LOC122331758


Basic Information

Item Value
gene id LOC122331758
gene name NA
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056701.1
NCBI id CM032070.1
chromosome length 30200998
location 7966808 ~ 7967871 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043229265.1
CTTCACATGAGagtccacactggagagaaaccctTCAGCAGCGGGAAGACGTTCCCGAGCGCTTTAGACCTGAAGAATCACCTGACCGTTCACACCAAGGAGAAACCGCATTCGTGCCATTTGTGTGGAAACAGGTTTTCACATCGACAGAGTCTGAAAGAACACGAGAAAATACACAGCGGCGTGAGAGATCACGTTTGCTGCGCGTGCGAGAAGACCTTCACCACGGCGCAGTGTTTAAAACGacacgagaggatccacaccggagagaaaccctaCGAGTGTTCACACTGCCACAAGAGATTCAGAGACTCATCCAGCCTGAAGACACACGAGatgatccacaccggagagagaccGCACGCCTGCGACCAGTGCCAGAAGAGCTTCACACTGAAGGCGAGGCTCACGGACCACATGAgagtccacaccggagagaagcccttcaCCTGTGGACAGTGCTGGAAGAGTTTCTCGCTGTCCGGACACTTCAAGAAACACATGAACATCCACACCAGAGAGAAGCTCTACACCTGCGCTCGCTGCGGGAAGACGTTCCTGAGAGCTTCGTACCTGAAGCAGCACCAGACCGTTCACACCAAGGAGAAACCGCATTCCTGTGAGCTGTGCGGAAAGAGCTTTTCTCGTTTGGAGAATTTGAAAGTGCATCAGAAAACACACGCTGCGGTCAAAGAGTACGTGTGCTTCGAGTGCGAGAAGACCTTCACTACAGCGAGCCATTTGAAGCAGCACCAGAAGATCTCCGGAGAGAGACCTTACCAGTGTTCGCTCTGTGACAAGACATTCAGTCGGAGAGGAACCCTGAAAATACACCAGAGGACTCACTCCGGAGAGAGACCGTACGGCTGTGCTGCGTGCGGGAAGCGCTTCAATCACTCGTCTGCTCTTCACAAACACACTAAACACTGTCGTCTTCAGGTCCAGCTCTTTCAGGTTTGATGTGAGACATCCCCGGATGAGTGAATAAGTGAAGTCCTTTTACTTTGTTACTGTACTTAAGTGCATTTCTGTTtcctccttgtttaactgaagaaggTTTAGC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043229265.1 True 1063 mRNA 0.52 2 7966808 7967871

Neighbor

gene id symbol gene type direction distance location
LOC122331721 si:dkey-182i3.10,LOC107718276,LOC107690448,LOC107683827 coding downstream 590 7964659 ~ 7966218 (-)
LOC122341277 NA coding downstream 72531 7890178 ~ 7894277 (-)
aatka aatka,LOC107711236,LOC107587956,LOC107670475,LOC107567236,LOC107757347 coding downstream 203484 7725703 ~ 7763324 (-)
sdk2a LOC107672436,LOC107744971 coding downstream 412360 7439251 ~ 7554448 (-)
cdc42ep4a cdc42ep4a,LOC107672486,LOC107711229,LOC107587960,LOC107744970,LOC107670511,LOC107599324 coding downstream 530091 7419126 ~ 7436717 (-)
LOC122331782 NA coding upstream 116498 8084369 ~ 8091624 (-)
irgf4 NA coding upstream 141186 8109057 ~ 8121029 (-)
LOC122334091 NA coding upstream 206165 8174036 ~ 8177995 (-)
LOC122331822 NA coding upstream 267028 8234899 ~ 8257213 (-)
LOC122341283 hebp1,LOC107670539,LOC107661078 coding upstream 334200 8302071 ~ 8305993 (-)
G18121 NA non-coding downstream 10084 7954482 ~ 7956724 (-)
G18120 ighv4-5 non-coding downstream 15140 7950861 ~ 7951668 (-)
LOC122331800 LOC107672496,LOC107711244 non-coding downstream 120763 7844349 ~ 7846045 (-)
G17967 LOC107757375,LOC107672496,LOC107670496,LOC107711245,LOC107711244,LOC107578720 non-coding downstream 122594 7843776 ~ 7844214 (-)
G17966 NA non-coding downstream 123843 7842150 ~ 7842965 (-)
G18159 NA non-coding upstream 21857 7989728 ~ 8088721 (-)
G18160 NA non-coding upstream 22644 7990515 ~ 8010008 (-)
LOC122331807 NA non-coding upstream 55740 8023611 ~ 8024579 (-)
G18165 NA non-coding upstream 81100 8048971 ~ 8155592 (-)
LOC122331793 NA non-coding upstream 109003 8076874 ~ 8079500 (-)
LOC122341278 adgrl1,LOC107711219,LOC107599314,LOC107602690,LOC107661818,LOC107744976 other downstream 20835 7920404 ~ 7945973 (-)
LOC122331786 LOC107693569,LOC107722887,LOC107673775,LOC107563216,LOC107599327,LOC107572241,LOC107693566,LOC107661871,LOC107661873,LOC107599328 other downstream 53374 7896602 ~ 7913434 (-)
LOC122341856 LOC107711206,LOC107602719,LOC107661829,LOC107711209,LOC107711210,LOC107661830,LOC107599345,LOC107602722,LOC107728674 other downstream 1257427 6702503 ~ 6709381 (-)
crb3a crb3,crb3a,LOC107599343,LOC107602711 other downstream 1341277 6619217 ~ 6625531 (-)
LOC122341483 LOC107661847,LOC107711201,LOC107728682,LOC107670454,LOC107599341,LOC100536643,LOC107602685 other downstream 1352486 6607952 ~ 6614322 (-)
LOC122331739 NA other upstream 43105 8010976 ~ 8014701 (-)
fam234b srebf2,fam234b,LOC107690127,LOC107676178,LOC107572757,LOC107745393,LOC107576065,LOC107574637,LOC107721680,LOC107714892 other upstream 86168 8054039 ~ 8218088 (-)
LOC122334075 NA other upstream 90760 8058631 ~ 8171661 (-)
LOC122339740 NA other upstream 239827 8207698 ~ 8209093 (-)
LOC122342198 NA other upstream 251031 8218902 ~ 8219055 (-)

Expression


Co-expression Network