si:dkey-283b1.6


Basic Information

Item Value
gene id si:dkey-283b1.6
gene name NA
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056701.1
NCBI id CM032070.1
chromosome length 30200998
location 12493718 ~ 12498011 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043228924.1
CTCAGATAAGACTCAGTCTCAAATCAGAGCAGTGCATTCAACATACTTTATTGCTGTAATCACCCGTGTGTTCTTTAAGAGTTGCTTCTGAATTGTAAATTTCTTCATTGCCATGGACAGCAGTGATGATCCACTTTTAGTATTTAAGATCTTCGTGCCTATCGTATCCTTCGGTTTTTTGTCGATCTGCTGCGCTGGCTTGTGCAAAATCTTCCAGCGGGTTCGCGAGGAGCGCGAGGGACGCGAGGAGCGCGTGCAGGCTGCTGCTCGCGCCGCGGATCGACCGTCCGTCTACGTCATCCCGCTCTCTCTGTCTGAAGACGAGCGGCACGGACCCCCGCGCTACAGCACCGTGCAGTTCTACGAGGCGCCTCCGGCTTACCACGAGTTGAATCTGAAGCCCGAGACCTGTCCTGTGGAGCCTCCTCCAGCATATTCAGAATCCGCCTCTCCTTCACATTCATGATCAACCTGAAGCACGTCTCGAAAACACCGGTTAAAGGAAAAATAAGATGCGACGTCACATTATCGTGACTTTTCCAAGCACTACTACTCATGCTACCTATGCAAAGGTTCAGATGATGAGAAAGAAAATGTGACAGTTATAATAATCTTTGAGTCTGTTGAGatttaaacacaaacatgttgTCCTACAAGAGTCACAAAGAAAGATTGTTTTGCACAATGAGCAGCAGAACTTggttaaaaaagtatatacatatatatatatatatgttttgttttgtggataTTTATCAATTTTGTACATGCTATGTATAAGCATTTTTAGTTAACTTTGtgaatgtgttcattttaataaatgttgtaaattGTTGTAAATTGTAGAGCTGAAACTTTATGATTAAAATGACGTATAAACTGG
>XM_043228928.1
TTCAACATACTTTATTGCTGTAATCACCCGTGTGTTCTTTAAGGTaagattatatttgtttttcagagatGTGCTTGAAGACTAGCTGGCTGTAGAGAGTTGCTTCTGAATTGTAAATTTCTTCATTGCCATGGACAGCAGTGATGATCCACTTTTAGTATTTAAGATCTTCGTGCCTATCGTATCCTTCGGTTTTTTGTCGATCTGCTGCGCTGGCTTGTGCAAAATCTTCCAGCGGGTTCGCGAGGAGCGCGAGGGACGCGAGGAGCGCGTGCAGGCTGCTGCTCGCGCCGCGGATCGACCGTCCGTCTACGTCATCCCGCTCTCTCTGTCTGAAGACGAGCGGCACGGACCCCCGCGCTACAGCACCGTGCAGTTCTACGAGGCGCCTCCGGCTTACCACGAGTTGAATCTGAAGCCCGAGACCTGTCCTGTGGAGCCTCCTCCAGCATATTCAGAATCCGCCTCTCCTTCACATTCATGATCAACCTGAAGCACGTCTCGAAAACACCGGTTAAAGGAAAAATAAGATGCGACGTCACATTATCGTGACTTTTCCAAGCACTACTACTCATGCTACCTATGCAAAGGTTCAGATGATGAGAAAGAAAATGTGACAGTTATAATAATCTTTGAGTCTGTTGAGatttaaacacaaacatgttgTCCTACAAGAGTCACAAAGAAAGATTGTTTTGCACAATGAGCAGCAGAACTTggttaaaaaagtatatacatatatatatatatatgttttgttttgtggataTTTATCAATTTTGTACATGCTATGTATAAGCATTTTTAGTTAACTTTGtgaatgtgttcattttaataaatgttgtaaattGTTGTAAATTGTAGAGCTGAAACTTTATGATTAAAATGACGTATAAACTGG

Function

NR:

description
uncharacterized protein LOC110486142 isoform X2

GO:

id name namespace
GO:0006030 chitin metabolic process biological_process
GO:0006032 chitin catabolic process biological_process
GO:0046348 amino sugar catabolic process biological_process
GO:1901072 glucosamine-containing compound catabolic process biological_process
GO:0006026 aminoglycan catabolic process biological_process

KEGG:

id description
ko04974 Protein digestion and absorption

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043228924.1 False 883 mRNA 0.43 4 12493718 12498011
XM_043228928.1 True 901 mRNA 0.42 4 12493718 12497975

Neighbor

gene id symbol gene type direction distance location
rarab rara,rarab,LOC108434941,LOC108276117,LOC108261354,LOC107737746,LOC107695008,LOC107554136,LOC107582978,LOC107689638 coding downstream 45994 12345435 ~ 12447724 (-)
LOC122342092 LOC107758479 coding downstream 160877 12322244 ~ 12332841 (-)
LOC122336412 LOC107658520,LOC107554095,LOC107582983,LOC107729569,LOC107689640,LOC107737779 coding downstream 173652 12315450 ~ 12320066 (-)
aoc2 aoc2,LOC107658518,LOC107729559,LOC107582984,LOC107689706 coding downstream 193145 12297054 ~ 12300573 (-)
g6pc1b g6pcb,LOC107582985,LOC107729528,LOC107658515,LOC107554093 coding downstream 202734 12288422 ~ 12290984 (-)
abi3a LOC107758490,LOC107583075,LOC107695026 coding upstream 763 12498774 ~ 12508792 (-)
LOC122342135 LOC107695140,LOC107758481,LOC107583074 coding upstream 11180 12509191 ~ 12510507 (-)
ccdc103 LOC107758482,LOC107583073,LOC107695153 coding upstream 12598 12510609 ~ 12512465 (-)
rpl23 rpl23,RPL23,rl23 coding upstream 14592 12512603 ~ 12514795 (-)
si:dkey-283b1.7 si:dkey-283b1.7,LOC107758487,LOC107695187,LOC107689703,LOC107554098,LOC107737768 coding upstream 17139 12515150 ~ 12521787 (-)
LOC122332655 NA non-coding downstream 198295 12294140 ~ 12295423 (-)
LOC122341243 LOC107729463,LOC107658509,LOC107582987 non-coding downstream 222782 12265845 ~ 12270936 (-)
G19518 LOC107729456,LOC107658501,LOC107582995,LOC107554123,LOC107689649,LOC107737759 non-coding downstream 263339 12226575 ~ 12230379 (-)
G19503 NA non-coding downstream 311234 12182258 ~ 12182484 (-)
G19463 NA non-coding downstream 396356 12092899 ~ 12097362 (-)
G19677 LOC107737766 non-coding upstream 366299 12864310 ~ 12886954 (-)
G19672 alkbh7,LOC107723204,LOC107690706 non-coding upstream 402770 12900781 ~ 12902910 (-)
LOC122332187 NA non-coding upstream 574549 13072560 ~ 13072828 (-)
LOC122332138 ighv5-5,ighm,ighv5-4,ighv5-8 non-coding upstream 582059 13080070 ~ 13080621 (-)
G19703 ighv6-1 non-coding upstream 592660 13090671 ~ 13091152 (-)
LOC122342093 LOC107583078,LOC107754431,LOC107583076 other downstream 149846 12339187 ~ 12343872 (-)
LOC122341756 NA other downstream 572951 11909775 ~ 11920767 (-)
G19383 NA other downstream 612759 11853748 ~ 11880959 (-)
limd2 limd2,LOC107674139,LOC107658411,LOC107721965 other downstream 765717 11712820 ~ 11728001 (-)
map3k3 map3k3,LOC107658467,LOC107583042,LOC107570753,LOC107674169,LOC107721962 other downstream 778999 11694272 ~ 11714719 (-)
G19606 LOC107583095,LOC107690711,LOC107723203,LOC107571501,LOC107689702,LOC107737775 other upstream 124772 12622783 ~ 12679800 (-)
cacna1aa LOC107690704,LOC107571502 other upstream 183979 12681990 ~ 12763090 (-)
G19676 LOC107690708 other upstream 507985 13005996 ~ 13068190 (-)
G19700 NA other upstream 549030 13047041 ~ 13047494 (-)
gng13b NA other upstream 1287998 13786009 ~ 13792602 (-)

Expression


Co-expression Network