si:dkeyp-69e1.8 (LOC107758106,LOC107658694,LOC107703890,LOC107728849,LOC107563364,LOC107559220)


Basic Information

Item Value
gene id si:dkeyp-69e1.8
gene name LOC107758106,LOC107658694,LOC107703890,LOC107728849,LOC107563364,LOC107559220
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056701.1
NCBI id CM032070.1
chromosome length 30200998
location 24558746 ~ 24562589 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043229063.1
gaggaggccgTCCCAACAGCAGCATCACATGTTCAGGCAGAGCTACACCGCCGGCAGTGTTTAGACTGAACAGCAGGAGGAGAAACAGGAAGTGCAGAGGAACACAGACCAGGCCAACTCATAAGCACACGGCACACAGAAGATCTCCCACTTGAAGCTGCAGACTATGGAGGGAAGTACGACACAGGATGAAATTCGCCAGGAAGAGAAAGATGGATCCGGAAGCAGTGAAGGAGGGCAGACGGATCTGAAGGAGAGAGAGTTGAGACTGGTGCTGCTCGGCTCGGCGGGTGCTGGGAAAAGCAGTGCGGTCAATGCCCTCCTGGGCGGCCTGGCATCTGAGTCTGACTGTACGGGCCCCGAGACGCCGGCCCCTGACTGTCAGAAGAGACGCGGGACGCTGGCGGAGAGACAGGTGGCTGTCGTGGACACACCTGACTGCCTGTGCGTGGAGCGTCCCGCTGAGGACGTCCGCCGCCAGTTTTCTCTCTGCGCTGCTTTATCGGCCCCGGGGCCCCACGCTTTCCTGCTCTGCGTCCCTGTGCACCGGCCCAGCAACCTGGAGCTCCAGATTTTAGAGACCGTCGAGAAGGTGTTCGGCCCCGAGGCGGTCAGTAAACACGCCATGGTGCTCTTCACTCGCATGGAGCGACTGCCCGAGGACGTCTCCCTGGACGAGTATCTCAACGCAGAGCGGCCCGACTTGCTGGAGCTCGTGCAGAAGTGCCGGGACCGACATCACCCGCTCCAGCTGGGATCCGGCGCGGAGGAGCTGGTCGAGAAGGTGGAGAAGATGGTGGAAGAAAGCGGGGCGCGCTTCTACACCTGCCCTCTGCTGCGGGAGGCAGAGAGGAGAGTGAAAGAGAAGCAGGAGGAGATCTCCAGGAGCAGGGGGGGAAAGGGAGGGGACGATCGCGAGGGAATAAGGGCCGAAGCGGAGAGGAGCGTGGACCATTTGGAGGTTGAGGGAATCGCAGAGCTCTGCGTCTCTACGACTGACGCCTCGTTCTTGCGCCGGTTGTGGGACAGTGCGGTCGGGTGGCTCCTGTGGCTCCCCAATATGGTGAGGGGCAGTGCTTTACTGGGGTCCATCGTGGGCTTGTTCGTCGGGGGGCCCTTAGGAGGGGCCATGGGAGCTACGGTGGGGTCTGTGGCGACCGAGGTGGGCAGACGGAAACAAAAAACCAAGTGAGCGCTTGgaaatttggtaacactttattgcaATTTTCATTATgtcactgagaaacatcacacaACTGATCGGTTGTTCTTGAACgtttaaatatatagaaatagtCAGCTTTAAACGTCATTACAAATGCTAACAAATTGTTTTTCTAGTGAATACaagcttttttccccctttacattattattagtgctgccAAACTATTAATCGTtgttaactgcatccaaaataaaagtttttgtttttgtattgtta

Function

NR:

description
PREDICTED: GTPase IMAP family member 7-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043229063.1 True 1444 mRNA 0.56 4 24558746 24562589

Neighbor

gene id symbol gene type direction distance location
hmgxb4a LOC107658693,LOC107758107,LOC107728447,LOC107703878,LOC107563362 coding upstream 1634 24549227 ~ 24557112 (+)
ankrd54 ankrd54,LOC107670919,LOC107559232,LOC107563363,LOC107719341,LOC107728844,LOC107703879 coding upstream 9653 24545411 ~ 24549093 (+)
foxred2 foxred2,LOC107719334,LOC107559237,LOC107670923,LOC107703880 coding upstream 13532 24539323 ~ 24545214 (+)
gcat gcat,LOC107703894,LOC107670921 coding upstream 34146 24521028 ~ 24524600 (+)
LOC122341365 NA coding upstream 184182 24369213 ~ 24374564 (+)
s1pr5a s1pr5a,LOC107758128,LOC107577264,LOC107658699,LOC107728470 coding downstream 52010 24614599 ~ 24618241 (+)
LOC122342023 rln3a,LOC107658697,LOC107758104,LOC107559241,LOC107568237,LOC107696003 coding downstream 205040 24767629 ~ 24769271 (+)
il12rb2l LOC107758123 coding downstream 208702 24771291 ~ 24781610 (+)
LOC122342030 LOC107658707,LOC107559242,LOC107728516,LOC107695967 coding downstream 253284 24815873 ~ 24828439 (+)
LOC122342024 chchd4a,chchd4,LOC107574929,LOC107718204,LOC107715767,LOC107551797 coding downstream 268836 24831425 ~ 24833956 (+)
G23002 NA non-coding upstream 485 24557711 ~ 24558261 (+)
G22968 NA non-coding upstream 41748 24133726 ~ 24516998 (+)
G22988 mfsd6l,LOC107719337,LOC107728393,LOC107583315,LOC107703882 non-coding upstream 108876 24268426 ~ 24449870 (+)
G22990 NA non-coding upstream 219092 24338871 ~ 24339654 (+)
G22982 NA non-coding upstream 322671 24233766 ~ 24236075 (+)
G23005 NA non-coding downstream 223 24562812 ~ 24563127 (+)
G23004 NA non-coding downstream 657 24563246 ~ 24563895 (+)
G23011 NA non-coding downstream 49937 24612526 ~ 24612751 (+)
G23014 ldlra,ldlr,LOC107758126,LOC107658701 non-coding downstream 52578 24615167 ~ 24673712 (+)
G23013 LOC107658701,LOC107758126 non-coding downstream 77991 24640580 ~ 24650704 (+)
mcm5 mcm5,LOC107703892,LOC107670920,LOC107719335 other upstream 27977 24525280 ~ 24530769 (+)
G22953 mfsd6l,LOC107719337,LOC107583315,LOC107563357,LOC107728393,LOC107703882 other upstream 109457 24446878 ~ 24449289 (+)
G22996 LOC107703883,LOC107563351,LOC107719336,LOC107583295 other upstream 119283 24434055 ~ 24439463 (+)
G22958 NA other upstream 461587 24095024 ~ 24097159 (+)
LOC122342055 pik3r6,LOC107719336,LOC107703883,LOC107563351,LOC107728708,LOC107583295 other upstream 506833 24039902 ~ 24051913 (+)
G23026 LOC107559242,LOC107758098,LOC107658707,LOC107728516,LOC107695967,LOC107568243 other downstream 158937 24721526 ~ 24811577 (+)
LOC122342019 LOC107758123 other downstream 420692 24983281 ~ 24993218 (+)
arhgap17b arhgap17b,LOC107559249,LOC107758115,LOC107670674,LOC107689995,LOC107728593 other downstream 784195 25346784 ~ 25374498 (+)
G23061 rps2,LOC107758112,LOC107690003,LOC107555664 other downstream 849329 25411918 ~ 25447270 (+)
tob1a tob1a,LOC107690006,LOC107758110,LOC107555665,LOC107583660,LOC107728672,LOC107670673 other downstream 961720 25524309 ~ 25569403 (+)

Expression


Co-expression Network