LOC122330554


Basic Information

Item Value
gene id LOC122330554
gene name NA
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056701.1
NCBI id CM032070.1
chromosome length 30200998
location 1660521 ~ 1663598 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043227680.1
ACAtgtggttaaaaataaagttcagtTTCCTTCTGTTTCACTCTTTGTCTCTCTAGAGATTCGATCAGTGATTCATTCTCTCCGACATCACGAATGAAGAAGTGAAACAGCGCTGTGTTTCTCTCGCTTACCGTGATCTCTCCATCTCTGCCTTTGTTCTCATCGGTTTTATCAGCAGTGATGAACAGGAGGCCGTGTTCTTCTGGATATAAATGGGACTCTCTGATCAAGTTTTGCGTCTCCCAAAGTTCTGGTCCACTGACGCCAGCAGCGGTTTCTCCGCCGGTCCCGAAGCCGGTGATGAGCAACAGAGATCAGCCAGAGTCCTGGTCCTCCATCAGCCCCAGCACGTGGATCTGTGTGGGAATGGTCACGAGCAACTCTGTTCTGGTGCTGCTCCTTTGGTTCATCATCTACAGACGCCACAGCAGGACCTCGCAGAGCACAGGTGAAAAGGACTCTGCGCCTCACACCCTGATAACCATAGAACAGGAAGAGAAAGCCCTGTCACCTTTGCCTCGCGTCAACGGCCAGAGACAGGAAGTGCCGATCGACGAGGGACCCTGTGGGCGGAGCCTGTGTAACGGAGGGGCGGAGCACGGGCTGCCACTTCCTGCCACAGAACTGGGATACTCCGCCCTCGTCACCACCAAAACCGGTCAACCTGTTTAAGCGTGAAGAGTAATGCGAGCAGCAGAATTAATACAGCGGCTAAATATCCAACATGGCAGCTGTGTTCTTCATGAATCCAGCTCGTATTCACATTCACTTCAAACTATAGACctcatgaaatcaaaactgcAGTGGCGTGGATCTCCGTTCATGAACCTCATGTGAAAGGAGATGCAGAAATCGGTTCACCAGCACTGGAATCTGTTGATCCTCAACAAAaccgtttttaaaaaaatttgggAGATCTCCAGCACACAGAtgatatttgttcatttttttctttcgcCCCGACTTTGTTCATTAATCAGCCAGT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043227680.1 True 985 mRNA 0.49 3 1660521 1663598

Neighbor

gene id symbol gene type direction distance location
LOC122329650 NA coding upstream 58867 1590678 ~ 1601654 (+)
LOC122329645 NA coding upstream 80700 1567345 ~ 1579821 (+)
cdc42ep1b LOC107579628,LOC107711548,LOC107711549 coding upstream 94579 1558351 ~ 1565942 (+)
LOC122329687 NA coding upstream 135045 1517508 ~ 1525476 (+)
LOC122329679 NA coding upstream 144110 1508493 ~ 1516411 (+)
LOC122330255 pmm1,LOC107672914,LOC107691086,LOC100007686 coding downstream 16716 1680314 ~ 1686977 (+)
LOC122330144 tob2,LOC107572283,LOC107691089,LOC107745517,LOC107734722,LOC107672913,LOC107563731 coding downstream 29458 1693056 ~ 1700663 (+)
LOC122329718 LOC107575253,LOC107595184,LOC107748256,LOC107740842,LOC107718680 coding downstream 47697 1711295 ~ 1727693 (+)
LOC122332958 NA coding downstream 64772 1728370 ~ 1729997 (+)
LOC122330213 plbd1,LOC107563730,LOC107572281,LOC107672894 coding downstream 204026 1867624 ~ 1870610 (+)
G16004 NA non-coding upstream 44992 1615160 ~ 1615529 (+)
G15944 NA non-coding upstream 169742 1485571 ~ 1490779 (+)
G15972 NA non-coding upstream 218779 1441259 ~ 1441742 (+)
G15967 NA non-coding upstream 245322 1414215 ~ 1415199 (+)
LOC122330682 NA non-coding upstream 275627 1383248 ~ 1384894 (+)
G16008 NA non-coding downstream 25444 1689042 ~ 1704676 (+)
G16027 LOC107691092,LOC107572810,LOC107722836 non-coding downstream 107159 1770757 ~ 1979709 (+)
G16028 NA non-coding downstream 113388 1776986 ~ 1989269 (+)
LOC122330751 NA non-coding downstream 161192 1824790 ~ 1826317 (+)
G16033 NA non-coding downstream 191297 1854895 ~ 1855684 (+)
trnar-ccu_1 NA other upstream 9793 1650656 ~ 1650728 (+)
G16003 pick1,LOC107734822,LOC106607154 other upstream 11027 1559387 ~ 1649494 (+)
trnar-ccu plbd1,LOC107563730 other upstream 37127 1620923 ~ 1623394 (+)
LOC122330032 LOC107674481,LOC107727039,LOC107711806,LOC107563760 other upstream 251595 1395847 ~ 1408926 (+)
G15955 NA other upstream 267671 1390739 ~ 1392850 (+)
trnar-ccu_2 NA other downstream 202115 1865713 ~ 1865785 (+)
G16222 LOC107751969,LOC107745511,LOC107572814,LOC107672897 other downstream 360750 2024348 ~ 2320138 (+)
G16223 txn2,LOC107745512 other downstream 448439 2112037 ~ 2114339 (+)
LOC122333054 LOC107708263,LOC107691115,LOC107755610,LOC107563748,LOC107672908 other downstream 496748 2160346 ~ 2165693 (+)
G16347 NA other downstream 904486 2568084 ~ 2568999 (+)

Expression


Co-expression Network