LOC122332149


Basic Information

Item Value
gene id LOC122332149
gene name NA
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056701.1
NCBI id CM032070.1
chromosome length 30200998
location 13083209 ~ 13083734 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043229457.1
TGCAAATCAAAAccgtgaatgtgtgtttagTATTTATGTGCCGCTGACTGGATCTGAAGTGTTACATCACCACTTTCAAGATGAAGAGTGCACTCTGTTTACTGCTGCTCTCATTCAGCTTACAACGTACAAAATGTCAAAGTATGGAGTCCATTGAAAGCACAGTAGTGAAAAAGCCTGGAGAAACTCTGGCTCTGTCCTGTAGAGGATCTGGGTTCAGCTTTAGCTGCTGTAGCATGCACTGGATCAGACAACAAGCTGGAAAACCCCTTGTGTGGATGGGACGTGTTCATAGTGGTGGCAGCGGCAATGACTACTCTGACTCTTTCAACAGACGAATTGAAATCACCAGAGATAATTCAAAGAATATGGTTTATCTGAAACTATCAGGCCTGACAGCAGAAGACTCAGCCgtgtatttttgtgcaaagCAAGCACAGTGA

Function

GO:

id name namespace
GO:0016021 integral component of membrane cellular_component

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043229457.1 True 443 mRNA 0.44 2 13083209 13083734

Neighbor

gene id symbol gene type direction distance location
LOC122332129 NA coding downstream 32348 13050286 ~ 13050861 (-)
LOC122331939 NA coding downstream 90880 12987350 ~ 12992329 (-)
LOC122331923 NA coding downstream 96005 12981087 ~ 12987204 (-)
LOC122332086 gtf2f1,LOC107737737 coding downstream 103116 12974708 ~ 12980093 (-)
LOC122329559 LOC107582973,LOC107723206,LOC107554143,LOC107695115,LOC107689629,LOC107737739,LOC796777,LOC108436680 coding downstream 421361 12571028 ~ 12661848 (-)
LOC122341303 NA coding upstream 292 13084026 ~ 13084966 (-)
LOC122332140 ighm,ighv5-5,ighv5-4,ighv5-8 coding upstream 2641 13086375 ~ 13087267 (-)
LOC122341304 LOC107710248 coding upstream 8476 13092210 ~ 13092846 (-)
LOC122341774 NA coding upstream 13395 13097129 ~ 13100644 (-)
LOC122341259 clpp,LOC107753176,LOC107590418,LOC107689627,LOC107724426,LOC107698620,LOC107601229 coding upstream 24097 13107831 ~ 13111379 (-)
LOC122332138 ighv5-5,ighm,ighv5-4,ighv5-8 non-coding downstream 2588 13080070 ~ 13080621 (-)
LOC122332187 NA non-coding downstream 10381 13072560 ~ 13072828 (-)
G19672 alkbh7,LOC107723204,LOC107690706 non-coding downstream 180299 12900781 ~ 12902910 (-)
G19677 LOC107737766 non-coding downstream 196255 12864310 ~ 12886954 (-)
LOC122332655 NA non-coding downstream 787786 12294140 ~ 12295423 (-)
G19703 ighv6-1 non-coding upstream 6937 13090671 ~ 13091152 (-)
G19726 NA non-coding upstream 41787 13125521 ~ 13129608 (-)
G19811 NA non-coding upstream 273845 13357579 ~ 13357789 (-)
G19872 NA non-coding upstream 549825 13633559 ~ 13633785 (-)
G19947 NA non-coding upstream 813897 13897631 ~ 13898932 (-)
G19676 LOC107690708 other downstream 15019 13005996 ~ 13068190 (-)
G19700 NA other downstream 35715 13047041 ~ 13047494 (-)
cacna1aa LOC107690704,LOC107571502 other downstream 320119 12681990 ~ 12763090 (-)
G19606 LOC107583095,LOC107690711,LOC107723203,LOC107571501,LOC107689702,LOC107737775 other downstream 403409 12622783 ~ 12679800 (-)
LOC122342093 LOC107583078,LOC107754431,LOC107583076 other downstream 739337 12339187 ~ 12343872 (-)
gng13b NA other upstream 702275 13786009 ~ 13792602 (-)
G19933 NA other upstream 721634 13805368 ~ 13805978 (-)
si:dkeyp-72e1.6 si:dkeyp-72e1.6,LOC107721468,LOC108274424,LOC108438007,LOC103040592 other upstream 1119196 14202930 ~ 14204350 (-)
mlx mlx,LOC107601295,LOC107721525,LOC107720011,LOC107590371,LOC107688133,LOC107654516 other upstream 1351413 14435147 ~ 14439541 (-)
plcd3a plcd3,plcd3a,LOC107591554,LOC107581738,LOC107738025,LOC107654535,LOC107674588,LOC108432051,LOC106607244 other upstream 2037072 15120806 ~ 15179359 (-)

Expression


Co-expression Network