LOC122331730


Basic Information

Item Value
gene id LOC122331730
gene name NA
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056701.1
NCBI id CM032070.1
chromosome length 30200998
location 7974543 ~ 7977890 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043229244.1
aatgtattatttatatcttttcTCTAATTGCTTTgattttatgttaataaaataatttataataatgtttcaattcatctttttttcttgaaaaatgtttaaaggcTAAAAATCGCTAAAGCTGATACCATTTGGATAAACCTTTTTGAATATGCCctttttaaataatcctctTAATTTGTTCTGTTGGTCACTAATAAAAAAGGACCTCTGTACGTTTTGTTTGTCACACATTTACAGACTGTGTAATTGACATGTCTACATTGGCTTGTTGGGATAATGTTTCTTTGCACTGACAACAATGTTTTCCTTCTGATTTAACATAACTGCGTAAGTTCATAGTTAATGAAATCtttgaaaacaaattacattagGAAGTTAAGACGGTGAAAAAGGTGTGAAGATGTGGATTAGTAATCTGGCCCCTGTGTTTGCTCTGCTCTTTTTTAGTCTTGCTGGCTGTAATCTCACTGCTCAGTGTTGTGTGAGTTTATCATCAGCTCTACAATCCTCAAACTGTGTCCTGaaagagctggatctgagtaGCAATGACCTGCAGGACTCTTGTGTAAAATTTATTTCTGATGGACTAAAGAGTCGTAACTGTCACCTGGAGATATTGAGGTTGTCAGGCTGTATGGTGACGGAGCAAGGCTGTGGttatttgtcttcagctctgagtgaaaacccctcacacctgagagagctggatctgagctacaatcatccaggagattcaggagtgcaGCTGCTCAAACACAAACTGGAGGATCCAGACTACAAACTGCAGATACTCAaTGTGGATCATGGAGGAGAGAACATGATGAGAGCGGGACTACGAAAGTATGCCTGTgatctcacactggatccaaacacagcaaaccCTCGACTCATTCTCTCTGAGGAGAACAGGAAGATCACATGTGTGAAAGATCATCAGCCGtgtcctgatcatccagacagatttgataaCGATCCTCAGATTCTGTGTGTTGAGAGTCTgactggacgctgttactgggagactgaaTGGAAGAGACGTGCCGAAATATCAGTGTCATACACAGCTATCAACAGGAAAGGAGGGAGTGAATGTGAGTTTGGATTCAATGACAGGTCCTGGAGTCTGAACTGCTCTGATAAATTCTCTGTCTGTCACAACAAGAACGTCACTGATATACCTGCTGTGTGTTCATCCTCTAGTAGAGCAGGAGTGTATGTGGACGTGTCGGCCggctctctgtccttctacagtgtctctgacacacacacactcacacacttacacacatttaaCACCACATTCACTGAAGCCCTCTGTGCTGGATTTAGAGTTGATTCTGATTGTTCGGTGTCTCTGTGTGATATCAAATGATTTAGAGTCTCTCTGTAAATCCTGATgttcacatgcacacaaacgTATCAAATCTCACAtcgttacatttatattcattcgtTATTAGTTATTCTTTGTCATCCACCACTTATAAATCTTGGTGAGACAAACATAATGTTCTGAATCTTTAAGAAAGTGGTGAATACGTTATCTTAAGTATTTGTACATTAAAAACcctgttaatttaaaaaaactagtGCCTAGATTTGCCTACATAATACAGTGATTCTGCAGTACACTTACTGTTATATgtaactgtttattattatacactaaACAGTACTGTACTGTAGAAAATATAAGATGTACAGCATAACACTTTAGGTGTTTGATTGTCATTATAAAGTTTTTGTATTACTACTATAATCTCAAACTTTATGACTATAACCTCTTCTTCTAAAAAGGCATGATCAGAATTAGCATTTCTATTAGAAACAAATATATGTAGAGTTACAAATAATCTATAATCCTCTTTGTATCATTTGACGTGTCCATGAAAACTGCAGTTTTAATCGATGCATAATCATGTGATGGATAGCAGTTGAAATGAGGGCTAGATATGTGACGTGTAGAATGAAAGCTTATGACATATGCCATGTCACGGTGTGAATGAATGTTCGTGATTTTGATTATGGGATGTAGGAAACATTCTATAAAGTAAAGGACATTGCCGAGATGCTATCTCTAAATGGGATGgaaagtttgttttgtgttttttgtaatttatgcaCGGAAGAAGAGCCGAACTGGGTTTAAACACCTTCGGGGCAAGCCCAAACCAGCTGTTTAAGACCTCAAAGCAAGAAGCTTTcgaggagagaaaaagaaaaggaagagtTTTTCTCCATCGGAACAGTGCTTACTCCATCGCTTCCGCTGTAACAACTCCACAATCCCTCTGTATGGAACGACTGGAAGCTGCCGCAACGTGAATCACTGACCTGCTCCAGCGTTCCTTCAGCGAGACCTCCATTGACCCTCTGCATCTTCAACTCTAGAAACTTCCAAAGCTGAGCAGCCCTACGACGAGAGACTGTCACGATCAAATCACCCTGGGAATCCCAAAGACGTTATCCAAGACGAGCGCCACAACCAATCAGAGAAGCCAGGATTCCCTCAGAGAAGCCAGCAATCAGTTTTGTTAACACAGACAAAGTTTCCCTCTCTTAACTCAGTGGTGCAAAGTGGAAAGCTAGGACCTCTGCTTTGATCAATATTTTGATCTTAGAACTAGCAAATAGACTTTGGGCTTCATTAATCAATTCCTTCCCAAACTGTTCGTATGCGTGTGTTCATTCTTAGCTTAGTCATGTTAGTGGAAGTAAAATTCAATAAACTTCAGTTATTAAGAGTC

Function

GO: NA

KEGG:

id description
ko03040 Spliceosome

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043229244.1 True 2750 mRNA 0.39 4 7974543 7977890

Neighbor

gene id symbol gene type direction distance location
ptger1c ptger1c,LOC107757344,LOC107567231,LOC107672434,LOC107670435,LOC107711161,LOC107587998 coding upstream 166781 7801296 ~ 7807762 (+)
LOC122334406 LOC107587953 coding upstream 177890 7786116 ~ 7796653 (+)
chmp6a chmp6a,LOC107744992,LOC107599353,LOC107711234,LOC107672453,LOC108432238 coding upstream 319353 7649629 ~ 7655190 (+)
ttyh2l ttyh2l,LOC107744973,LOC107670532,LOC107599325,LOC107711233,LOC107672455,LOC107587999 coding upstream 325597 7619650 ~ 7648946 (+)
hs3st3b1a hs3st3b1a,LOC107711227,LOC107672504,LOC107587963,LOC107599323,LOC107744967 coding upstream 600079 7362916 ~ 7374464 (+)
srebf2 LOC107574638,LOC107745393,LOC107721684,LOC107572757 coding downstream 177481 8155371 ~ 8166377 (+)
nol12 nol12,LOC107676179 coding downstream 200624 8178514 ~ 8181737 (+)
LOC122339678 NA coding downstream 206658 8184548 ~ 8189293 (+)
triobpb triobp,LOC107574640,LOC107721687,LOC107661081 coding downstream 211563 8189453 ~ 8200478 (+)
ndufa6 ndufa6 coding downstream 223709 8201599 ~ 8207081 (+)
G17976 LOC107744976,LOC107711219,LOC107599314 non-coding upstream 50914 7915862 ~ 7923629 (+)
G17973 LOC107693569,LOC107722887,LOC107673775,LOC107563216,LOC107599327,LOC107572241,LOC107693566,LOC107661871,LOC107661873,LOC107599328 non-coding upstream 74396 7899911 ~ 7900147 (+)
G17937 NA non-coding upstream 128498 7845224 ~ 7846045 (+)
G17936 si:dkey-210j14.3,LOC107672496,LOC107757375,LOC107711245,LOC107711244,LOC107670496 non-coding upstream 130326 7843581 ~ 7844217 (+)
G17934 NA non-coding upstream 131575 7842339 ~ 7842968 (+)
G17990 NA non-coding downstream 6590 7984480 ~ 8145025 (+)
G17993 LOC107566823,LOC107739961,LOC107574374,LOC107576777,LOC107659785,LOC107565530,LOC107742984,LOC107710146,LOC107725412,LOC107717634,LOC107655767,LOC107571898 non-coding downstream 11236 7989126 ~ 8092242 (+)
G17998 NA non-coding downstream 37747 8015637 ~ 8109769 (+)
G18016 NA non-coding downstream 125160 8103050 ~ 8103417 (+)
G18010 NA non-coding downstream 237362 8215252 ~ 8217217 (+)
G17988 si:dkey-182i3.10,LOC107718276,LOC107690448,LOC107683827 other upstream 8349 7964749 ~ 7966194 (+)
LOC122341279 LOC107730542,LOC107679029,LOC107563335 other upstream 11567 7960071 ~ 7962976 (+)
G17985 ighv4-5 other upstream 23179 7950854 ~ 7951364 (+)
LOC122331768 LOC107710248 other upstream 24126 7949761 ~ 7950417 (+)
LOC122341274 LOC107711242,LOC107672448,LOC107588011,LOC107757354,LOC107670494 other upstream 132874 7838956 ~ 7841669 (+)
G18008 LOC107572757,LOC107745393,LOC107676178,LOC107574638,LOC107690127 other downstream 78769 8056659 ~ 8059857 (+)
LOC122341282 LOC107690132,LOC107722730,LOC107572760 other downstream 172853 8150743 ~ 8152894 (+)
LOC122342110 wbp11,LOC107751605,LOC107678993 other downstream 282194 8260084 ~ 8563379 (+)
G18048 NA other downstream 535459 8513349 ~ 8742302 (+)
LOC122331854 mgp,LOC107574611,LOC107569876 other downstream 566401 8544291 ~ 8551151 (+)

Expression


Co-expression Network