hbbe1.1 (LOC107587921,LOC107596825,LOC107674643,LOC107703325)


Basic Information

Item Value
gene id hbbe1.1
gene name LOC107587921,LOC107596825,LOC107674643,LOC107703325
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056701.1
NCBI id CM032070.1
chromosome length 30200998
location 9789355 ~ 9790164 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043229144.1
aactctctctctccacagcaCTCTTTAGCATCCGTTCAAGGCACTCAGTCTGAACATCTAAAGTCGGAAACATGGTTGAGTGGACAGACTTTGAGAGGACCACCATCCAGGACATCTTCTCCAAGATGAACTACGAAGTCGTTGGTCAGCAGGCTCTGGCAAGATGTCTCATCGTTTACCCCTGGACCCAGAGGTACTTTGGCAAGTTCGGTAACCTGTACAACGCCTCTGCCATCATGGGAAACCCCATGGTTGCTGCTCACGGAGCAGTCGTGCTCCACGGCCTGGACAAAGCTGTGAAGAACATGGACAACATCAAAGCCGCCTATGCTGAACTGAGCGTGCTGCACTCCGAGAAGCTCCACGTAGATCCTGACAACTTCAGGCTTTTGGGTGACTGCCTGACCATCGTTGTTGCTGGACAGCTGGGCTCTGGATTCACCCCTGAGGTCCAGGCCGCTTTCCAGAAATTCCTCGCCGTCGTGGTCTCATCTCTTCAGAGACAGTACCACTAGAAACAAAACCCGTTTTAACTGCAGAGAAGATCATCTGATGTTTAAACAAAAGAGTGTGTTCTTCTGAGttgaagcaaataaatatttcagtattcaaTATGTA

Function

NR:

description
PREDICTED: hemoglobin subunit beta-2-like

GO: NA

KEGG:

id description
K13825 HBE; hemoglobin subunit epsilon

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043229144.1 True 618 mRNA 0.49 3 9789355 9790164

Neighbor

gene id symbol gene type direction distance location
LOC122341659 si:ch211-5k11.8,hbaa1,LOC107587926 coding upstream 3232 9785282 ~ 9786123 (+)
hbaa2 si:ch211-5k11.6,hbz,LOC107587927,LOC107672462,LOC107670501 coding upstream 10065 9778492 ~ 9779290 (+)
mpg si:xx-by187g17.9,LOC107596818,LOC107754030,LOC107670500,LOC107672429,LOC107587979,LOC107711169 coding upstream 28171 9755181 ~ 9761184 (+)
mgrn1b mgrn1,mgrn1b,LOC107754037,LOC107672503,LOC107711275,LOC107670506 coding upstream 96718 9679898 ~ 9692637 (+)
LOC122341977 NA coding upstream 116551 9667567 ~ 9672804 (+)
hbbe1.2 LOC107703325,LOC107587921,LOC107596828,LOC107596825 coding downstream 2492 9792656 ~ 9793389 (+)
LOC122331228 LOC107596828,LOC107596825,LOC107703325,LOC107587921,LOC107674643 coding downstream 5625 9795789 ~ 9796532 (+)
LOC122332778 NA coding downstream 13409 9803573 ~ 9804386 (+)
angptl8 NA coding downstream 70299 9860463 ~ 9863218 (+)
elavl3 elavl3,LOC107754020,LOC107674672,LOC107703356,LOC106607222,LOC102780136 coding downstream 102369 9892533 ~ 9908575 (+)
G18502 ba1,ba2 non-coding upstream 4897 9775320 ~ 9784458 (+)
G18470 dnmt1,LOC107670489 non-coding upstream 186291 9602642 ~ 9603064 (+)
G18458 LOC107672431,LOC107711167,LOC107587937 non-coding upstream 213453 9574881 ~ 9575902 (+)
G18457 NA non-coding upstream 214866 9574289 ~ 9574489 (+)
G18456 LOC107672431,LOC107587937 non-coding upstream 215093 9573184 ~ 9574262 (+)
G18507 NA non-coding downstream 64439 9854603 ~ 9859173 (+)
G18517 NA non-coding downstream 75622 9865786 ~ 9943153 (+)
G18549 prkcsh,LOC107703311,LOC107725022,LOC107754018,LOC107587972 non-coding downstream 120793 9910957 ~ 9911612 (+)
G18671 NA non-coding downstream 483810 10273974 ~ 10302050 (+)
G18744 NA non-coding downstream 781655 10571819 ~ 10579144 (+)
G18491 NA other upstream 39475 9739796 ~ 9749880 (+)
aanat2 aanat2,LOC107672440,LOC107670449,LOC107588006,LOC107596820,LOC107754039 other upstream 91440 9692949 ~ 9697915 (+)
LOC122341719 pet100,LOC107563330,LOC107672445,LOC107587949 other upstream 603695 9184399 ~ 9185660 (+)
brd4 LOC107711252,LOC107587947,LOC107672460,LOC107670433,LOC107757365,LOC107563328 other upstream 606065 9138467 ~ 9183290 (+)
pgls pgls,LOC107672478,LOC107711179,LOC107757376,LOC107567243,LOC107670497 other upstream 777177 9010050 ~ 9012178 (+)
hbbe1.3 LOC107596825,LOC107596828,LOC107674643,LOC107754023,LOC107587921 other downstream 8651 9798815 ~ 9799796 (+)
G18574 LOC107568067,LOC107690317,LOC107733849 other downstream 235654 10025818 ~ 10103461 (+)
LOC122333995 LOC107561345,LOC107732849,LOC107680844,LOC107729518,LOC107551149,LOC107690331,LOC107732905,LOC107561346,LOC107551141 other downstream 901726 10691890 ~ 10698540 (+)
kcna7 LOC106518874,LOC108237811,LOC102213725,LOC102789930,LOC102292646,LOC101488024,LOC100711099,LOC105891650,LOC107729520,LOC107097254,LOC107551170,LOC102237047,LOC107551147,LOC107732850,LOC107729474,LOC107561361,LOC107680852,LOC108434931,LOC108278793 other downstream 962595 10752759 ~ 10842507 (+)
LOC122331261 cox6a2,LOC107564019,LOC107658449,LOC107674165,LOC107583062,LOC103367329 other downstream 1543577 11333741 ~ 11335825 (+)

Expression


Co-expression Network