LOC122331739


Basic Information

Item Value
gene id LOC122331739
gene name NA
gene type misc
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056701.1
NCBI id CM032070.1
chromosome length 30200998
location 8010976 ~ 8014701 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043229247.1
GAGGAAGACTGACAGAAAGAGAAGATGTCTGATAAGTGTGATCTGTGTCTGCTGGGactcatctttctctcttcactTCTCACAGGTATCAATGGAGTGGATGATCATGTGTTCATCAGTTCTGGTGAAAATGTCCGTCTGTCCTGTAATAATGCTCTTCATGACTGTAGATCAACTACATGGAACTATAACAGGTTCAGTCTCTCAGCAGCAGACGAACTGATTGGTGatggagaaaagaagaaagacatagAGAGACATGAGAGACTGAGTCTGGGGTCTGACTGCTCTCTGAACATCAAGAACATCACAGAAGAAGATTATGGACTGTATACCTGCAAGCAACAACAAACCAATGCTTACGTTTTTCTGCATGTTCTTCAGGtctcttcatcatcttcatcatcctcacagACTCTCTCCTGTCAGCTGTATGTGTACTTTACTGGATTCTCTTGTGATGATTGGATCAGATCTCAGAGAATTGAGGTGTTCTGGGTGAATCAGGCTGGTGTTAAACTGAAGAGATCAGACTCCAGAGATCAGATATTATTCTCATCAGATCACTGTATCATCAGACTGACTACAACACTCCTGAATGAAGATCTCTACAGAGAGTGGAGATGTGAAGTTACTCACAGAGATCAAGTCAAGACCTCAGTCACATACACTGTCAGGAGATCAGTCTCTTCTGTAGTGACGGTGGTTTCTGTTTCTGCCGCTGCGTTCGCTGCTCTCCTCGCCGCCGTTCTCTGCCTGATCTACAGGAAAAGAGCAGATATGAAAAGAGGGACTGGGCAGTCGGCGGTCAAAGGTGAGAACGAACACAAAGCGCTGTATGAAACAATCGACGTGTTGATTCCTGCTGCCGCTGGAGACCATGAGCGGACAGATGATGTGACGTATTCTGAAGTGTCTTCTTCCACtggaaagacagaaaaatcAGTCAGAGATGGTAATGATACAGTGACTTACGCGGCCATCAGATGAACAGAAAGCGAGTCTCAGAATGAAGTTCTCAAGAACACGAgcttcataaataaatgatt
>XR_006248283.1
GAGGAAGACTGACAGAAAGAGAAGATGTCTGATAAGTGTGATCTGTGTCTGCTGGGactcatctttctctcttcactTCTCACAGGTATCAATGGAGTGGATGATCATGTGTTCATCAGTTCTGGTGAAAATGTCCGTCTGTCCTGTAATAATGCTCTTCATGACTGTAGATCAACTACATGGAACTATAACAGGTTCAGTCTCTCAGCAGCAGACGAACTGATTGGTGatggagaaaagaagaaagacatagAGAGACATGAGAGACTGAGTCTGGGGTCTGACTGCTCTCTGAACATCAAGAACATCACAGAAGAAGATTATGGACTGTATACCTGCAAGCAACAACAAACCAATGCTTACGTTTTTCTGCATGTTCTTCAGGtctcttcatcatcttcatcatcctcacagACTCTCTCCTGTCAGCTGTATGTGTACTTTACTGGATTCTCTTGTGATGATTGGATCAGATCTCAGAGAATTGAGGTGTTCTGGGTGAATCAGGCTGGTGTTAAACTGAAGAGATCAGACTCCAGAGATCAGATATTATTCTCATCAGATCACTGTATCATCAGACTGACTACAACACTCCTGAATGAAGATCTCTACAGAGAGTGGAGATGTGAAGTTACTCACAGAGATCAAGTCAAGACCTCAGTCACATACACTGTCAGGAGATCAGaaggcggagctataaTTCTGGCTGTAGTGTTGTCTTATGGCCAATCAGAGAACACCTCGCTCTTtcagaacgatgagctttgcACAAATCGGCCCGTTttaggaggcggggcttagaggagaaacaaagatatacagtatgtggaaaataatgtgtttttttgcacgTTGCATTacactaaataaactaaataatgttctttttagctcCATCTTACGAGCTCTCCTTATAAATCATAGCATGTTTCAGATGATCAAAAGCACTGCTTGTGGTCTGTTCATAGTCTCTTCTGTAGTGACGGTGGTTTCTGTTTCTGCCGCTGCGTTCGCTGCTCTCCTCGCCGCCGTTCTCTGCCTGATCTACAGGAAAAGAGCAGATATGAAAAGAGGGACTGGGCAGTCGGCGGTCAAAGGTGAGAACGAACACAAAGCG
>XR_006248284.1
GAGGAAGACTGACAGAAAGAGAAGATGTCTGATAAGTGTGATCTGTGTCTGCTGGGactcatctttctctcttcactTCTCACAGGTATCAATGGAGTGGATGATCATGTGTTCATCAGTTCTGGTGAAAATGTCCGTCTGTCCTGTAATAATGCTCTTCATGACTGTAGATCAACTACATGGAACTATAACAGGTTCAGTCTCTCAGCAGCAGACGAACTGATTGGTGatggagaaaagaagaaagacatagAGAGACATGAGAGACTGAGTCTGGGGTCTGACTGCTCTCTGAACATCAAGAACATCACAGAAGAAGATTATGGACTGTATACCTGCAAGCAACAACAAACCAATGCTTACGTTTTTCTGCATGTTCTTCAGGtctcttcatcatcttcatcatcctcacagACTCTCTCCTGTCAGCTGTATGTGTACTTTACTGGATTCTCTTGTGATGATTGGATCAGATCTCAGAGAATTGAGGTGTTCTGGGTGAATCAGGCTGGTGTTAAACTGAAGAGATCAGACTCCAGAGATCAGATATTATTCTCATCAGATCACTGTATCATCAGACTGACTACAACACTCCTGAATGAAGATCTCTACAGAGAGTGGAGATGTGAAGTTACTCACAGAGATCAAGTCAAGACCTCAGTCACATACACTGTCAGGAGATCAGaaggcggagctataaTTCTGGCTGTAGTGTTGTCTTATGGCCAATCAGAGAACACCTCGCTCTTtcagaacgatgagctttgcACAAATCGGCCCGTTttaggaggcggggcttagaggagaaacaaagatatacaTCTCTTCTGTAGTGACGGTGGTTTCTGTTTCTGCCGCTGCGTTCGCTGCTCTCCTCGCCGCCGTTCTCTGCCTGATCTACAGGAAAAGAGCAGATATGAAAAGAGGGACTGGGCAGTCGGCGGTCAAAGGTGAGAACGA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043229247.1 False 1049 mRNA 0.44 8 8010976 8014701
XR_006248283.1 True 1117 transcript 0.43 6 8011441 8014701
XR_006248284.1 False 960 transcript 0.45 7 8011451 8014701

Neighbor

gene id symbol gene type direction distance location
LOC122331758 NA coding downstream 43105 7966808 ~ 7967871 (-)
LOC122331721 si:dkey-182i3.10,LOC107718276,LOC107690448,LOC107683827 coding downstream 44758 7964659 ~ 7966218 (-)
LOC122341277 NA coding downstream 116699 7890178 ~ 7894277 (-)
aatka aatka,LOC107711236,LOC107587956,LOC107670475,LOC107567236,LOC107757347 coding downstream 247652 7725703 ~ 7763324 (-)
sdk2a LOC107672436,LOC107744971 coding downstream 456528 7439251 ~ 7554448 (-)
LOC122331782 NA coding upstream 69668 8084369 ~ 8091624 (-)
irgf4 NA coding upstream 94356 8109057 ~ 8121029 (-)
LOC122334091 NA coding upstream 159335 8174036 ~ 8177995 (-)
LOC122331822 NA coding upstream 220198 8234899 ~ 8257213 (-)
LOC122341283 hebp1,LOC107670539,LOC107661078 coding upstream 287370 8302071 ~ 8305993 (-)
G18160 NA non-coding downstream 968 7990515 ~ 8010008 (-)
G18121 NA non-coding downstream 54252 7954482 ~ 7956724 (-)
G18120 ighv4-5 non-coding downstream 59308 7950861 ~ 7951668 (-)
LOC122331800 LOC107672496,LOC107711244 non-coding downstream 164931 7844349 ~ 7846045 (-)
G17967 LOC107757375,LOC107672496,LOC107670496,LOC107711245,LOC107711244,LOC107578720 non-coding downstream 166762 7843776 ~ 7844214 (-)
LOC122331807 NA non-coding upstream 8910 8023611 ~ 8024579 (-)
G18165 NA non-coding upstream 34270 8048971 ~ 8155592 (-)
LOC122331793 NA non-coding upstream 62173 8076874 ~ 8079500 (-)
G18147 NA non-coding upstream 143363 8158064 ~ 8211299 (-)
G18142 NA non-coding upstream 164562 8179263 ~ 8181729 (-)
LOC122341278 adgrl1,LOC107711219,LOC107599314,LOC107602690,LOC107661818,LOC107744976 other downstream 65003 7920404 ~ 7945973 (-)
LOC122331786 LOC107693569,LOC107722887,LOC107673775,LOC107563216,LOC107599327,LOC107572241,LOC107693566,LOC107661871,LOC107661873,LOC107599328 other downstream 97542 7896602 ~ 7913434 (-)
LOC122341856 LOC107711206,LOC107602719,LOC107661829,LOC107711209,LOC107711210,LOC107661830,LOC107599345,LOC107602722,LOC107728674 other downstream 1301595 6702503 ~ 6709381 (-)
crb3a crb3,crb3a,LOC107599343,LOC107602711 other downstream 1385445 6619217 ~ 6625531 (-)
LOC122341483 LOC107661847,LOC107711201,LOC107728682,LOC107670454,LOC107599341,LOC100536643,LOC107602685 other downstream 1396654 6607952 ~ 6614322 (-)
fam234b srebf2,fam234b,LOC107690127,LOC107676178,LOC107572757,LOC107745393,LOC107576065,LOC107574637,LOC107721680,LOC107714892 other upstream 39338 8054039 ~ 8218088 (-)
LOC122334075 NA other upstream 43930 8058631 ~ 8171661 (-)
LOC122339740 NA other upstream 192997 8207698 ~ 8209093 (-)
LOC122342198 NA other upstream 204201 8218902 ~ 8219055 (-)
fmc1 NA other upstream 294831 8309532 ~ 8398828 (-)

Expression


Co-expression Network