LOC122332118 (alkbh7,LOC107723204,LOC107690706)


Basic Information

Item Value
gene id LOC122332118
gene name alkbh7,LOC107723204,LOC107690706
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056701.1
NCBI id CM032070.1
chromosome length 30200998
location 12972477 ~ 12974627 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043229415.1
TCAAAATGGCGCCCTGTCAATGACAGTAATGACACTAGTAAGCTGAATATTGTGGATCTTTAAGTGCCATCGTATGTCCTCGACAAAATGACACTGCTAATTAGAGTATCGAAACAAGGACAGAGGAAAGCTTTCCATAATCCCTTACTGTATAGGTTTTTATCGGAGAGCACGGATTTACGAAAAGGCCCCGAGAGCAAAGAGGGCTGTAGTTGGTTGTACGGATCGTCGCAGGAAATTTTATCCGTAGTGCGTGGGCATGTTGAAGTTAGACATAATTTCATCAGCGAGGAAGAGGAGAATGCCCTTTTCAAAGAAGTGGAGACAGGACTTAGAAAAAAACGATACGAGTTTGACCACTGGGACGACGCTATTCATGGCTACAGGGAAACAGAGCGGCTGCAGTGGGGACTTAAGTGTGAAAGTATCCTAAAGCGGGTGAGAGAGGTAGCTTTTCCTGAAGGCAGTCCACTGCTTGGGCCAATTCATGTTCTGGACCTGGACAGAGAGGGCTATATCAAACCTCATATCGACAGTGTGAAGTTCTGTGGAAGCACTATTGCAGGACTGAGCCTTTTGTCCGATAGTGTGATGCGATTGGTCCCGGAAAACAAATCCACAGACTGGGTGGACTTGCTTCTGAGTCGGCGCtcactttatatattaaaGGATGACGCTCGATTTAAATTCACCCATGAAATCCTGAAAGAAGAAGAATCCTTTTTCTCAGGACGGAAGGTACCACGGCATCGCCGCATCTCTGTCATCTGCCGAAACCTGCCTGTTTAAAAGAACTGGACTGACCTTAGAACTCGTCTTCTAAAAGCTGTGACTTTTATGAGAATTGTTTATCTTTCAGTTAatcacacacaccaacacacacaaagtaGCTAAAAACGTATAAATCACATGCATTTTCTTGGAATACCTACAAAGAAACAACTGCTGAAAAACTTGAAATGGTGTGTTGGATTTATGAAAGGCAAAGTTTTGACTGATGCAatgcataatgtaaaataagtcAGGGAAAAGAATGTCTTTACaacaggggtgtcaaactcaattcctgttTAGgaagtttagattcaacccggctaaaacacatatactgtgtaagtctgaagtacttgattagctggatcaggtgtgtttaaataGGGTTGCATCTCAACTTTGCAGGGCTACGGCCCTCCaggagtttgacacccctgctttACAATgtctattaataaatatttttttgctat

Function

symbol description
alkbh7 Predicted to be involved in fatty acid metabolic process. Predicted to act upstream of or within cellular response to DNA damage stimulus and regulation of mitochondrial membrane permeability involved in programmed necrotic cell death. Predicted to be active in mitochondrial matrix. Orthologous to human ALKBH7 (alkB homolog 7).

NR:

description
PREDICTED: alpha-ketoglutarate-dependent dioxygenase alkB homolog 7, mitochondrial-like

GO: NA

KEGG:

id description
K10769 ALKBH7; alkylated DNA repair protein alkB homolog 7

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043229415.1 True 1247 mRNA 0.43 4 12972477 12974627

Neighbor

gene id symbol gene type direction distance location
LOC122332168 gtf2f1,LOC107737737 coding upstream 72261 12895326 ~ 12900216 (+)
alkbh7 NA coding upstream 200295 12770572 ~ 12772182 (+)
ier2a LOC107583095,LOC107690711,LOC107723203,LOC107571501,LOC107689702,LOC107737775 coding upstream 292720 12678396 ~ 12679757 (+)
LOC122329583 nacc1,LOC107690702,LOC103910274,LOC107737738,LOC107689628,LOC107554144,LOC107723200,LOC103025552 coding upstream 295814 12661681 ~ 12676663 (+)
mpp2a mpp2a,LOC107582977,LOC107758486,LOC107737744,LOC108434916,LOC106600860,LOC106607467 coding upstream 482415 12477842 ~ 12490062 (+)
aldh3b1 aldh3b1,LOC107698763,LOC107601228,LOC108444046,LOC108258475 coding downstream 128649 13103276 ~ 13107847 (+)
carm1 carm1,LOC107698604,LOC107689626,LOC107753277,LOC107724424 coding downstream 141404 13116031 ~ 13129608 (+)
timm29 zgc:110046,LOC107736790,LOC107601237,LOC107698646,LOC107753167,LOC107689699,LOC107578239 coding downstream 160043 13134670 ~ 13136750 (+)
slc25a23b slc25a23b,LOC107601238,LOC107698653,LOC107724434,LOC107689624,LOC107753149,LOC105898533,LOC108444036 coding downstream 179880 13154507 ~ 13162307 (+)
znf207a znf207a,LOC107590415,LOC107698690,LOC107601239,LOC107689623 coding downstream 189369 13163996 ~ 13170254 (+)
G19575 LOC107690704 non-coding upstream 286106 12682818 ~ 12686371 (+)
G19579 NA non-coding upstream 290912 12681258 ~ 12681565 (+)
G19287 NA non-coding upstream 743957 12227935 ~ 12228520 (+)
G19274 NA non-coding upstream 837520 12132629 ~ 12134957 (+)
G19263 NA non-coding upstream 853702 12118538 ~ 12118775 (+)
G19656 NA non-coding downstream 22590 12997217 ~ 13056733 (+)
G19629 ighv4-5 non-coding downstream 31183 13005810 ~ 13096854 (+)
G19627 NA non-coding downstream 85533 13060160 ~ 13061606 (+)
G19636 NA non-coding downstream 86490 13061117 ~ 13072599 (+)
G19624 NA non-coding downstream 97506 13072133 ~ 13076694 (+)
gtpbp1 gtpbp1,LOC107554141,LOC107737742,LOC107582974 other upstream 443674 12519837 ~ 12528803 (+)
G19326 NA other upstream 458756 12511926 ~ 12513721 (+)
nbr1b LOC107658519,LOC107729513,LOC107689639,LOC107737750,LOC107554134,LOC555713 other upstream 657431 12303364 ~ 12315046 (+)
LOC122341822 LOC107582992,LOC107729455,LOC107554125,LOC107737756,LOC107689687 other upstream 722480 12232427 ~ 12249997 (+)
pax10 pax10,LOC107554109,LOC107658497,LOC107730756 other upstream 854538 12114048 ~ 12117939 (+)
si:dkey-204f11.64 LOC105898698 other downstream 137850 13112477 ~ 13114856 (+)
rbbp6 rbbp6,LOC107689611,LOC107710004,LOC107590402,LOC107601255,LOC107688097,LOC107720072 other downstream 723910 13698537 ~ 13710865 (+)
slc16a3a si:ch211-234h8.7,slc16a3,LOC107720094,LOC107688105,LOC107590394 other downstream 1021334 13995961 ~ 14002378 (+)
G19973 NA other downstream 1074863 14049490 ~ 14053032 (+)
G20015 cog1,LOC107721521,LOC107601277,LOC107654497,LOC107590385,LOC107688115,LOC107719994 other downstream 1143840 14118467 ~ 14119570 (+)

Expression


Co-expression Network