LOC122330518


Basic Information

Item Value
gene id LOC122330518
gene name NA
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056701.1
NCBI id CM032070.1
chromosome length 30200998
location 1102861 ~ 1105179 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043227606.1
CCGCGGTCTCCTGTTTTGTCTTGATGCTGGGTTAACACGAACTCTAAGAAATGTAGCAGAAACATACAGTTAAATACAAACCTGTAATATTCTCCTTTTCACAGTCAAGACTAGGTTTTGAAGCAGTATCTTTACTGGGATCTGCTCCTGTGAAGATGAGGTTTGTTAAAGAGGAGATTGAAGAGAAAACGAGTGAACCAGAaacatggagaataaaacacGAGGAAAGAGAAGagttgattgaagaaaaacagaatgacGAATCAAGTGAAGTTGAAGAGAAAAACCGCATCAAAACTTTCAATAGGCCTCagatcaaaaagaaaagaagagccAAGACCTCTTTCACCTGcactcagtgtggaaagagtttcaagCGCAAAACAAGTCTTGATTGtcacatgagagttcacaccggagagaaaccgttcacttgtgatcagtgcgggaagtgcttcacacacaaaacaagtcTCGAACGTCACATGAGAATTCATACTGGAGAAAAGCCGTTTACTTGTGAccagtgtgggaagagtttcacgCACAAATCGAGTATTGAGCATCACATAAGAGTTCGCGCTGGAGAGAGTCCGTTCTCCTGGGACAAATGTTGGAAGAGTTTCACGCACGTACTTGTGATCAATGCGGGAAGCCTTTTTCATGCAAAGCAAGTCTTGATCGTCACATGAGACGTCATACTGGAGAAAAGCCGTTTACttgtgatcagtgcgggaagagttttgCAAAATCAGCTAACCTTAAAATACACATGAACATGCACACTAGAGAGAAGCACAAATGTGATCGGTGTGGTAAAACGTTTCTATGGGC

Function

GO:

id name namespace
GO:0044451 obsolete nucleoplasm part cellular_component
GO:0016592 mediator complex cellular_component

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043227606.1 True 834 mRNA 0.42 2 1102861 1105179

Neighbor

gene id symbol gene type direction distance location
LOC122330159 NA coding upstream 761 1090492 ~ 1102100 (+)
LOC122329984 NA coding upstream 13228 1085289 ~ 1089633 (+)
LOC122330011 NA coding upstream 17972 1078933 ~ 1084889 (+)
LOC122330262 LOC107561206,LOC107727046,LOC107679474 coding upstream 38537 1062276 ~ 1064324 (+)
LOC122332610 NA coding upstream 57003 1035252 ~ 1045858 (+)
LOC122330224 NA coding downstream 49444 1154623 ~ 1157439 (+)
LOC122329844 LOC107563756,LOC107731666 coding downstream 55058 1160237 ~ 1176071 (+)
LOC122330304 LOC107561208,LOC107727047,LOC107679470 coding downstream 71053 1176232 ~ 1179341 (+)
kcnj4 kcnj4,LOC107711802,LOC107679476,LOC107727044 coding downstream 82839 1188018 ~ 1198038 (+)
sox10 sox10,LOC107674484,LOC107711804,LOC107563722,LOC107727045,LOC107679477 coding downstream 112342 1217521 ~ 1224917 (+)
G15833 NA non-coding upstream 32723 1069689 ~ 1070138 (+)
G15806 NA non-coding upstream 142767 959579 ~ 960094 (+)
G15803 NA non-coding upstream 147057 955507 ~ 955804 (+)
LOC122330733 NA non-coding upstream 211955 875247 ~ 890906 (+)
G15607 NA non-coding upstream 250182 850016 ~ 852679 (+)
G15882 NA non-coding downstream 10216 1115395 ~ 1115671 (+)
G15883 NA non-coding downstream 12044 1117223 ~ 1117666 (+)
G15886 NA non-coding downstream 15461 1120640 ~ 1133792 (+)
G15889 NA non-coding downstream 16161 1121340 ~ 1123300 (+)
G15887 NA non-coding downstream 24713 1129892 ~ 1131475 (+)
LOC122330066 NA other upstream 51710 1047012 ~ 1051151 (+)
LOC122330135 NA other upstream 93430 1005983 ~ 1009431 (+)
LOC122330463 NA other upstream 327327 754430 ~ 775534 (+)
LOC122330407 NA other upstream 466622 625364 ~ 636239 (+)
G15563 NA other upstream 545780 553698 ~ 557081 (+)
G15939 NA other downstream 185790 1290969 ~ 1291564 (+)
G15955 NA other downstream 285560 1390739 ~ 1392850 (+)
LOC122330032 LOC107674481,LOC107727039,LOC107711806,LOC107563760 other downstream 290668 1395847 ~ 1408926 (+)
G16003 pick1,LOC107734822,LOC106607154 other downstream 454208 1559387 ~ 1649494 (+)
G16002 pick1,LOC107734822,LOC107734770 other downstream 514133 1619312 ~ 1865229 (+)

Expression


Co-expression Network