGTCACTCTGAACTGCTTTGTTGACTCTAACATCACACTTCAAGACATTGAAGAGGTTTCATGGAGGAAAACAGATGAGGATATTATGGTTCTGCTCTACCAAGAGCATACGGCTTTACCAGAGGCATCAAACGAGCGATACAGAGACAGGGTTGAGTTCTTCAGTGATGAAATCTCCAAATTAAACTTCTCTCTCAGACTGAAGAGTGTCAGAACTGAAGATAAAGGAGTTTATATGTGTGAGGTGTTAGCTGGAGGACTTTCAGGCAATACTACTGTAGAACTACAGAGACTGGGGTTATCAGTTTTACATACTGGTGTTGAttctctgtgtttctgcatCTGGGTCTGCTCTTCTGCTTGTCTGCCTCATCTACTGCAGATCATCTACTAAAGGTTTCATTGTACAGAATCTTTCTAACCGTGATGTTCATCTGGGAGGTTCAGCACTTTTGGCCTGTCATGTTCCTCCACACTTAGTAACTGCAGATCTTAAGGTGGAGTGGAGAAGAAGAAACTCACAGACTCTGGTTCATCT

Function


GO:

id name namespace
GO:0004175 endopeptidase activity molecular_function
GO:0004197 cysteine-type endopeptidase activity molecular_function
GO:0008233 peptidase activity molecular_function
GO:0008234 cysteine-type peptidase activity molecular_function

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
XM_043227358.1 True 1068 mRNA 0.44 6 743953 753713
Loading

Neighbor


gene id symbol gene type direction distance location
LOC122329668 NA coding upstream 32552 699715 ~ 711401 (+)
LOC122332267 NA coding upstream 104654 638828 ~ 639299 (+)
LOC122329695 LOC107574151,LOC107661760,LOC107705958,LOC107574149,LOC107712638,LOC107575271 coding upstream 133592 571938 ~ 610361 (+)
LOC122332242 NA coding upstream 172000 569324 ~ 571953 (+)
LOC122331907 NA coding upstream 291079 450471 ~ 452874 (+)
LOC122332312 NA coding downstream 29697 783410 ~ 792668 (+)
LOC122330100 NA coding downstream 90890 844603 ~ 846445 (+)
LOC122330251 NA coding downstream 257598 1011311 ~ 1013643 (+)
LOC122332569 NA coding downstream 263994 1017707 ~ 1019352 (+)
LOC122332610 NA coding downstream 281539 1035252 ~ 1045858 (+)
LOC122330711 NA non-coding upstream 46244 695751 ~ 697709 (+)
G15586 NA non-coding upstream 65858 677066 ~ 678095 (+)
G15550 si:ch211-108d22.2 non-coding upstream 221281 520750 ~ 522672 (+)
G15546 NA non-coding upstream 263653 478439 ~ 480300 (+)
LOC122330779 NA non-coding upstream 287287 454766 ~ 456666 (+)
LOC122330767 NA non-coding downstream 28270 781983 ~ 783076 (+)
LOC122330666 NA non-coding downstream 39537 793250 ~ 815075 (+)
G15592 NA non-coding downstream 63776 817489 ~ 893665 (+)
G15601 LOC107574600 non-coding downstream 78546 832259 ~ 837762 (+)
LOC122330703 NA non-coding downstream 93574 847287 ~ 849709 (+)
LOC122330407 NA other upstream 107714 625364 ~ 636239 (+)
G15563 NA other upstream 186872 553698 ~ 557081 (+)
LOC122331567 NA other upstream 434044 73544 ~ 309909 (+)
LOC122330774 NA other upstream 444632 55175 ~ 299321 (+)
LOC122330463 NA other downstream 717 754430 ~ 775534 (+)
LOC122330135 NA other downstream 252270 1005983 ~ 1009431 (+)
LOC122330066 NA other downstream 293299 1047012 ~ 1051151 (+)
G15939 NA other downstream 537256 1290969 ~ 1291564 (+)
G15955 NA other downstream 637026 1390739 ~ 1392850 (+)

Expression


LOC122330397 Expression in all Baseline Samples

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The chart has 1 Y axis displaying values. Range: 0 to 50.
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LOC122330397 Expression in each Bioproject

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LOC122330397 Expression in each Sample
The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying Expression. Range: 0 to 250.
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Co-expression Network