LOC122331163 (LOC107653472,LOC107718593,LOC107563253)


Basic Information

Item Value
gene id LOC122331163
gene name LOC107653472,LOC107718593,LOC107563253
gene type misc
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056701.1
NCBI id CM032070.1
chromosome length 30200998
location 5557008 ~ 5565974 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043228672.1
GGTTTTTGAAAACACCCGCGAAGTCAAAAACGCCCACTTTCTCTCCTCCTCGGTCGTGATTGGCTGCACGCTTTTCCTCTTCCGCACTCATCGCGTCAATCAGTGCGAAGTACGTTCCGACTTCTGCGCGAATACTTTTGATCAAACTACAGcaGTTTCACAGGAGCTGTAGAAAACAATGGAACGCCGgcACGCTGAGTTCGTGGACGCGCACTATGAAGCTCTCCTTCAGAGAGTTACGTCCGTGATGCCCATCACCGATAAGCTATACGAAAGCGGTATTCTTACCTGGGAAGTGTATTCGAAGATCACAAAGGCAATTTCTAAAAAGTCCCAAATGAGAGAGCTCGTAATTGCTGTGAAATCCGGAGGACCTGCGCTGAAATCTGCGTTTTACGAAGTACTGAAGGACATCGTGCCTGATGTCGTTCGAGAACTGGAGGGATCGCCCTCGCAGACGGACGATAAAAAACAGCTAACCGGGTCTCGCCGTCAAAGAGCAGAAGATGAAGAGGAGCAGGCTGGGATCGATATCACCAGGTGGAACCCATCCTCCATAAAGTACAGAAGTAACATAGAGGAGCTCAAGAACGACTCCTGCAGGAAAAAAGTCGGGAACCTCTACTTttctaaaagtaataaatacaTCATTGGCTGTGGAGGAAGTGGCACGGTTTATCTTGGCCTGAAGGAAGACGGCACTGAGGTGGCCATCAAACGGATAACCAAGGACCAACGGAAAAGCAAAGAGTTCGAGAACGAACTAAAGCATCTGCGGGATTTAAATCTGGAGAGTAAGAATATCGTCAGGTATGTGGACTTAGCGGAGGATGAGGACTTTTATTATCTCGCGCTGCAGCTTTGCGAATACGATATGGAGGATTACATGAAAAATCTTCTTCAGGAAGAGCAAGAGGGCAAAGACGCGGCTTTGAGGAAAGTAGTGAAGGAGATTCTCCTTGGCCTTCAGGTCCTTCACCACGCCGGAGTGATACACCGCGATATAAAGCCTGGGAATGTTTTGATAGATTCAGGAAAAAATGCCAGGCTGGCCGACTTTGGCTTAAGTCGCAAACTGGAGGAGGGCAGAAGCACAGTGCATACTGCTAGAGCTGGCACGCAAGGATGGGAGGCCACGGAGATCCTGAATCAAGGAACGGGTTACAAGAAGACCTCAGACATCCAGGTTGCTGGGATGTTGGTGTACTACATCCTCTCTGGTGGGAAACATCCCTTTGACGCAAAGGACACAAAGGACGCAAAGGATCGCGAGGAGAACATCAAGAAAGGGCTGCACTCTCTTGAAGGTTTACAAGATATAGTAGCAAAGGATCTCATAGAATGGATGATCAACAAAGACCCATCAGAGAGACTGACCATTGACGAGGTCCTACGACATCCTTATTTCTGGGATGATGACAGCAAAGATGCTGTCCTTCGAAAGCTGGGTGACATGCCTGAAATCCAGAACTATGAGACTTTAGCAAAACTTCACAAACTCTACAAAGAAAAAGGGCACAGAGAGGGAACGGACCCAGCAGGAACACTGACCATTCATGAGGCCTTTGGTGAACTGAAAATAGAGAGTGAAAAGAAGAGAAACGACATCCTTAATATAGTTGGTGTGGATTTAAAGTATCTTTGGAAGCTCTTCAACACAGCAGACGAGGTCACGAGAGGAAAAAGCTTTTCTAATTGGAAATCACAGcTCACAGAAATATGGCCAGACATTAACAAAAAGCTCCCAGAAGACATTCTTGGCCTGCTGCGCGTTTTGCGCAACAAACTGGTGCATGCAAATGTCAGAAAGGAATTTGAGGAGAAGAAGATTTTTGACCAGTTCCCGGACTTTTTCATCAGTTTACACAGAGTGGCTAAAGACTTGAGCTGGAGGCATTGAAGATGCACCACAACACTGCGTGTGAAATTGACTGGCTTGTCAGTGAGCTACGGCTggacataacattttatttgatcattatttCAGATGGATCCATCATTCTTGTTGACAAATTCAATCGCTGTTCTCACTTACATCTAATAAACTTCAAGGGTATGAATAAAAGCCTCCTGTagcaaatgcatgcatttttgtgaaaaaaaaatatccgtatttcaaatgtaataaacatttttctctcaATTTATCTGACTGTAATACCCACGAAAAGACGTCAACGTTGGGTGATCGGTGACAAACatggagagaaaagaaaacagaatgaTGTTCGTGAATTAGAGCAGTCTTTCCCAATCCTAGGCACATCTGATTTAACTCGTGAGCTCGCTAGAAGAAACTCCAGGACCTGAATTGGGTTTTTCAGATGAGGGAGACGTACATAATGTGTCAGGACCAGGGTTGAGAAACACTGAAGCGCAAACcaaggatttgtaaagaaaactGTTCTAGGGTTTTGACGCTGGTTTGCTTCCTTTGCTCCTGTGAAGAGACTCGTGAGACTAACACATCTCCATCATATGACAGCCAGCAGAATTGAGAGAACGGTGTTTACAGTTAAAGTATGGTTATCTTACAAAAAACGCCTGATTCACTACAGTAGGCCTTCATTCACCTCCAGAGCTACGTGAGGCACGTTTTATTATAGATGCACtcgctttattttaatatgggTTGGACTGTTCGACTGATACACGCACCCGTAACACTTGGAGAAGCCAGgaccatttttaatgtaactcaGATTTTTCTGCTTTAATAAAACTGAAGCAGAAAGTCATGATTTATGATTTGATATTGGTATAAAATCAAGCTTAAATCAACTATTCAGATGTTTtcataaattagcattttattcaCATGTTTAGAGAGAGCGGTCAATGAGTGTGTCTTCTGGAAATCAAACAggtttcaaaataaatagagtattttttatacattttttatgctaGGGCATAATTCCACTGTCACCGTATTGTGGTGTATGTGTGCAGCCGTGtttttatactataaaataaaaatgatgatgcTCGTTTCA
>XM_043228679.1
TTTGAAAACACCCGCGAAGTCAAAAACGCCCACTTTCTCTCCTCCTCGGTCGTGATTGGCTGCACGCTTTTCCTCTTCCGCACTCATCGCGTCAATCAGTGCGAAGTACGTTCCGACTTCTGCGCGAATACTTTTGATCAAACTACAGTTTCACAGGAGCTGTAGAAAACAATGGAACGCCGgcACGCTGAGTTCGTGGACGCGCACTATGAAGCTCTCCTTCAGAGAGTTACGTCCGTGATGCCCATCACCGATAAGCTATACGAAAGCGGTATTCTTACCTGGGAAGTGTATTCGAAGATCACAAAGGCAATTTCTAAAAAGTCCCAAATGAGAGAGCTCGTAATTGCTGTGAAATCCGGAGGACCTGCGCTGAAATCTGCGTTTTACGAAGTACTGAAGGACATCGTGCCTGATGTCGTTCGAGAACTGGAGGGATCGCCCTCGCAGACGGACGATAAAAAACAGCTAACCGGGTCTCGCCGTCAAAGAGCAGAAGATGAAGAGGAGCAGGCTGGGATCGATATCACCAGGTGGAACCCATCCTCCATAAAGTACAGAAGTAACATAGAGGAGCTCAAGAACGACTCCTGCAGGAAAAAAGTCGGGAACCTCTACTTttctaaaagtaataaatacaTCATTGGCTGTGGAGGAAGTGGCACGGTTTATCTTGGCCTGAAGGAAGACGGCACTGAGGTGGCCATCAAACGGATAACCAAGGACCAACGGAAAAGCAAAGAGTTCGAGAACGAACTAAAGCATCTGCGGGATTTAAATCTGGAGAGTAAGAATATCGTCAGGTATGTGGACTTAGCGGAGGATGAGGACTTTTATTATCTCGCGCTGCAGCTTTGCGAATACGATATGGAGGATTACATGAAAAATCTTCTTCAGGAAGAGCAAGAGGGCAAAGACGCGGCTTTGAGGAAAGTAGTGAAGGAGATTCTCCTTGGCCTTCAGGTCCTTCACCACGCCGGAGTGATACACCGCGATATAAAGCCTGGGAATGTTTTGATAGATTCAGGAAAAAATGCCAGGCTGGCCGACTTTGGCTTAAGTCGCAAACTGGAGGAGGGCAGAAGCACAGTGCATACTGCTAGAGCTGGCACGCAAGGATGGGAGGCCACGGAGATCCTGAATCAAGGAACGGGTTACAAGAAGACCTCAGACATCCAGGTTGCTGGGATGTTGGTGTACTACATCCTCTCTGGTGGGAAACATCCCTTTGACGCAAAGGACACAAAGGACGCAAAGGATCGCGAGGAGAACATCAAGAAAGGGCTGCACTCTCTTGAAGGTTTACAAGATATAGTAGCAAAGGATCTCATAGAATGGATGATCAACAAAGACCCATCAGAGAGACTGACCATTGACGAGGTCCTACGACATCCTTATTTCTGGGATGATGACAGCAAAGATGCTGTCCTTCGAAAGCTGGGTGACATGCCTGAAATCCAGAACTATGAGACTTTAGCAAAACTTCACAAACTCTACAAAGAAAAAGGGCACAGAGAGGGAACGGACCCAGCAGGAACACTGACCATTCATGAGGCCTTTGGTGAACTGAAAATAGAGAGTGAAAAGAAGAGAAACGACATCCTTAATATAGTTGGTGTGGATTTAAAGTATCTTTGGAAGCTCTTCAACACAGCAGACGAGGTCACGAGAGGAAAAAGCTTTTCTAATTGGAAATCACAGcTCACAGAAATATGGCCAGACATTAACAAAAAGCTCCCAGAAGACATTCTTGGCCTGCTGCGCGTTTTGCGCAACAAACTGGTGCATGCAAATGTCAGAAAGGAATTTGAGGAGAAGAAGATTTTTGACCAGTTCCCGGACTTTTTCATCAGTTTACACAGAGTGGCTAAAGACTTGAGCTGGAGGCATTGAAGATGCACCACAACACTGCGTGTGAAATTGACTGGCTTGTCAGTGAGCTACGGCTggacataacattttatttgatcattatttCAGATGGATCCATCATTCTTGTTGACAAATTCAATCGCTGTTCTCACTTACATCTAATAAACTTCAAGGGTATGAATAAAAGCCTCCTGTagcaaatgcatgcatttttgtgaaaaaaaaatatccgtatttcaaatgtaataaacatttttctctcaATTTATCTGACTGTAATACCCACGAAAAGACGTCAACGTTGGGTGATCGGTGACAAACatggagagaaaagaaaacagaatgaTGTTCGTGAATTAGAGCAGTCTTTCCCAATCCTAGGCACATCTGATTTAACTCGTGAGCTCGCTAGAAGAAACTCCAGGACCTGAATTGGGTTTTTCAGATGAGGGAGACGTACATAATGTGTCAGGACCAGGGTTGAGAAACACTGAAGCGCAAACcaaggatttgtaaagaaaactGTTCTAGGGTTTTGACGCTGGTTTGCTTCCTTTGCTCCTGTGAAGAGACTCGTGAGACTAACACATCTCCATCATATGACAGCCAGCAGAATTGAGAGAACGGTGTTTACAGTTAAAGTATGGTTATCTTACAAAAAACGCCTGATTCACTACAGTAGGCCTTCATTCACCTCCAGAGCTACGTGAGGCACGTTTTATTATAGATGCACtcgctttattttaatatgggTTGGACTGTTCGACTGATACACGCACCCGTAACACTTGGAGAAGCCAGgaccatttttaatgtaactcaGATTTTTCTGCTTTAATAAAACTGAAGCAGAAAGTCATGATTTATGATTTGATATTGGTATAAAATCAAGCTTAAATCAACTATTCAGATGTTTtcataaattagcattttattcaCATGTTTAGAGAGAGCGGTCAATGAGTGTGTCTTCTGGAAATCAAACAggtttcaaaataaatagagtattttttatacattttttatgctaGGGCATAATTCCACTGTCACCGTATTGTGGTGTATGTGTGCAGCCGTGtttttatactataaaataaaaatgatgatgcTCGTTTCA
>XR_006248137.1
GGTTTTTGAAAACACCCGCGAAGTCAAAAACGCCCACTTTCTCTCCTCCTCGGTCGTGATTGGCTGCACGCTTTTCCTCTTCCGCACTCATCGCGTCAATCAGTGCGAAGTACGTTCCGACTTCTGCGCGAATACTTTTGATCAAACTACAGcaGTTTCACAGGAGCTGTAGAAAACAATGGAACGCCGgcACGCTGAGTTCGTGGACGCGCACTATGAAGCTCTCCTTCAGAGAGTTACGTCCGTGATGCCCATCACCGATAAGCTATACGAAAGCGGTATTCTTACCTGGGAAGTGTATTCGAAGATCACAAAGGCAATTTCTAAAAAGTCCCAAATGAGAGAGCTCGTAATTGCTGTGAAATCCGGAGGACCTGCGCTGAAATCTGCGTTTTACGAAGTACTGAAGGACATCGTGCCTGATGTCGTTCGAGAACTGGAGGGATCGCCCTCGCAGACGGACGATAAAAAACAGCTAACCGGGTCTCGCCGTCAAAGAGCAGAAGATGAAGAGGAGCAGGCTGGGATCGATATCACCAGGTGGAACCCATCCTCCATAAAGTACAGAAGTAACATAGAGGAGCTCAAGAACGACTCCTGCAGGAAAAAAGTCGGGAACCTCTACTTttctaaaagtaataaatacaTCATTGGCTGTGGAGGAAGTGGCACGGTTTATCTTGGCCTGAAGGAAGACGGCACTGAGGTGGCCATCAAACGGATAACCAAGGACCAACGGAAAAGCAAAGAGTTCGAGAACGAACTAAAGCATCTGCGGGATTTAAATCTGGAGAGTAAGAATATCGTCAGGTATGTGGACTTAGCGGAGGATGAGGACTTTTATTATCTCGCGCTGCAGCTTTGCGAATACGATATGGAGGATTACATGAAAAATCTTCTTCAGGAAGAGCAAGAGGGCAAAGACGCGGCTTTGAGGAAAGTAGTGAAGGAGATTCTCCTTGGCCTTCAGGTCCTTCACCACGCCGGAGTGATACACCGCGATATAAAGCCTGGGAATGTTTTGATAGATTCAGGAAAAAATGCCAGGCTGGCCGACTTTGGCTTAAGTCGCAAACTGGAGGAGGGCAGAAGCACAGTGCATACTGCTAGAGCTGGCACGCAAGGATGGGAGGCCACGGAGATCCTGAATCAAGGAACGGGTTACAAGAAGACCTCAGACATCCAGGTTGCTGGGATGTTGGTGTACTACATCCTCTCTGGTGGGAAACATCCCTTTGACGCAAAGGACACAAAGGACGCAAAGGATCGCGAGGAGAACATCAAGAAAGGGCTGCACTCTCTTGAAGGTTTACAAGATATAGTAGCAAAGGATCTCATAGAATGGATGATCAACAAAGACCCATCAGAGAGACTGACCATTGACGAGGTCCTACGACATCCTTATTTCTGGGATGATGACAGCAAAGATGCTGTCCTTCGAAAGCTGGGTGACATGCCTGAAATCCAGAACTATGAGACTTTAGCAAAACTTCACAAACTCTACAAAGAAAAAGGGCACAGAGAGGGAACGGACCCAGCAGGAACACTGACCATTCATGAGGCCTTTGGTGAACTGAAAATAGAGAGTGAAAAGAAGAGAAACGACATCCTTAATATAGTTGGTGTGGATTTAAAGTATCTTTGGAAGCTCTTCAACACAGCAGACGAGGTCACGAGAGGAAAAAGCTTTTCTAATTGGAAATCACAGcTCACAGAAATATGGCCAGACATTAACAAAAAGCTCCCAGAAGACATTCTTGGCCTGCTGCGCGTTTTGCGCAACAAACTGGTGCATGCgtgagtgagagaaaaaaaaccttttttgctCATTCCAGCTGGCTTTCATCGACATGGAAATAGAAATGTCAGAAAGGAATTTGAGGAGAAGAAGATTTTTGACCAGTTCCCGGACTTTTTCATCAGTTTACACAGAGTGGCTAAAGACTTGAGCTGGAGGCATTGAAGATGCACCACAACACTGCGTGTGAAATTGACTGGCTTGTCAGTGAGCTACGGCTggacataacattttatttgatcattatttCAGATGGATCCATCATTCTTGTTGACAAATTCAATCGCTGTTCTCACTTACATCTAATAAACTTCAAGGGTATGAATAAAAGCCTCCTGTagcaaatgcatgcatttttgtgaaaaaaaaatatccgtatttcaaatgtaataaacatttttctctcaATTTATCTGACTGTAATACCCACGAAAAGACGTCAACGTTGGGTGATCGGTGACAAACatggagagaaaagaaaacagaatgaTGTTCGTGAATTAGAGCAGTCTTTCCCAATCCTAGGCACATCTGATTTAACTCGTGAGCTCGCTAGAAGAAACTCCAGGACCTGAATTGGGTTTTTCAGATGAGGGAGACGTACATAATGTGTCAGGACCAGGGTTGAGAAACACTGAAGCGCAAACcaaggatttgtaaagaaaactGTTCTAGGGTTTTGACGCTGGTTTGCTTCCTTTGCTCCTGTGAAGAGACTCGTGAGACTAACACATCTCCATCATATGACAGCCAGCAGAATTGAGAGAACGGTGTTTACAGTTAAAGTATGGTTATCTTACAAAAAACGCCTGATTCACTACAGTAGGCCTTCATTCACCTCCAGAGCTACGTGAGGCACGTTTTATTATAGATGCACtcgctttattttaatatgggTTGGACTGTTCGACTGATACACGCACCCGTAACACTTGGAGAAGCCAGgaccatttttaatgtaactcaGATTTTTCTGCTTTAATAAAACTGAAGCAGAAAGTCATGATTTATGATTTGATATTGGTATAAAATCAAGCTTAAATCAACTATTCAGATGTTTtcataaattagcattttattcaCATGTTTAGAGAGAGCGGTCAATGAGTGTGTCTTCTGGAAATCAAACAggtttcaaaataaatagagtattttttatacattttttatgctaGGGCATAATTCCACTGTCACCGTATTGTGGTGTATGTGTGCAGCCGTGtttttatactataaaataaaaatgatgatgcTCGTTTCA

Function

NR:

description
PREDICTED: serine/threonine-protein kinase/endoribonuclease ire-1-like isoform X2

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043228672.1 False 2996 mRNA 0.44 11 5557008 5565974
XM_043228679.1 False 2989 mRNA 0.44 11 5557012 5565974
XR_006248137.1 True 3059 transcript 0.43 11 5557008 5565974

Neighbor

gene id symbol gene type direction distance location
LOC122331179 LOC107550260,LOC107659569 coding upstream 869 5551196 ~ 5556139 (+)
LOC122341561 LOC107711124,LOC107659564,LOC107550256,LOC107718588,LOC107656793,LOC107579440 coding upstream 143875 5409599 ~ 5413133 (+)
swsap1 LOC107550247 coding upstream 274687 5280179 ~ 5282321 (+)
gadd45gip1 LOC107553677,LOC107661658,LOC107735399,LOC107715629,LOC107550245 coding upstream 315682 5239573 ~ 5241326 (+)
nme4 nme4,LOC107715653,LOC107695718,LOC107718576,LOC107661657,LOC107553633 coding upstream 565614 4987440 ~ 4991394 (+)
LOC122331145 NA coding downstream 591 5566565 ~ 5574214 (+)
gcdhb gcdhb,gcdh,LOC107718595,LOC107653471,LOC107731476,LOC107563244,LOC102794743 coding downstream 8427 5574401 ~ 5580741 (+)
tufm tufm,LOC107718598,LOC107659578,LOC107731475,LOC101070424,LOC106931188 coding downstream 251069 5817043 ~ 5821892 (+)
amdhd2 amdhd2,LOC107661858,LOC107718599,LOC107653464,LOC107753757 coding downstream 359255 5925229 ~ 5933647 (+)
slc25a19 slc25a19,LOC107661860,LOC107563233,LOC107565621,LOC107653449,LOC107718625 coding downstream 371458 5937432 ~ 5942586 (+)
G17115 NA non-coding upstream 39144 5450539 ~ 5517864 (+)
G17112 NA non-coding upstream 150845 5405770 ~ 5406163 (+)
G17056 NA non-coding upstream 299256 5254500 ~ 5257752 (+)
G17061 NA non-coding upstream 336636 5219650 ~ 5220372 (+)
LOC122341773 NA non-coding upstream 345315 5207244 ~ 5211693 (+)
G17300 NA non-coding downstream 28012 5593986 ~ 5594547 (+)
G17315 NA non-coding downstream 81271 5647245 ~ 5648079 (+)
G17322 NA non-coding downstream 124561 5690535 ~ 5695636 (+)
G17312 LOC107550264,LOC107659563,LOC107653452,LOC107563254,LOC107718634 non-coding downstream 169115 5735089 ~ 5737125 (+)
G17337 NA non-coding downstream 186007 5751981 ~ 5752280 (+)
nfil3-2 nfil3-2,LOC107659565,LOC107550255,LOC107711126,LOC107718587,LOC107563256,LOC107656794 other upstream 76401 5415758 ~ 5480607 (+)
elof1 elof1,LOC103393660,LOC100703874,LOC106589640,LOC106935058,LOC103384163 other upstream 244637 5310493 ~ 5312371 (+)
G16981 NA other upstream 650042 4905656 ~ 4906966 (+)
G16978 LOC107601574,LOC107654242,LOC107715645 other upstream 1010441 4470732 ~ 4546567 (+)
G16979 NA other upstream 1094734 4458698 ~ 4462274 (+)
G17302 NA other downstream 31125 5597099 ~ 5598232 (+)
LOC122341474 dhps,LOC107661880,LOC107563249,LOC107653447,LOC107718601,LOC107563248 other downstream 391429 5957403 ~ 5962888 (+)
fbxw9 fbxw9,LOC107661857 other downstream 532227 6098201 ~ 6103626 (+)
LOC122341437 LOC107718607,LOC107653460 other downstream 620834 6186808 ~ 6195038 (+)
G17590 NA other downstream 938941 6504915 ~ 6556750 (+)

Expression


Co-expression Network